Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0127:0126
Extra
PDB:
ATOM 1 O3' U A 126 94.267 145.820 6.976 1.00 88.05 O
ATOM 2 P C A 127 95.584 145.358 7.768 1.00 88.42 P
ATOM 3 OP1 C A 127 96.343 146.599 8.074 1.00 87.59 O
ATOM 4 OP2 C A 127 96.239 144.274 6.987 1.00 87.96 O
ATOM 5 O5' C A 127 95.037 144.758 9.143 1.00 87.81 O
ATOM 6 C5' C A 127 94.424 145.607 10.139 1.00 83.57 C
ATOM 7 C4' C A 127 94.853 145.182 11.528 1.00 80.91 C
ATOM 8 O4' C A 127 94.384 143.826 11.773 1.00 80.58 O
ATOM 9 C3' C A 127 96.359 145.164 11.790 1.00 79.55 C
ATOM 10 O3' C A 127 96.638 145.508 13.148 1.00 76.28 O
ATOM 11 C2' C A 127 96.717 143.702 11.553 1.00 79.90 C
ATOM 12 O2' C A 127 97.884 143.288 12.236 1.00 81.30 O
ATOM 13 C1' C A 127 95.480 142.996 12.102 1.00 80.29 C
ATOM 14 N1 C A 127 95.264 141.672 11.493 1.00 80.43 N
ATOM 15 C2 C A 127 95.663 140.525 12.199 1.00 80.13 C
ATOM 16 O2 C A 127 96.161 140.651 13.332 1.00 79.18 O
ATOM 17 N3 C A 127 95.495 139.310 11.628 1.00 80.92 N
ATOM 18 C4 C A 127 94.947 139.213 10.411 1.00 81.75 C
ATOM 19 N4 C A 127 94.804 137.992 9.882 1.00 82.63 N
ATOM 20 C5 C A 127 94.523 140.361 9.681 1.00 81.20 C
ATOM 21 C6 C A 127 94.697 141.556 10.253 1.00 80.75 C
ATOM 22 P G A 128 96.867 147.048 13.549 1.00 73.90 P
ATOM 23 OP1 G A 128 97.790 147.666 12.555 1.00 73.90 O
ATOM 24 OP2 G A 128 97.198 147.109 14.996 1.00 73.20 O
ATOM 25 O5' G A 128 95.429 147.688 13.326 1.00 69.43 O
TER
ATOM 1 O3' U B 125 91.513 139.913 6.794 1.00 68.14 O
ATOM 2 P U B 126 92.984 140.276 6.224 1.00 72.30 P
ATOM 3 OP1 U B 126 92.871 140.164 4.753 1.00 71.62 O
ATOM 4 OP2 U B 126 94.003 139.460 6.938 1.00 71.50 O
ATOM 5 O5' U B 126 93.201 141.819 6.604 1.00 77.00 O
ATOM 6 C5' U B 126 94.009 142.706 5.767 1.00 83.12 C
ATOM 7 C4' U B 126 93.326 144.058 5.582 1.00 87.68 C
ATOM 8 O4' U B 126 91.974 143.832 5.111 1.00 91.12 O
ATOM 9 C3' U B 126 93.158 144.931 6.823 1.00 89.62 C
ATOM 10 O3' U B 126 94.267 145.820 6.976 1.00 88.05 O
ATOM 11 C2' U B 126 91.943 145.796 6.481 1.00 92.79 C
ATOM 12 O2' U B 126 92.256 146.985 5.780 1.00 94.83 O
ATOM 13 C1' U B 126 91.130 144.878 5.562 1.00 95.17 C
ATOM 14 N1 U B 126 89.893 144.295 6.113 1.00100.62 N
ATOM 15 C2 U B 126 89.204 143.372 5.323 1.00103.44 C
ATOM 16 O2 U B 126 89.566 143.052 4.191 1.00103.45 O
ATOM 17 N3 U B 126 88.071 142.845 5.906 1.00105.23 N
ATOM 18 C4 U B 126 87.555 143.144 7.159 1.00105.33 C
ATOM 19 O4 U B 126 86.534 142.569 7.550 1.00105.98 O
ATOM 20 C5 U B 126 88.308 144.115 7.899 1.00104.37 C
ATOM 21 C6 U B 126 89.421 144.641 7.369 1.00102.60 C
