Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1335:A1334
Extra
PDB:
ATOM 1 O3' U A1334 228.920 127.499 21.692 1.00 91.50 O
ATOM 2 P C A1335 229.204 127.829 23.230 1.00 90.76 P
ATOM 3 OP1 C A1335 228.401 126.850 24.021 1.00 90.77 O
ATOM 4 OP2 C A1335 228.973 129.294 23.389 1.00 90.64 O
ATOM 5 O5' C A1335 230.760 127.501 23.408 1.00 88.55 O
ATOM 6 C5' C A1335 231.282 126.183 23.118 1.00 87.10 C
ATOM 7 C4' C A1335 232.736 126.266 22.695 1.00 85.58 C
ATOM 8 O4' C A1335 232.842 127.039 21.474 1.00 84.39 O
ATOM 9 C3' C A1335 233.683 126.959 23.658 1.00 85.82 C
ATOM 10 O3' C A1335 234.144 126.067 24.662 1.00 88.60 O
ATOM 11 C2' C A1335 234.810 127.438 22.749 1.00 83.02 C
ATOM 12 O2' C A1335 235.725 126.407 22.455 1.00 83.03 O
ATOM 13 C1' C A1335 234.060 127.757 21.464 1.00 80.62 C
ATOM 14 N1 C A1335 233.778 129.183 21.220 1.00 77.29 N
ATOM 15 C2 C A1335 234.795 129.977 20.694 1.00 76.77 C
ATOM 16 O2 C A1335 235.926 129.482 20.552 1.00 79.67 O
ATOM 17 N3 C A1335 234.531 131.265 20.362 1.00 73.63 N
ATOM 18 C4 C A1335 233.312 131.769 20.563 1.00 72.45 C
ATOM 19 N4 C A1335 233.083 133.035 20.176 1.00 70.38 N
ATOM 20 C5 C A1335 232.269 130.997 21.155 1.00 72.47 C
ATOM 21 C6 C A1335 232.543 129.721 21.464 1.00 75.26 C
ATOM 22 P A A1336 234.755 126.664 26.031 1.00 90.69 P
ATOM 23 OP1 A A1336 233.815 127.739 26.491 1.00 88.45 O
ATOM 24 OP2 A A1336 235.073 125.497 26.915 1.00 89.25 O
ATOM 25 O5' A A1336 236.113 127.380 25.556 1.00 89.64 O
TER
ATOM 1 O3' A B1333 228.109 133.047 19.415 1.00 97.41 O
ATOM 2 P U B1334 228.845 132.747 20.807 1.00 96.18 P
ATOM 3 OP1 U B1334 227.894 133.166 21.874 1.00 96.92 O
ATOM 4 OP2 U B1334 230.201 133.337 20.735 1.00 96.65 O
ATOM 5 O5' U B1334 228.981 131.170 20.863 1.00 95.18 O
ATOM 6 C5' U B1334 227.858 130.318 20.603 1.00 93.78 C
ATOM 7 C4' U B1334 228.322 129.033 19.968 1.00 92.81 C
ATOM 8 O4' U B1334 228.874 129.304 18.664 1.00 92.85 O
ATOM 9 C3' U B1334 229.453 128.334 20.699 1.00 92.37 C
ATOM 10 O3' U B1334 228.920 127.499 21.692 1.00 91.50 O
ATOM 11 C2' U B1334 230.139 127.509 19.618 1.00 92.35 C
ATOM 12 O2' U B1334 229.614 126.204 19.545 1.00 92.76 O
ATOM 13 C1' U B1334 229.802 128.287 18.343 1.00 93.39 C
ATOM 14 N1 U B1334 230.934 128.861 17.597 1.00 94.57 N
ATOM 15 C2 U B1334 231.643 128.009 16.766 1.00 95.75 C
ATOM 16 O2 U B1334 231.375 126.824 16.642 1.00 96.20 O
ATOM 17 N3 U B1334 232.677 128.592 16.081 1.00 96.33 N
ATOM 18 C4 U B1334 233.065 129.905 16.136 1.00 96.66 C
ATOM 19 O4 U B1334 234.008 130.285 15.440 1.00 98.47 O
ATOM 20 C5 U B1334 232.288 130.720 17.014 1.00 95.70 C
ATOM 21 C6 U B1334 231.277 130.184 17.699 1.00 95.00 C
