Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E58:E57
Extra
PDB:
ATOM 1 O3' U A 57 -15.820 37.068 15.527 1.00 37.37 O
ATOM 2 P C A 58 -15.151 37.380 16.951 1.00 40.55 P
ATOM 3 OP1 C A 58 -15.517 38.762 17.356 1.00 40.15 O
ATOM 4 OP2 C A 58 -13.721 36.996 16.859 1.00 40.19 O
ATOM 5 O5' C A 58 -15.870 36.352 17.933 1.00 41.03 O
ATOM 6 C5' C A 58 -16.616 36.809 19.056 1.00 41.89 C
ATOM 7 C4' C A 58 -16.539 35.797 20.172 1.00 42.90 C
ATOM 8 O4' C A 58 -17.207 34.573 19.764 1.00 43.32 O
ATOM 9 C3' C A 58 -15.133 35.349 20.531 1.00 43.04 C
ATOM 10 O3' C A 58 -14.518 36.262 21.430 1.00 43.76 O
ATOM 11 C2' C A 58 -15.381 33.991 21.173 1.00 43.48 C
ATOM 12 O2' C A 58 -15.802 34.088 22.520 1.00 45.06 O
ATOM 13 C1' C A 58 -16.525 33.455 20.309 1.00 42.14 C
ATOM 14 N1 C A 58 -16.061 32.608 19.199 1.00 39.30 N
ATOM 15 C2 C A 58 -15.627 31.314 19.484 1.00 38.93 C
ATOM 16 O2 C A 58 -15.647 30.923 20.660 1.00 37.41 O
ATOM 17 N3 C A 58 -15.198 30.522 18.474 1.00 40.22 N
ATOM 18 C4 C A 58 -15.192 30.981 17.222 1.00 40.62 C
ATOM 19 N4 C A 58 -14.757 30.162 16.258 1.00 37.78 N
ATOM 20 C5 C A 58 -15.630 32.300 16.902 1.00 40.04 C
ATOM 21 C6 C A 58 -16.051 33.073 17.912 1.00 39.07 C
ATOM 22 P C A 59 -12.916 36.361 21.486 1.00 44.26 P
ATOM 23 OP1 C A 59 -12.541 37.485 22.384 1.00 44.29 O
ATOM 24 OP2 C A 59 -12.422 36.344 20.087 1.00 45.08 O
ATOM 25 O5' C A 59 -12.478 34.996 22.177 1.00 43.26 O
TER
ATOM 1 O3' G B 56 -14.546 32.016 11.559 1.00 31.12 O
ATOM 2 P U B 57 -15.043 31.813 13.076 1.00 33.10 P
ATOM 3 OP1 U B 57 -13.880 31.417 13.910 1.00 31.87 O
ATOM 4 OP2 U B 57 -16.249 30.951 13.043 1.00 33.23 O
ATOM 5 O5' U B 57 -15.513 33.266 13.526 1.00 33.20 O
ATOM 6 C5' U B 57 -14.722 34.411 13.234 1.00 33.98 C
ATOM 7 C4' U B 57 -15.466 35.664 13.617 1.00 35.29 C
ATOM 8 O4' U B 57 -16.672 35.767 12.817 1.00 35.95 O
ATOM 9 C3' U B 57 -15.901 35.725 15.077 1.00 36.92 C
ATOM 10 O3' U B 57 -15.820 37.068 15.527 1.00 37.37 O
ATOM 11 C2' U B 57 -17.363 35.298 15.019 1.00 37.85 C
ATOM 12 O2' U B 57 -18.144 35.812 16.080 1.00 36.71 O
ATOM 13 C1' U B 57 -17.797 35.851 13.662 1.00 38.24 C
ATOM 14 N1 U B 57 -18.889 35.082 13.050 1.00 40.79 N
ATOM 15 C2 U B 57 -20.135 35.674 12.981 1.00 43.35 C
ATOM 16 O2 U B 57 -20.358 36.801 13.391 1.00 44.85 O
ATOM 17 N3 U B 57 -21.113 34.896 12.412 1.00 44.66 N
ATOM 18 C4 U B 57 -20.971 33.616 11.913 1.00 43.94 C
ATOM 19 O4 U B 57 -21.944 33.049 11.417 1.00 45.09 O
ATOM 20 C5 U B 57 -19.650 33.078 12.020 1.00 43.28 C
ATOM 21 C6 U B 57 -18.679 33.812 12.569 1.00 41.76 C