ATOM 22 P C B 127 95.584 145.358 7.768 1.00 88.42 P
ATOM 23 OP1 C B 127 96.343 146.599 8.074 1.00 87.59 O
ATOM 24 OP2 C B 127 96.239 144.274 6.987 1.00 87.96 O
ATOM 25 O5' C B 127 95.037 144.758 9.143 1.00 87.81 O
TER
ATOM 2 P C A 127 95.584 145.358 7.768 1.00 88.42 P
ATOM 3 OP1 C A 127 96.343 146.599 8.074 1.00 87.59 O
ATOM 4 OP2 C A 127 96.239 144.274 6.987 1.00 87.96 O
ATOM 5 O5' C A 127 95.037 144.758 9.143 1.00 87.81 O
ATOM 6 C5' C A 127 94.424 145.607 10.139 1.00 83.57 C
ATOM 7 C4' C A 127 94.853 145.182 11.528 1.00 80.91 C
ATOM 8 O4' C A 127 94.384 143.826 11.773 1.00 80.58 O
ATOM 9 C3' C A 127 96.359 145.164 11.790 1.00 79.55 C
ATOM 10 O3' C A 127 96.638 145.508 13.148 1.00 76.28 O
ATOM 11 C2' C A 127 96.717 143.702 11.553 1.00 79.90 C
ATOM 12 O2' C A 127 97.884 143.288 12.236 1.00 81.30 O
ATOM 13 C1' C A 127 95.480 142.996 12.102 1.00 80.29 C
ATOM 14 N1 C A 127 95.264 141.672 11.493 1.00 80.43 N
ATOM 15 C2 C A 127 95.663 140.525 12.199 1.00 80.13 C
ATOM 16 O2 C A 127 96.161 140.651 13.332 1.00 79.18 O
ATOM 17 N3 C A 127 95.495 139.310 11.628 1.00 80.92 N
ATOM 18 C4 C A 127 94.947 139.213 10.411 1.00 81.75 C
ATOM 19 N4 C A 127 94.804 137.992 9.882 1.00 82.63 N
ATOM 20 C5 C A 127 94.523 140.361 9.681 1.00 81.20 C
ATOM 21 C6 C A 127 94.697 141.556 10.253 1.00 80.75 C
ATOM 22 P G A 128 96.867 147.048 13.549 1.00 73.90 P
ATOM 23 OP1 G A 128 97.790 147.666 12.555 1.00 73.90 O
ATOM 24 OP2 G A 128 97.198 147.109 14.996 1.00 73.20 O
ATOM 25 O5' G A 128 95.429 147.688 13.326 1.00 69.43 O
TER
ATOM 1 O3' U B 125 91.513 139.913 6.794 1.00 68.14 O
ATOM 2 P U B 126 92.984 140.276 6.224 1.00 72.30 P
ATOM 3 OP1 U B 126 92.871 140.164 4.753 1.00 71.62 O
ATOM 4 OP2 U B 126 94.003 139.460 6.938 1.00 71.50 O
ATOM 5 O5' U B 126 93.201 141.819 6.604 1.00 77.00 O
ATOM 6 C5' U B 126 94.009 142.706 5.767 1.00 83.12 C
ATOM 7 C4' U B 126 93.326 144.058 5.582 1.00 87.68 C
ATOM 8 O4' U B 126 91.974 143.832 5.111 1.00 91.12 O
ATOM 9 C3' U B 126 93.158 144.931 6.823 1.00 89.62 C
ATOM 10 O3' U B 126 94.267 145.820 6.976 1.00 88.05 O
ATOM 11 C2' U B 126 91.943 145.796 6.481 1.00 92.79 C
ATOM 12 O2' U B 126 92.256 146.985 5.780 1.00 94.83 O
ATOM 13 C1' U B 126 91.130 144.878 5.562 1.00 95.17 C
ATOM 14 N1 U B 126 89.893 144.295 6.113 1.00100.62 N
ATOM 15 C2 U B 126 89.204 143.372 5.323 1.00103.44 C
ATOM 16 O2 U B 126 89.566 143.052 4.191 1.00103.45 O
ATOM 17 N3 U B 126 88.071 142.845 5.906 1.00105.23 N
ATOM 18 C4 U B 126 87.555 143.144 7.159 1.00105.33 C
ATOM 19 O4 U B 126 86.534 142.569 7.550 1.00105.98 O
