Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A39:A10
Extra
PDB:
ATOM 1 O3' C A 38 21.559 16.258 10.903 1.00 17.45 O
ATOM 2 P C A 39 22.305 17.435 11.741 1.00 20.49 P
ATOM 3 OP1 C A 39 21.325 18.517 12.085 1.00 24.43 O
ATOM 4 OP2 C A 39 23.512 17.794 10.991 1.00 22.51 O
ATOM 5 O5' C A 39 22.926 16.655 12.998 1.00 23.22 O
ATOM 6 C5' C A 39 22.304 16.618 14.248 1.00 20.44 C
ATOM 7 C4' C A 39 22.299 15.199 14.853 1.00 16.62 C
ATOM 8 O4' C A 39 21.619 14.289 13.954 1.00 13.18 O
ATOM 9 C3' C A 39 23.510 14.352 15.283 1.00 15.61 C
ATOM 10 O3' C A 39 24.117 14.814 16.513 1.00 15.53 O
ATOM 11 C2' C A 39 22.766 13.054 15.620 1.00 13.43 C
ATOM 12 O2' C A 39 22.037 13.231 16.823 1.00 10.21 O
ATOM 13 C1' C A 39 21.731 12.976 14.489 1.00 12.97 C
ATOM 14 N1 C A 39 22.153 12.031 13.438 1.00 11.15 N
ATOM 15 C2 C A 39 22.102 10.675 13.741 1.00 11.28 C
ATOM 16 O2 C A 39 21.721 10.338 14.877 1.00 10.76 O
ATOM 17 N3 C A 39 22.477 9.762 12.803 1.00 11.24 N
ATOM 18 C4 C A 39 22.895 10.172 11.606 1.00 11.60 C
ATOM 19 N4 C A 39 23.244 9.240 10.718 1.00 10.41 N
ATOM 20 C5 C A 39 22.965 11.562 11.266 1.00 11.08 C
ATOM 21 C6 C A 39 22.582 12.450 12.207 1.00 9.08 C
ATOM 22 P G A 40 25.594 14.295 16.976 1.00 13.05 P
ATOM 23 OP1 G A 40 25.962 15.246 18.039 1.00 12.26 O
ATOM 24 OP2 G A 40 26.496 14.069 15.850 1.00 11.41 O
ATOM 25 O5' G A 40 25.399 12.866 17.663 1.00 10.95 O
TER
ATOM 1 O3' A B 9 21.369 11.351 7.801 1.00 13.11 O
ATOM 2 P U B 10 22.931 11.117 7.493 1.00 14.31 P
ATOM 3 OP1 U B 10 23.384 9.774 7.967 1.00 13.12 O
ATOM 4 OP2 U B 10 23.680 12.330 7.933 1.00 15.11 O
ATOM 5 O5' U B 10 22.966 11.182 5.904 1.00 12.37 O
ATOM 6 C5' U B 10 22.889 9.987 5.117 1.00 15.75 C
ATOM 7 C4' U B 10 22.394 10.314 3.715 1.00 14.54 C
ATOM 8 O4' U B 10 21.019 10.786 3.786 1.00 14.76 O
ATOM 9 C3' U B 10 23.144 11.444 3.031 1.00 15.39 C
ATOM 10 O3' U B 10 24.331 10.949 2.403 1.00 15.75 O
ATOM 11 C2' U B 10 22.114 11.959 2.027 1.00 15.07 C
ATOM 12 O2' U B 10 22.016 11.123 0.889 1.00 14.04 O
ATOM 13 C1' U B 10 20.817 11.819 2.831 1.00 14.18 C
ATOM 14 N1 U B 10 20.412 13.042 3.549 1.00 10.89 N
ATOM 15 C2 U B 10 19.972 14.094 2.797 1.00 12.58 C
ATOM 16 O2 U B 10 19.917 14.051 1.569 1.00 14.81 O
ATOM 17 N3 U B 10 19.592 15.206 3.514 1.00 12.69 N
ATOM 18 C4 U B 10 19.611 15.359 4.880 1.00 14.17 C
ATOM 19 O4 U B 10 19.271 16.439 5.374 1.00 13.94 O
ATOM 20 C5 U B 10 20.084 14.211 5.598 1.00 13.87 C
ATOM 21 C6 U B 10 20.460 13.117 4.917 1.00 13.05 C
