Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:01088:01087
Extra
PDB:
ATOM 1 O3' U A1087 44.880 105.046 117.147 1.00 40.67 O
ATOM 2 P C A1088 44.918 105.385 118.722 1.00 42.84 P
ATOM 3 OP1 C A1088 44.328 106.749 118.886 1.00 40.66 O
ATOM 4 OP2 C A1088 46.298 105.113 119.217 1.00 41.93 O
ATOM 5 O5' C A1088 43.947 104.296 119.375 1.00 41.95 O
ATOM 6 C5' C A1088 42.672 104.670 119.944 1.00 40.71 C
ATOM 7 C4' C A1088 42.008 103.469 120.585 1.00 41.45 C
ATOM 8 O4' C A1088 41.717 102.469 119.572 1.00 38.53 O
ATOM 9 C3' C A1088 42.835 102.720 121.620 1.00 42.40 C
ATOM 10 O3' C A1088 42.766 103.338 122.900 1.00 46.54 O
ATOM 11 C2' C A1088 42.173 101.349 121.623 1.00 41.35 C
ATOM 12 O2' C A1088 40.981 101.319 122.382 1.00 41.41 O
ATOM 13 C1' C A1088 41.836 101.172 120.137 1.00 38.58 C
ATOM 14 N1 C A1088 42.863 100.415 119.390 1.00 34.85 N
ATOM 15 C2 C A1088 43.010 99.043 119.649 1.00 34.39 C
ATOM 16 O2 C A1088 42.276 98.504 120.491 1.00 36.06 O
ATOM 17 N3 C A1088 43.952 98.340 118.981 1.00 33.03 N
ATOM 18 C4 C A1088 44.738 98.952 118.093 1.00 33.12 C
ATOM 19 N4 C A1088 45.671 98.221 117.480 1.00 29.73 N
ATOM 20 C5 C A1088 44.607 100.344 117.802 1.00 32.59 C
ATOM 21 C6 C A1088 43.665 101.029 118.466 1.00 33.38 C
ATOM 22 P U A1089 44.033 104.160 123.462 1.00 52.92 P
ATOM 23 OP1 U A1089 43.728 104.568 124.861 1.00 51.54 O
ATOM 24 OP2 U A1089 44.414 105.195 122.461 1.00 54.02 O
ATOM 25 O5' U A1089 45.207 103.092 123.504 1.00 52.32 O
TER
ATOM 1 O3' C B1086 49.532 100.832 114.936 1.00 35.49 O
ATOM 2 P U B1087 48.359 100.560 116.011 1.00 34.59 P
ATOM 3 OP1 U B1087 48.977 100.574 117.360 1.00 37.62 O
ATOM 4 OP2 U B1087 47.604 99.366 115.568 1.00 33.75 O
ATOM 5 O5' U B1087 47.405 101.828 115.913 1.00 33.94 O
ATOM 6 C5' U B1087 47.889 103.132 116.228 1.00 34.10 C
ATOM 7 C4' U B1087 46.804 104.152 116.015 1.00 37.49 C
ATOM 8 O4' U B1087 46.536 104.278 114.587 1.00 38.28 O
ATOM 9 C3' U B1087 45.458 103.835 116.673 1.00 37.86 C
ATOM 10 O3' U B1087 44.880 105.046 117.147 1.00 40.67 O
ATOM 11 C2' U B1087 44.637 103.303 115.501 1.00 38.07 C
ATOM 12 O2' U B1087 43.239 103.435 115.663 1.00 37.14 O
ATOM 13 C1' U B1087 45.142 104.208 114.381 1.00 37.25 C
ATOM 14 N1 U B1087 44.875 103.774 113.003 1.00 34.45 N
ATOM 15 C2 U B1087 44.290 104.702 112.146 1.00 34.29 C
ATOM 16 O2 U B1087 43.986 105.831 112.491 1.00 34.01 O
ATOM 17 N3 U B1087 44.070 104.256 110.869 1.00 32.95 N
ATOM 18 C4 U B1087 44.353 103.009 110.370 1.00 33.83 C
ATOM 19 O4 U B1087 44.073 102.755 109.200 1.00 32.83 O
ATOM 20 C5 U B1087 44.949 102.104 111.315 1.00 34.91 C
ATOM 21 C6 U B1087 45.185 102.510 112.566 1.00 34.07 C