ATOM 22 P C B 58 -15.151 37.380 16.951 1.00 40.55 P
ATOM 23 OP1 C B 58 -15.517 38.762 17.356 1.00 40.15 O
ATOM 24 OP2 C B 58 -13.721 36.996 16.859 1.00 40.19 O
ATOM 25 O5' C B 58 -15.870 36.352 17.933 1.00 41.03 O
TER
ATOM 2 P C A 58 -15.151 37.380 16.951 1.00 40.55 P
ATOM 3 OP1 C A 58 -15.517 38.762 17.356 1.00 40.15 O
ATOM 4 OP2 C A 58 -13.721 36.996 16.859 1.00 40.19 O
ATOM 5 O5' C A 58 -15.870 36.352 17.933 1.00 41.03 O
ATOM 6 C5' C A 58 -16.616 36.809 19.056 1.00 41.89 C
ATOM 7 C4' C A 58 -16.539 35.797 20.172 1.00 42.90 C
ATOM 8 O4' C A 58 -17.207 34.573 19.764 1.00 43.32 O
ATOM 9 C3' C A 58 -15.133 35.349 20.531 1.00 43.04 C
ATOM 10 O3' C A 58 -14.518 36.262 21.430 1.00 43.76 O
ATOM 11 C2' C A 58 -15.381 33.991 21.173 1.00 43.48 C
ATOM 12 O2' C A 58 -15.802 34.088 22.520 1.00 45.06 O
ATOM 13 C1' C A 58 -16.525 33.455 20.309 1.00 42.14 C
ATOM 14 N1 C A 58 -16.061 32.608 19.199 1.00 39.30 N
ATOM 15 C2 C A 58 -15.627 31.314 19.484 1.00 38.93 C
ATOM 16 O2 C A 58 -15.647 30.923 20.660 1.00 37.41 O
ATOM 17 N3 C A 58 -15.198 30.522 18.474 1.00 40.22 N
ATOM 18 C4 C A 58 -15.192 30.981 17.222 1.00 40.62 C
ATOM 19 N4 C A 58 -14.757 30.162 16.258 1.00 37.78 N
ATOM 20 C5 C A 58 -15.630 32.300 16.902 1.00 40.04 C
ATOM 21 C6 C A 58 -16.051 33.073 17.912 1.00 39.07 C
ATOM 22 P C A 59 -12.916 36.361 21.486 1.00 44.26 P
ATOM 23 OP1 C A 59 -12.541 37.485 22.384 1.00 44.29 O
ATOM 24 OP2 C A 59 -12.422 36.344 20.087 1.00 45.08 O
ATOM 25 O5' C A 59 -12.478 34.996 22.177 1.00 43.26 O
TER
ATOM 1 O3' G B 56 -14.546 32.016 11.559 1.00 31.12 O
ATOM 2 P U B 57 -15.043 31.813 13.076 1.00 33.10 P
ATOM 3 OP1 U B 57 -13.880 31.417 13.910 1.00 31.87 O
ATOM 4 OP2 U B 57 -16.249 30.951 13.043 1.00 33.23 O
ATOM 5 O5' U B 57 -15.513 33.266 13.526 1.00 33.20 O
ATOM 6 C5' U B 57 -14.722 34.411 13.234 1.00 33.98 C
ATOM 7 C4' U B 57 -15.466 35.664 13.617 1.00 35.29 C
ATOM 8 O4' U B 57 -16.672 35.767 12.817 1.00 35.95 O
ATOM 9 C3' U B 57 -15.901 35.725 15.077 1.00 36.92 C
ATOM 10 O3' U B 57 -15.820 37.068 15.527 1.00 37.37 O
ATOM 11 C2' U B 57 -17.363 35.298 15.019 1.00 37.85 C
ATOM 12 O2' U B 57 -18.144 35.812 16.080 1.00 36.71 O
ATOM 13 C1' U B 57 -17.797 35.851 13.662 1.00 38.24 C
ATOM 14 N1 U B 57 -18.889 35.082 13.050 1.00 40.79 N
ATOM 15 C2 U B 57 -20.135 35.674 12.981 1.00 43.35 C
ATOM 16 O2 U B 57 -20.358 36.801 13.391 1.00 44.85 O
ATOM 17 N3 U B 57 -21.113 34.896 12.412 1.00 44.66 N
ATOM 18 C4 U B 57 -20.971 33.616 11.913 1.00 43.94 C
ATOM 19 O4 U B 57 -21.944 33.049 11.417 1.00 45.09 O
ATOM 20 C5 U B 57 -19.650 33.078 12.020 1.00 43.28 C
