ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2NZ4:Q101:Q100

Extra

PDB:
ATOM 1 O3' U A 100 9.196 22.549 41.951 1.00 38.97 O
ATOM 2 P C A 101 8.828 21.035 41.564 1.00 38.02 P
ATOM 3 OP1 C A 101 9.690 20.170 42.364 1.00 38.90 O
ATOM 4 OP2 C A 101 8.893 20.874 40.094 1.00 39.42 O
ATOM 5 O5' C A 101 7.288 20.888 41.999 1.00 39.31 O
ATOM 6 C5' C A 101 6.846 21.229 43.278 1.00 41.39 C
ATOM 7 C4' C A 101 5.325 21.223 43.375 1.00 43.83 C
ATOM 8 O4' C A 101 4.741 22.405 42.767 1.00 45.22 O
ATOM 9 C3' C A 101 4.596 20.069 42.701 1.00 45.65 C
ATOM 10 O3' C A 101 4.557 18.958 43.577 1.00 47.40 O
ATOM 11 C2' C A 101 3.201 20.637 42.488 1.00 45.98 C
ATOM 12 O2' C A 101 2.415 20.577 43.665 1.00 45.84 O
ATOM 13 C1' C A 101 3.544 22.068 42.087 1.00 44.93 C
ATOM 14 N1 C A 101 3.787 22.220 40.636 1.00 44.11 N
ATOM 15 C2 C A 101 2.725 22.217 39.731 1.00 45.13 C
ATOM 16 O2 C A 101 1.572 22.094 40.158 1.00 45.89 O
ATOM 17 N3 C A 101 2.983 22.363 38.406 1.00 44.34 N
ATOM 18 C4 C A 101 4.234 22.500 37.978 1.00 43.33 C
ATOM 19 N4 C A 101 4.466 22.639 36.680 1.00 43.73 N
ATOM 20 C5 C A 101 5.321 22.499 38.878 1.00 44.83 C
ATOM 21 C6 C A 101 5.056 22.353 40.180 1.00 44.51 C
ATOM 22 P A A 102 4.994 17.503 43.076 1.00 48.41 P
ATOM 23 OP1 A A 102 4.876 16.691 44.320 1.00 47.31 O
ATOM 24 OP2 A A 102 6.292 17.565 42.350 1.00 45.76 O
ATOM 25 O5' A A 102 3.833 17.140 42.028 1.00 47.13 O
TER

ATOM 1 O3' A B 99 9.420 24.886 35.982 1.00 36.19 O
ATOM 2 P U B 100 8.847 23.571 36.638 1.00 34.20 P
ATOM 3 OP1 U B 100 9.866 22.513 36.451 1.00 34.34 O
ATOM 4 OP2 U B 100 7.478 23.432 36.076 1.00 36.19 O
ATOM 5 O5' U B 100 8.684 23.970 38.184 1.00 35.73 O
ATOM 6 C5' U B 100 9.800 24.031 39.075 1.00 36.93 C
ATOM 7 C4' U B 100 9.448 24.534 40.468 1.00 37.11 C
ATOM 8 O4' U B 100 8.692 25.760 40.355 1.00 38.46 O
ATOM 9 C3' U B 100 8.526 23.669 41.317 1.00 38.79 C
ATOM 10 O3' U B 100 9.196 22.549 41.951 1.00 38.97 O
ATOM 11 C2' U B 100 8.047 24.717 42.314 1.00 38.90 C
ATOM 12 O2' U B 100 9.044 25.080 43.246 1.00 41.00 O
ATOM 13 C1' U B 100 7.756 25.904 41.411 1.00 38.50 C
ATOM 14 N1 U B 100 6.366 25.910 40.901 1.00 38.32 N
ATOM 15 C2 U B 100 5.336 26.107 41.794 1.00 38.76 C
ATOM 16 O2 U B 100 5.513 26.298 42.979 1.00 39.40 O
ATOM 17 N3 U B 100 4.072 26.073 41.259 1.00 38.83 N
ATOM 18 C4 U B 100 3.739 25.878 39.927 1.00 38.74 C
ATOM 19 O4 U B 100 2.560 25.879 39.584 1.00 39.03 O
ATOM 20 C5 U B 100 4.856 25.686 39.045 1.00 38.27 C
ATOM 21 C6 U B 100 6.097 25.702 39.557 1.00 39.03 C
ATOM 22 P C B 101 8.828 21.035 41.564 1.00 38.02 P
ATOM 23 OP1 C B 101 9.690 20.170 42.364 1.00 38.90 O
ATOM 24 OP2 C B 101 8.893 20.874 40.094 1.00 39.42 O
ATOM 25 O5' C B 101 7.288 20.888 41.999 1.00 39.31 O
TER

Atoms:
C2: (2.725,22.217,39.731)
OP1: (9.690,20.170,42.364)
OP2: (8.893,20.874,40.094)
C4: (4.234,22.500,37.978)
O5': (7.288,20.888,41.999)
C3': (4.596,20.069,42.701)
C1': (3.544,22.068,42.087)
O4': (4.741,22.405,42.767)
C5': (6.846,21.229,43.278)
P: (8.828,21.035,41.564)
O2: (1.572,22.094,40.158)
C4': (5.325,21.223,43.375)
C2': (3.201,20.637,42.488)
O2': (2.415,20.577,43.665)
N1: (3.787,22.220,40.636)
N3: (2.983,22.363,38.406)
N4: (4.466,22.639,36.680)
C6: (5.056,22.353,40.180)
C5: (5.321,22.499,38.878)
O3': (4.557,18.958,43.577)
C4: (3.739,25.878,39.927)
N3: (4.072,26.073,41.259)
OP1: (9.866,22.513,36.451)
OP2: (7.478,23.432,36.076)
C2: (5.336,26.107,41.794)
C1': (7.756,25.904,41.411)
C3': (8.526,23.669,41.317)
O5': (8.684,23.970,38.184)
O4': (8.692,25.760,40.355)
C5': (9.800,24.031,39.075)
P: (8.847,23.571,36.638)
C4': (9.448,24.534,40.468)
C2': (8.047,24.717,42.314)
O2': (9.044,25.080,43.246)
N1: (6.366,25.910,40.901)
O4: (2.560,25.879,39.584)
O2: (5.513,26.298,42.979)
C6: (6.097,25.702,39.557)
C5: (4.856,25.686,39.045)
O3': (9.196,22.549,41.951)
Image (generated by PyMOL):
PyMOL image
show in jmol