ATOM 22 P C B1335 229.204 127.829 23.230 1.00 90.76 P
ATOM 23 OP1 C B1335 228.401 126.850 24.021 1.00 90.77 O
ATOM 24 OP2 C B1335 228.973 129.294 23.389 1.00 90.64 O
ATOM 25 O5' C B1335 230.760 127.501 23.408 1.00 88.55 O
TER
ATOM 2 P C A1335 229.204 127.829 23.230 1.00 90.76 P
ATOM 3 OP1 C A1335 228.401 126.850 24.021 1.00 90.77 O
ATOM 4 OP2 C A1335 228.973 129.294 23.389 1.00 90.64 O
ATOM 5 O5' C A1335 230.760 127.501 23.408 1.00 88.55 O
ATOM 6 C5' C A1335 231.282 126.183 23.118 1.00 87.10 C
ATOM 7 C4' C A1335 232.736 126.266 22.695 1.00 85.58 C
ATOM 8 O4' C A1335 232.842 127.039 21.474 1.00 84.39 O
ATOM 9 C3' C A1335 233.683 126.959 23.658 1.00 85.82 C
ATOM 10 O3' C A1335 234.144 126.067 24.662 1.00 88.60 O
ATOM 11 C2' C A1335 234.810 127.438 22.749 1.00 83.02 C
ATOM 12 O2' C A1335 235.725 126.407 22.455 1.00 83.03 O
ATOM 13 C1' C A1335 234.060 127.757 21.464 1.00 80.62 C
ATOM 14 N1 C A1335 233.778 129.183 21.220 1.00 77.29 N
ATOM 15 C2 C A1335 234.795 129.977 20.694 1.00 76.77 C
ATOM 16 O2 C A1335 235.926 129.482 20.552 1.00 79.67 O
ATOM 17 N3 C A1335 234.531 131.265 20.362 1.00 73.63 N
ATOM 18 C4 C A1335 233.312 131.769 20.563 1.00 72.45 C
ATOM 19 N4 C A1335 233.083 133.035 20.176 1.00 70.38 N
ATOM 20 C5 C A1335 232.269 130.997 21.155 1.00 72.47 C
ATOM 21 C6 C A1335 232.543 129.721 21.464 1.00 75.26 C
ATOM 22 P A A1336 234.755 126.664 26.031 1.00 90.69 P
ATOM 23 OP1 A A1336 233.815 127.739 26.491 1.00 88.45 O
ATOM 24 OP2 A A1336 235.073 125.497 26.915 1.00 89.25 O
ATOM 25 O5' A A1336 236.113 127.380 25.556 1.00 89.64 O
TER
ATOM 1 O3' A B1333 228.109 133.047 19.415 1.00 97.41 O
ATOM 2 P U B1334 228.845 132.747 20.807 1.00 96.18 P
ATOM 3 OP1 U B1334 227.894 133.166 21.874 1.00 96.92 O
ATOM 4 OP2 U B1334 230.201 133.337 20.735 1.00 96.65 O
ATOM 5 O5' U B1334 228.981 131.170 20.863 1.00 95.18 O
ATOM 6 C5' U B1334 227.858 130.318 20.603 1.00 93.78 C
ATOM 7 C4' U B1334 228.322 129.033 19.968 1.00 92.81 C
ATOM 8 O4' U B1334 228.874 129.304 18.664 1.00 92.85 O
ATOM 9 C3' U B1334 229.453 128.334 20.699 1.00 92.37 C
ATOM 10 O3' U B1334 228.920 127.499 21.692 1.00 91.50 O
ATOM 11 C2' U B1334 230.139 127.509 19.618 1.00 92.35 C
ATOM 12 O2' U B1334 229.614 126.204 19.545 1.00 92.76 O
ATOM 13 C1' U B1334 229.802 128.287 18.343 1.00 93.39 C
ATOM 14 N1 U B1334 230.934 128.861 17.597 1.00 94.57 N
ATOM 15 C2 U B1334 231.643 128.009 16.766 1.00 95.75 C
ATOM 16 O2 U B1334 231.375 126.824 16.642 1.00 96.20 O
ATOM 17 N3 U B1334 232.677 128.592 16.081 1.00 96.33 N
ATOM 18 C4 U B1334 233.065 129.905 16.136 1.00 96.66 C
ATOM 19 O4 U B1334 234.008 130.285 15.440 1.00 98.47 O
ATOM 20 C5 U B1334 232.288 130.720 17.014 1.00 95.70 C