ATOM 22 P C B1088 44.918 105.385 118.722 1.00 42.84 P
ATOM 23 OP1 C B1088 44.328 106.749 118.886 1.00 40.66 O
ATOM 24 OP2 C B1088 46.298 105.113 119.217 1.00 41.93 O
ATOM 25 O5' C B1088 43.947 104.296 119.375 1.00 41.95 O
TER
ATOM 2 P C A1088 44.918 105.385 118.722 1.00 42.84 P
ATOM 3 OP1 C A1088 44.328 106.749 118.886 1.00 40.66 O
ATOM 4 OP2 C A1088 46.298 105.113 119.217 1.00 41.93 O
ATOM 5 O5' C A1088 43.947 104.296 119.375 1.00 41.95 O
ATOM 6 C5' C A1088 42.672 104.670 119.944 1.00 40.71 C
ATOM 7 C4' C A1088 42.008 103.469 120.585 1.00 41.45 C
ATOM 8 O4' C A1088 41.717 102.469 119.572 1.00 38.53 O
ATOM 9 C3' C A1088 42.835 102.720 121.620 1.00 42.40 C
ATOM 10 O3' C A1088 42.766 103.338 122.900 1.00 46.54 O
ATOM 11 C2' C A1088 42.173 101.349 121.623 1.00 41.35 C
ATOM 12 O2' C A1088 40.981 101.319 122.382 1.00 41.41 O
ATOM 13 C1' C A1088 41.836 101.172 120.137 1.00 38.58 C
ATOM 14 N1 C A1088 42.863 100.415 119.390 1.00 34.85 N
ATOM 15 C2 C A1088 43.010 99.043 119.649 1.00 34.39 C
ATOM 16 O2 C A1088 42.276 98.504 120.491 1.00 36.06 O
ATOM 17 N3 C A1088 43.952 98.340 118.981 1.00 33.03 N
ATOM 18 C4 C A1088 44.738 98.952 118.093 1.00 33.12 C
ATOM 19 N4 C A1088 45.671 98.221 117.480 1.00 29.73 N
ATOM 20 C5 C A1088 44.607 100.344 117.802 1.00 32.59 C
ATOM 21 C6 C A1088 43.665 101.029 118.466 1.00 33.38 C
ATOM 22 P U A1089 44.033 104.160 123.462 1.00 52.92 P
ATOM 23 OP1 U A1089 43.728 104.568 124.861 1.00 51.54 O
ATOM 24 OP2 U A1089 44.414 105.195 122.461 1.00 54.02 O
ATOM 25 O5' U A1089 45.207 103.092 123.504 1.00 52.32 O
TER
ATOM 1 O3' C B1086 49.532 100.832 114.936 1.00 35.49 O
ATOM 2 P U B1087 48.359 100.560 116.011 1.00 34.59 P
ATOM 3 OP1 U B1087 48.977 100.574 117.360 1.00 37.62 O
ATOM 4 OP2 U B1087 47.604 99.366 115.568 1.00 33.75 O
ATOM 5 O5' U B1087 47.405 101.828 115.913 1.00 33.94 O
ATOM 6 C5' U B1087 47.889 103.132 116.228 1.00 34.10 C
ATOM 7 C4' U B1087 46.804 104.152 116.015 1.00 37.49 C
ATOM 8 O4' U B1087 46.536 104.278 114.587 1.00 38.28 O
ATOM 9 C3' U B1087 45.458 103.835 116.673 1.00 37.86 C
ATOM 10 O3' U B1087 44.880 105.046 117.147 1.00 40.67 O
ATOM 11 C2' U B1087 44.637 103.303 115.501 1.00 38.07 C
ATOM 12 O2' U B1087 43.239 103.435 115.663 1.00 37.14 O
ATOM 13 C1' U B1087 45.142 104.208 114.381 1.00 37.25 C
ATOM 14 N1 U B1087 44.875 103.774 113.003 1.00 34.45 N
ATOM 15 C2 U B1087 44.290 104.702 112.146 1.00 34.29 C
ATOM 16 O2 U B1087 43.986 105.831 112.491 1.00 34.01 O
ATOM 17 N3 U B1087 44.070 104.256 110.869 1.00 32.95 N
ATOM 18 C4 U B1087 44.353 103.009 110.370 1.00 33.83 C
ATOM 19 O4 U B1087 44.073 102.755 109.200 1.00 32.83 O
ATOM 20 C5 U B1087 44.949 102.104 111.315 1.00 34.91 C