ATOM 22 P C B 11 25.693 11.790 2.524 1.00 17.71 P
ATOM 23 OP1 C B 11 26.754 11.081 1.752 1.00 17.41 O
ATOM 24 OP2 C B 11 25.922 12.133 3.943 1.00 15.48 O
ATOM 25 O5' C B 11 25.352 13.145 1.775 1.00 15.22 O
TER
ATOM 2 P C A 39 22.305 17.435 11.741 1.00 20.49 P
ATOM 3 OP1 C A 39 21.325 18.517 12.085 1.00 24.43 O
ATOM 4 OP2 C A 39 23.512 17.794 10.991 1.00 22.51 O
ATOM 5 O5' C A 39 22.926 16.655 12.998 1.00 23.22 O
ATOM 6 C5' C A 39 22.304 16.618 14.248 1.00 20.44 C
ATOM 7 C4' C A 39 22.299 15.199 14.853 1.00 16.62 C
ATOM 8 O4' C A 39 21.619 14.289 13.954 1.00 13.18 O
ATOM 9 C3' C A 39 23.510 14.352 15.283 1.00 15.61 C
ATOM 10 O3' C A 39 24.117 14.814 16.513 1.00 15.53 O
ATOM 11 C2' C A 39 22.766 13.054 15.620 1.00 13.43 C
ATOM 12 O2' C A 39 22.037 13.231 16.823 1.00 10.21 O
ATOM 13 C1' C A 39 21.731 12.976 14.489 1.00 12.97 C
ATOM 14 N1 C A 39 22.153 12.031 13.438 1.00 11.15 N
ATOM 15 C2 C A 39 22.102 10.675 13.741 1.00 11.28 C
ATOM 16 O2 C A 39 21.721 10.338 14.877 1.00 10.76 O
ATOM 17 N3 C A 39 22.477 9.762 12.803 1.00 11.24 N
ATOM 18 C4 C A 39 22.895 10.172 11.606 1.00 11.60 C
ATOM 19 N4 C A 39 23.244 9.240 10.718 1.00 10.41 N
ATOM 20 C5 C A 39 22.965 11.562 11.266 1.00 11.08 C
ATOM 21 C6 C A 39 22.582 12.450 12.207 1.00 9.08 C
ATOM 22 P G A 40 25.594 14.295 16.976 1.00 13.05 P
ATOM 23 OP1 G A 40 25.962 15.246 18.039 1.00 12.26 O
ATOM 24 OP2 G A 40 26.496 14.069 15.850 1.00 11.41 O
ATOM 25 O5' G A 40 25.399 12.866 17.663 1.00 10.95 O
TER
ATOM 1 O3' A B 9 21.369 11.351 7.801 1.00 13.11 O
ATOM 2 P U B 10 22.931 11.117 7.493 1.00 14.31 P
ATOM 3 OP1 U B 10 23.384 9.774 7.967 1.00 13.12 O
ATOM 4 OP2 U B 10 23.680 12.330 7.933 1.00 15.11 O
ATOM 5 O5' U B 10 22.966 11.182 5.904 1.00 12.37 O
ATOM 6 C5' U B 10 22.889 9.987 5.117 1.00 15.75 C
ATOM 7 C4' U B 10 22.394 10.314 3.715 1.00 14.54 C
ATOM 8 O4' U B 10 21.019 10.786 3.786 1.00 14.76 O
ATOM 9 C3' U B 10 23.144 11.444 3.031 1.00 15.39 C
ATOM 10 O3' U B 10 24.331 10.949 2.403 1.00 15.75 O
ATOM 11 C2' U B 10 22.114 11.959 2.027 1.00 15.07 C
ATOM 12 O2' U B 10 22.016 11.123 0.889 1.00 14.04 O
ATOM 13 C1' U B 10 20.817 11.819 2.831 1.00 14.18 C
ATOM 14 N1 U B 10 20.412 13.042 3.549 1.00 10.89 N
ATOM 15 C2 U B 10 19.972 14.094 2.797 1.00 12.58 C
ATOM 16 O2 U B 10 19.917 14.051 1.569 1.00 14.81 O
ATOM 17 N3 U B 10 19.592 15.206 3.514 1.00 12.69 N
ATOM 18 C4 U B 10 19.611 15.359 4.880 1.00 14.17 C
ATOM 19 O4 U B 10 19.271 16.439 5.374 1.00 13.94 O