ATOM 21 C6 U B 57 -18.679 33.812 12.569 1.00 41.76 C
ATOM 22 P C B 58 -15.151 37.380 16.951 1.00 40.55 P
ATOM 23 OP1 C B 58 -15.517 38.762 17.356 1.00 40.15 O
ATOM 24 OP2 C B 58 -13.721 36.996 16.859 1.00 40.19 O
ATOM 25 O5' C B 58 -15.870 36.352 17.933 1.00 41.03 O
TER
Atoms:
C2: (-15.627,31.314,19.484)
OP1: (-15.517,38.762,17.356)
OP2: (-13.721,36.996,16.859)
C4: (-15.192,30.981,17.222)
O5': (-15.870,36.352,17.933)
C3': (-15.133,35.349,20.531)
C1': (-16.525,33.455,20.309)
O4': (-17.207,34.573,19.764)
C5': (-16.616,36.809,19.056)
P: (-15.151,37.380,16.951)
O2: (-15.647,30.923,20.660)
C4': (-16.539,35.797,20.172)
C2': (-15.381,33.991,21.173)
O2': (-15.802,34.088,22.520)
N1: (-16.061,32.608,19.199)
N3: (-15.198,30.522,18.474)
N4: (-14.757,30.162,16.258)
C6: (-16.051,33.073,17.912)
C5: (-15.630,32.300,16.902)
O3': (-14.518,36.262,21.430)
OP1: (-15.517,38.762,17.356)
OP2: (-13.721,36.996,16.859)
C4: (-15.192,30.981,17.222)
O5': (-15.870,36.352,17.933)
C3': (-15.133,35.349,20.531)
C1': (-16.525,33.455,20.309)
O4': (-17.207,34.573,19.764)
C5': (-16.616,36.809,19.056)
P: (-15.151,37.380,16.951)
O2: (-15.647,30.923,20.660)
C4': (-16.539,35.797,20.172)
C2': (-15.381,33.991,21.173)
O2': (-15.802,34.088,22.520)
N1: (-16.061,32.608,19.199)
N3: (-15.198,30.522,18.474)
N4: (-14.757,30.162,16.258)
C6: (-16.051,33.073,17.912)
C5: (-15.630,32.300,16.902)
O3': (-14.518,36.262,21.430)
C4: (-20.971,33.616,11.913)
N3: (-21.113,34.896,12.412)
OP1: (-13.880,31.417,13.910)
OP2: (-16.249,30.951,13.043)
C2: (-20.135,35.674,12.981)
C1': (-17.797,35.851,13.662)
C3': (-15.901,35.725,15.077)
O5': (-15.513,33.266,13.526)
O4': (-16.672,35.767,12.817)
C5': (-14.722,34.411,13.234)
P: (-15.043,31.813,13.076)
C4': (-15.466,35.664,13.617)
C2': (-17.363,35.298,15.019)
O2': (-18.144,35.812,16.080)
N1: (-18.889,35.082,13.050)
O4: (-21.944,33.049,11.417)
O2: (-20.358,36.801,13.391)
C6: (-18.679,33.812,12.569)
C5: (-19.650,33.078,12.020)
O3': (-15.820,37.068,15.527)
N3: (-21.113,34.896,12.412)
OP1: (-13.880,31.417,13.910)
OP2: (-16.249,30.951,13.043)
C2: (-20.135,35.674,12.981)
C1': (-17.797,35.851,13.662)
C3': (-15.901,35.725,15.077)
O5': (-15.513,33.266,13.526)
O4': (-16.672,35.767,12.817)
C5': (-14.722,34.411,13.234)
P: (-15.043,31.813,13.076)
C4': (-15.466,35.664,13.617)
C2': (-17.363,35.298,15.019)
O2': (-18.144,35.812,16.080)
N1: (-18.889,35.082,13.050)
O4: (-21.944,33.049,11.417)
O2: (-20.358,36.801,13.391)
C6: (-18.679,33.812,12.569)
C5: (-19.650,33.078,12.020)
O3': (-15.820,37.068,15.527)
Image (generated by PyMOL):