ATOM 21 C6 U B1087 45.185 102.510 112.566 1.00 34.07 C
ATOM 22 P C B1088 44.918 105.385 118.722 1.00 42.84 P
ATOM 23 OP1 C B1088 44.328 106.749 118.886 1.00 40.66 O
ATOM 24 OP2 C B1088 46.298 105.113 119.217 1.00 41.93 O
ATOM 25 O5' C B1088 43.947 104.296 119.375 1.00 41.95 O
TER
Atoms:
C2: (43.010,99.043,119.649)
OP1: (44.328,106.749,118.886)
OP2: (46.298,105.113,119.217)
C4: (44.738,98.952,118.093)
O5': (43.947,104.296,119.375)
C3': (42.835,102.720,121.620)
C1': (41.836,101.172,120.137)
O4': (41.717,102.469,119.572)
C5': (42.672,104.670,119.944)
P: (44.918,105.385,118.722)
O2: (42.276,98.504,120.491)
C4': (42.008,103.469,120.585)
C2': (42.173,101.349,121.623)
O2': (40.981,101.319,122.382)
N1: (42.863,100.415,119.390)
N3: (43.952,98.340,118.981)
N4: (45.671,98.221,117.480)
C6: (43.665,101.029,118.466)
C5: (44.607,100.344,117.802)
O3': (42.766,103.338,122.900)
OP1: (44.328,106.749,118.886)
OP2: (46.298,105.113,119.217)
C4: (44.738,98.952,118.093)
O5': (43.947,104.296,119.375)
C3': (42.835,102.720,121.620)
C1': (41.836,101.172,120.137)
O4': (41.717,102.469,119.572)
C5': (42.672,104.670,119.944)
P: (44.918,105.385,118.722)
O2: (42.276,98.504,120.491)
C4': (42.008,103.469,120.585)
C2': (42.173,101.349,121.623)
O2': (40.981,101.319,122.382)
N1: (42.863,100.415,119.390)
N3: (43.952,98.340,118.981)
N4: (45.671,98.221,117.480)
C6: (43.665,101.029,118.466)
C5: (44.607,100.344,117.802)
O3': (42.766,103.338,122.900)
C4: (44.353,103.009,110.370)
N3: (44.070,104.256,110.869)
OP1: (48.977,100.574,117.360)
OP2: (47.604,99.366,115.568)
C2: (44.290,104.702,112.146)
C1': (45.142,104.208,114.381)
C3': (45.458,103.835,116.673)
O5': (47.405,101.828,115.913)
O4': (46.536,104.278,114.587)
C5': (47.889,103.132,116.228)
P: (48.359,100.560,116.011)
C4': (46.804,104.152,116.015)
C2': (44.637,103.303,115.501)
O2': (43.239,103.435,115.663)
N1: (44.875,103.774,113.003)
O4: (44.073,102.755,109.200)
O2: (43.986,105.831,112.491)
C6: (45.185,102.510,112.566)
C5: (44.949,102.104,111.315)
O3': (44.880,105.046,117.147)
N3: (44.070,104.256,110.869)
OP1: (48.977,100.574,117.360)
OP2: (47.604,99.366,115.568)
C2: (44.290,104.702,112.146)
C1': (45.142,104.208,114.381)
C3': (45.458,103.835,116.673)
O5': (47.405,101.828,115.913)
O4': (46.536,104.278,114.587)
C5': (47.889,103.132,116.228)
P: (48.359,100.560,116.011)
C4': (46.804,104.152,116.015)
C2': (44.637,103.303,115.501)
O2': (43.239,103.435,115.663)
N1: (44.875,103.774,113.003)
O4: (44.073,102.755,109.200)
O2: (43.986,105.831,112.491)
C6: (45.185,102.510,112.566)
C5: (44.949,102.104,111.315)
O3': (44.880,105.046,117.147)
Image (generated by PyMOL):