Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1238:A1237
Extra
PDB:
ATOM 1 O3' U A1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 2 P C A1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 3 OP1 C A1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 4 OP2 C A1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 5 O5' C A1238 27.587 -74.721 -2.693 1.00 38.27 O
ATOM 6 C5' C A1238 27.484 -74.628 -4.099 1.00 28.02 C
ATOM 7 C4' C A1238 26.238 -75.312 -4.600 1.00 33.29 C
ATOM 8 O4' C A1238 26.363 -76.738 -4.431 1.00 42.83 O
ATOM 9 C3' C A1238 24.952 -74.962 -3.880 1.00 29.21 C
ATOM 10 O3' C A1238 24.365 -73.788 -4.380 1.00 31.63 O
ATOM 11 C2' C A1238 24.089 -76.183 -4.103 1.00 31.52 C
ATOM 12 O2' C A1238 23.494 -76.133 -5.382 1.00 32.90 O
ATOM 13 C1' C A1238 25.120 -77.299 -4.099 1.00 32.95 C
ATOM 14 N1 C A1238 25.240 -77.940 -2.789 1.00 39.83 N
ATOM 15 C2 C A1238 24.125 -78.604 -2.278 1.00 41.75 C
ATOM 16 O2 C A1238 23.089 -78.583 -2.961 1.00 42.43 O
ATOM 17 N3 C A1238 24.212 -79.223 -1.075 1.00 38.22 N
ATOM 18 C4 C A1238 25.372 -79.188 -0.423 1.00 39.72 C
ATOM 19 N4 C A1238 25.438 -79.790 0.757 1.00 47.66 N
ATOM 20 C5 C A1238 26.526 -78.527 -0.932 1.00 39.55 C
ATOM 21 C6 C A1238 26.421 -77.918 -2.114 1.00 35.94 C
ATOM 22 P C A1239 23.702 -72.740 -3.376 1.00 37.21 P
ATOM 23 OP1 C A1239 23.599 -71.449 -4.094 1.00 26.13 O
ATOM 24 OP2 C A1239 24.470 -72.790 -2.107 1.00 33.69 O
ATOM 25 O5' C A1239 22.257 -73.359 -3.153 1.00 49.59 O
TER
ATOM 1 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 2 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U B1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U B1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U B1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U B1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U B1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U B1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U B1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U B1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U B1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U B1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U B1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U B1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U B1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U B1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U B1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
ATOM 2 P C A1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 3 OP1 C A1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 4 OP2 C A1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 5 O5' C A1238 27.587 -74.721 -2.693 1.00 38.27 O
ATOM 6 C5' C A1238 27.484 -74.628 -4.099 1.00 28.02 C
ATOM 7 C4' C A1238 26.238 -75.312 -4.600 1.00 33.29 C
ATOM 8 O4' C A1238 26.363 -76.738 -4.431 1.00 42.83 O
ATOM 9 C3' C A1238 24.952 -74.962 -3.880 1.00 29.21 C
ATOM 10 O3' C A1238 24.365 -73.788 -4.380 1.00 31.63 O
ATOM 11 C2' C A1238 24.089 -76.183 -4.103 1.00 31.52 C
ATOM 12 O2' C A1238 23.494 -76.133 -5.382 1.00 32.90 O
ATOM 13 C1' C A1238 25.120 -77.299 -4.099 1.00 32.95 C
ATOM 14 N1 C A1238 25.240 -77.940 -2.789 1.00 39.83 N
ATOM 15 C2 C A1238 24.125 -78.604 -2.278 1.00 41.75 C
ATOM 16 O2 C A1238 23.089 -78.583 -2.961 1.00 42.43 O
ATOM 17 N3 C A1238 24.212 -79.223 -1.075 1.00 38.22 N
ATOM 18 C4 C A1238 25.372 -79.188 -0.423 1.00 39.72 C
ATOM 19 N4 C A1238 25.438 -79.790 0.757 1.00 47.66 N
ATOM 20 C5 C A1238 26.526 -78.527 -0.932 1.00 39.55 C
ATOM 21 C6 C A1238 26.421 -77.918 -2.114 1.00 35.94 C
ATOM 22 P C A1239 23.702 -72.740 -3.376 1.00 37.21 P
ATOM 23 OP1 C A1239 23.599 -71.449 -4.094 1.00 26.13 O
ATOM 24 OP2 C A1239 24.470 -72.790 -2.107 1.00 33.69 O
ATOM 25 O5' C A1239 22.257 -73.359 -3.153 1.00 49.59 O
TER
ATOM 1 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 2 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U B1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U B1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U B1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U B1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U B1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U B1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U B1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U B1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U B1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U B1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U B1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U B1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U B1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U B1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U B1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
Atoms:
C2: (24.125,-78.604,-2.278)
OP1: (29.067,-72.670,-2.630)
OP2: (28.242,-73.739,-0.465)
C4: (25.372,-79.188,-0.423)
O5': (27.587,-74.721,-2.693)
C3': (24.952,-74.962,-3.880)
C1': (25.120,-77.299,-4.099)
O4': (26.363,-76.738,-4.431)
C5': (27.484,-74.628,-4.099)
P: (28.677,-73.885,-1.875)
O2: (23.089,-78.583,-2.961)
C4': (26.238,-75.312,-4.600)
C2': (24.089,-76.183,-4.103)
O2': (23.494,-76.133,-5.382)
N1: (25.240,-77.940,-2.789)
N3: (24.212,-79.223,-1.075)
N4: (25.438,-79.790,0.757)
C6: (26.421,-77.918,-2.114)
C5: (26.526,-78.527,-0.932)
O3': (24.365,-73.788,-4.380)
OP1: (29.067,-72.670,-2.630)
OP2: (28.242,-73.739,-0.465)
C4: (25.372,-79.188,-0.423)
O5': (27.587,-74.721,-2.693)
C3': (24.952,-74.962,-3.880)
C1': (25.120,-77.299,-4.099)
O4': (26.363,-76.738,-4.431)
C5': (27.484,-74.628,-4.099)
P: (28.677,-73.885,-1.875)
O2: (23.089,-78.583,-2.961)
C4': (26.238,-75.312,-4.600)
C2': (24.089,-76.183,-4.103)
O2': (23.494,-76.133,-5.382)
N1: (25.240,-77.940,-2.789)
N3: (24.212,-79.223,-1.075)
N4: (25.438,-79.790,0.757)
C6: (26.421,-77.918,-2.114)
C5: (26.526,-78.527,-0.932)
O3': (24.365,-73.788,-4.380)
C4: (35.066,-79.188,0.467)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
Image (generated by PyMOL):