ATOM 21 C6 U B1334 231.277 130.184 17.699 1.00 95.00 C
ATOM 22 P C B1335 229.204 127.829 23.230 1.00 90.76 P
ATOM 23 OP1 C B1335 228.401 126.850 24.021 1.00 90.77 O
ATOM 24 OP2 C B1335 228.973 129.294 23.389 1.00 90.64 O
ATOM 25 O5' C B1335 230.760 127.501 23.408 1.00 88.55 O
TER
Atoms:
C2: (234.795,129.977,20.694)
OP1: (228.401,126.850,24.021)
OP2: (228.973,129.294,23.389)
C4: (233.312,131.769,20.563)
O5': (230.760,127.501,23.408)
C3': (233.683,126.959,23.658)
C1': (234.060,127.757,21.464)
O4': (232.842,127.039,21.474)
C5': (231.282,126.183,23.118)
P: (229.204,127.829,23.230)
O2: (235.926,129.482,20.552)
C4': (232.736,126.266,22.695)
C2': (234.810,127.438,22.749)
O2': (235.725,126.407,22.455)
N1: (233.778,129.183,21.220)
N3: (234.531,131.265,20.362)
N4: (233.083,133.035,20.176)
C6: (232.543,129.721,21.464)
C5: (232.269,130.997,21.155)
O3': (234.144,126.067,24.662)
OP1: (228.401,126.850,24.021)
OP2: (228.973,129.294,23.389)
C4: (233.312,131.769,20.563)
O5': (230.760,127.501,23.408)
C3': (233.683,126.959,23.658)
C1': (234.060,127.757,21.464)
O4': (232.842,127.039,21.474)
C5': (231.282,126.183,23.118)
P: (229.204,127.829,23.230)
O2: (235.926,129.482,20.552)
C4': (232.736,126.266,22.695)
C2': (234.810,127.438,22.749)
O2': (235.725,126.407,22.455)
N1: (233.778,129.183,21.220)
N3: (234.531,131.265,20.362)
N4: (233.083,133.035,20.176)
C6: (232.543,129.721,21.464)
C5: (232.269,130.997,21.155)
O3': (234.144,126.067,24.662)
C4: (233.065,129.905,16.136)
N3: (232.677,128.592,16.081)
OP1: (227.894,133.166,21.874)
OP2: (230.201,133.337,20.735)
C2: (231.643,128.009,16.766)
C1': (229.802,128.287,18.343)
C3': (229.453,128.334,20.699)
O5': (228.981,131.170,20.863)
O4': (228.874,129.304,18.664)
C5': (227.858,130.318,20.603)
P: (228.845,132.747,20.807)
C4': (228.322,129.033,19.968)
C2': (230.139,127.509,19.618)
O2': (229.614,126.204,19.545)
N1: (230.934,128.861,17.597)
O4: (234.008,130.285,15.440)
O2: (231.375,126.824,16.642)
C6: (231.277,130.184,17.699)
C5: (232.288,130.720,17.014)
O3': (228.920,127.499,21.692)
N3: (232.677,128.592,16.081)
OP1: (227.894,133.166,21.874)
OP2: (230.201,133.337,20.735)
C2: (231.643,128.009,16.766)
C1': (229.802,128.287,18.343)
C3': (229.453,128.334,20.699)
O5': (228.981,131.170,20.863)
O4': (228.874,129.304,18.664)
C5': (227.858,130.318,20.603)
P: (228.845,132.747,20.807)
C4': (228.322,129.033,19.968)
C2': (230.139,127.509,19.618)
O2': (229.614,126.204,19.545)
N1: (230.934,128.861,17.597)
O4: (234.008,130.285,15.440)
O2: (231.375,126.824,16.642)
C6: (231.277,130.184,17.699)
C5: (232.288,130.720,17.014)
O3': (228.920,127.499,21.692)
Image (generated by PyMOL):