ATOM 20 C5 U B 10 20.084 14.211 5.598 1.00 13.87 C
ATOM 21 C6 U B 10 20.460 13.117 4.917 1.00 13.05 C
ATOM 22 P C B 11 25.693 11.790 2.524 1.00 17.71 P
ATOM 23 OP1 C B 11 26.754 11.081 1.752 1.00 17.41 O
ATOM 24 OP2 C B 11 25.922 12.133 3.943 1.00 15.48 O
ATOM 25 O5' C B 11 25.352 13.145 1.775 1.00 15.22 O
TER
Atoms:
C2: (22.102,10.675,13.741)
OP1: (21.325,18.517,12.085)
OP2: (23.512,17.794,10.991)
C4: (22.895,10.172,11.606)
O5': (22.926,16.655,12.998)
C3': (23.510,14.352,15.283)
C1': (21.731,12.976,14.489)
O4': (21.619,14.289,13.954)
C5': (22.304,16.618,14.248)
P: (22.305,17.435,11.741)
O2: (21.721,10.338,14.877)
C4': (22.299,15.199,14.853)
C2': (22.766,13.054,15.620)
O2': (22.037,13.231,16.823)
N1: (22.153,12.031,13.438)
N3: (22.477,9.762,12.803)
N4: (23.244,9.240,10.718)
C6: (22.582,12.450,12.207)
C5: (22.965,11.562,11.266)
O3': (24.117,14.814,16.513)
OP1: (21.325,18.517,12.085)
OP2: (23.512,17.794,10.991)
C4: (22.895,10.172,11.606)
O5': (22.926,16.655,12.998)
C3': (23.510,14.352,15.283)
C1': (21.731,12.976,14.489)
O4': (21.619,14.289,13.954)
C5': (22.304,16.618,14.248)
P: (22.305,17.435,11.741)
O2: (21.721,10.338,14.877)
C4': (22.299,15.199,14.853)
C2': (22.766,13.054,15.620)
O2': (22.037,13.231,16.823)
N1: (22.153,12.031,13.438)
N3: (22.477,9.762,12.803)
N4: (23.244,9.240,10.718)
C6: (22.582,12.450,12.207)
C5: (22.965,11.562,11.266)
O3': (24.117,14.814,16.513)
C4: (19.611,15.359,4.880)
N3: (19.592,15.206,3.514)
OP1: (23.384,9.774,7.967)
OP2: (23.680,12.330,7.933)
C2: (19.972,14.094,2.797)
C1': (20.817,11.819,2.831)
C3': (23.144,11.444,3.031)
O5': (22.966,11.182,5.904)
O4': (21.019,10.786,3.786)
C5': (22.889,9.987,5.117)
P: (22.931,11.117,7.493)
C4': (22.394,10.314,3.715)
C2': (22.114,11.959,2.027)
O2': (22.016,11.123,0.889)
N1: (20.412,13.042,3.549)
O4: (19.271,16.439,5.374)
O2: (19.917,14.051,1.569)
C6: (20.460,13.117,4.917)
C5: (20.084,14.211,5.598)
O3': (24.331,10.949,2.403)
N3: (19.592,15.206,3.514)
OP1: (23.384,9.774,7.967)
OP2: (23.680,12.330,7.933)
C2: (19.972,14.094,2.797)
C1': (20.817,11.819,2.831)
C3': (23.144,11.444,3.031)
O5': (22.966,11.182,5.904)
O4': (21.019,10.786,3.786)
C5': (22.889,9.987,5.117)
P: (22.931,11.117,7.493)
C4': (22.394,10.314,3.715)
C2': (22.114,11.959,2.027)
O2': (22.016,11.123,0.889)
N1: (20.412,13.042,3.549)
O4: (19.271,16.439,5.374)
O2: (19.917,14.051,1.569)
C6: (20.460,13.117,4.917)
C5: (20.084,14.211,5.598)
O3': (24.331,10.949,2.403)
Image (generated by PyMOL):