ATOM 20 C5 U B 126 88.308 144.115 7.899 1.00104.37 C
ATOM 21 C6 U B 126 89.421 144.641 7.369 1.00102.60 C
ATOM 22 P C B 127 95.584 145.358 7.768 1.00 88.42 P
ATOM 23 OP1 C B 127 96.343 146.599 8.074 1.00 87.59 O
ATOM 24 OP2 C B 127 96.239 144.274 6.987 1.00 87.96 O
ATOM 25 O5' C B 127 95.037 144.758 9.143 1.00 87.81 O
TER
Atoms:
C2: (95.663,140.525,12.199)
OP1: (96.343,146.599,8.074)
OP2: (96.239,144.274,6.987)
C4: (94.947,139.213,10.411)
O5': (95.037,144.758,9.143)
C3': (96.359,145.164,11.790)
C1': (95.480,142.996,12.102)
O4': (94.384,143.826,11.773)
C5': (94.424,145.607,10.139)
P: (95.584,145.358,7.768)
O2: (96.161,140.651,13.332)
C4': (94.853,145.182,11.528)
C2': (96.717,143.702,11.553)
O2': (97.884,143.288,12.236)
N1: (95.264,141.672,11.493)
N3: (95.495,139.310,11.628)
N4: (94.804,137.992,9.882)
C6: (94.697,141.556,10.253)
C5: (94.523,140.361,9.681)
O3': (96.638,145.508,13.148)
OP1: (96.343,146.599,8.074)
OP2: (96.239,144.274,6.987)
C4: (94.947,139.213,10.411)
O5': (95.037,144.758,9.143)
C3': (96.359,145.164,11.790)
C1': (95.480,142.996,12.102)
O4': (94.384,143.826,11.773)
C5': (94.424,145.607,10.139)
P: (95.584,145.358,7.768)
O2: (96.161,140.651,13.332)
C4': (94.853,145.182,11.528)
C2': (96.717,143.702,11.553)
O2': (97.884,143.288,12.236)
N1: (95.264,141.672,11.493)
N3: (95.495,139.310,11.628)
N4: (94.804,137.992,9.882)
C6: (94.697,141.556,10.253)
C5: (94.523,140.361,9.681)
O3': (96.638,145.508,13.148)
C4: (87.555,143.144,7.159)
N3: (88.071,142.845,5.906)
OP1: (92.871,140.164,4.753)
OP2: (94.003,139.460,6.938)
C2: (89.204,143.372,5.323)
C1': (91.130,144.878,5.562)
C3': (93.158,144.931,6.823)
O5': (93.201,141.819,6.604)
O4': (91.974,143.832,5.111)
C5': (94.009,142.706,5.767)
P: (92.984,140.276,6.224)
C4': (93.326,144.058,5.582)
C2': (91.943,145.796,6.481)
O2': (92.256,146.985,5.780)
N1: (89.893,144.295,6.113)
O4: (86.534,142.569,7.550)
O2: (89.566,143.052,4.191)
C6: (89.421,144.641,7.369)
C5: (88.308,144.115,7.899)
O3': (94.267,145.820,6.976)
N3: (88.071,142.845,5.906)
OP1: (92.871,140.164,4.753)
OP2: (94.003,139.460,6.938)
C2: (89.204,143.372,5.323)
C1': (91.130,144.878,5.562)
C3': (93.158,144.931,6.823)
O5': (93.201,141.819,6.604)
O4': (91.974,143.832,5.111)
C5': (94.009,142.706,5.767)
P: (92.984,140.276,6.224)
C4': (93.326,144.058,5.582)
C2': (91.943,145.796,6.481)
O2': (92.256,146.985,5.780)
N1: (89.893,144.295,6.113)
O4: (86.534,142.569,7.550)
O2: (89.566,143.052,4.191)
C6: (89.421,144.641,7.369)
C5: (88.308,144.115,7.899)
O3': (94.267,145.820,6.976)
Image (generated by PyMOL):