Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1347:A1346
Extra
PDB:
ATOM 1 O3' U A1346 6.479 -50.107 -27.977 1.00 37.97 O
ATOM 2 P C A1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 3 OP1 C A1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 4 OP2 C A1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 5 O5' C A1347 5.597 -52.491 -28.190 1.00 30.87 O
ATOM 6 C5' C A1347 5.345 -53.742 -28.832 1.00 33.72 C
ATOM 7 C4' C A1347 4.735 -54.756 -27.906 1.00 37.38 C
ATOM 8 O4' C A1347 5.628 -55.032 -26.804 1.00 45.35 O
ATOM 9 C3' C A1347 3.452 -54.346 -27.235 1.00 48.56 C
ATOM 10 O3' C A1347 2.326 -54.478 -28.082 1.00 52.84 O
ATOM 11 C2' C A1347 3.417 -55.250 -26.006 1.00 43.51 C
ATOM 12 O2' C A1347 2.993 -56.547 -26.348 1.00 38.97 O
ATOM 13 C1' C A1347 4.887 -55.329 -25.646 1.00 42.46 C
ATOM 14 N1 C A1347 5.258 -54.376 -24.598 1.00 36.28 N
ATOM 15 C2 C A1347 4.825 -54.569 -23.305 1.00 45.30 C
ATOM 16 O2 C A1347 4.108 -55.545 -23.082 1.00 52.08 O
ATOM 17 N3 C A1347 5.187 -53.702 -22.347 1.00 42.63 N
ATOM 18 C4 C A1347 5.965 -52.683 -22.655 1.00 43.97 C
ATOM 19 N4 C A1347 6.331 -51.828 -21.713 1.00 51.39 N
ATOM 20 C5 C A1347 6.423 -52.468 -23.963 1.00 48.29 C
ATOM 21 C6 C A1347 6.052 -53.338 -24.896 1.00 43.05 C
ATOM 22 P C A1348 1.200 -53.335 -28.126 1.00 44.64 P
ATOM 23 OP1 C A1348 0.331 -53.652 -29.265 1.00 59.38 O
ATOM 24 OP2 C A1348 1.885 -52.020 -28.100 1.00 53.66 O
ATOM 25 O5' C A1348 0.427 -53.570 -26.758 1.00 44.92 O
TER
ATOM 1 O3' U B1345 8.131 -47.137 -23.115 1.00 45.77 O
ATOM 2 P U B1346 7.322 -48.502 -23.300 1.00 38.94 P
ATOM 3 OP1 U B1346 5.932 -48.123 -23.671 1.00 70.35 O
ATOM 4 OP2 U B1346 7.544 -49.324 -22.088 1.00 41.31 O
ATOM 5 O5' U B1346 8.026 -49.138 -24.530 1.00 24.57 O
ATOM 6 C5' U B1346 8.512 -48.295 -25.544 1.00 39.98 C
ATOM 7 C4' U B1346 8.279 -48.893 -26.877 1.00 41.16 C
ATOM 8 O4' U B1346 9.559 -49.258 -27.434 1.00 30.01 O
ATOM 9 C3' U B1346 7.431 -50.142 -26.848 1.00 49.93 C
ATOM 10 O3' U B1346 6.479 -50.107 -27.977 1.00 37.97 O
ATOM 11 C2' U B1346 8.497 -51.280 -26.823 1.00 33.61 C
ATOM 12 O2' U B1346 8.144 -52.497 -27.414 1.00 48.57 O
ATOM 13 C1' U B1346 9.723 -50.657 -27.477 1.00 38.49 C
ATOM 14 N1 U B1346 11.025 -50.976 -26.783 1.00 45.90 N
ATOM 15 C2 U B1346 11.986 -51.833 -27.337 1.00 43.99 C
ATOM 16 O2 U B1346 11.881 -52.440 -28.365 1.00 48.65 O
ATOM 17 N3 U B1346 13.144 -52.030 -26.663 1.00 39.20 N
ATOM 18 C4 U B1346 13.495 -51.450 -25.481 1.00 45.02 C
ATOM 19 O4 U B1346 14.586 -51.742 -24.981 1.00 42.48 O
ATOM 20 C5 U B1346 12.504 -50.556 -24.968 1.00 40.71 C
ATOM 21 C6 U B1346 11.350 -50.344 -25.614 1.00 39.38 C
ATOM 22 P C B1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 23 OP1 C B1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 24 OP2 C B1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 25 O5' C B1347 5.597 -52.491 -28.190 1.00 30.87 O
TER
ATOM 2 P C A1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 3 OP1 C A1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 4 OP2 C A1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 5 O5' C A1347 5.597 -52.491 -28.190 1.00 30.87 O
ATOM 6 C5' C A1347 5.345 -53.742 -28.832 1.00 33.72 C
ATOM 7 C4' C A1347 4.735 -54.756 -27.906 1.00 37.38 C
ATOM 8 O4' C A1347 5.628 -55.032 -26.804 1.00 45.35 O
ATOM 9 C3' C A1347 3.452 -54.346 -27.235 1.00 48.56 C
ATOM 10 O3' C A1347 2.326 -54.478 -28.082 1.00 52.84 O
ATOM 11 C2' C A1347 3.417 -55.250 -26.006 1.00 43.51 C
ATOM 12 O2' C A1347 2.993 -56.547 -26.348 1.00 38.97 O
ATOM 13 C1' C A1347 4.887 -55.329 -25.646 1.00 42.46 C
ATOM 14 N1 C A1347 5.258 -54.376 -24.598 1.00 36.28 N
ATOM 15 C2 C A1347 4.825 -54.569 -23.305 1.00 45.30 C
ATOM 16 O2 C A1347 4.108 -55.545 -23.082 1.00 52.08 O
ATOM 17 N3 C A1347 5.187 -53.702 -22.347 1.00 42.63 N
ATOM 18 C4 C A1347 5.965 -52.683 -22.655 1.00 43.97 C
ATOM 19 N4 C A1347 6.331 -51.828 -21.713 1.00 51.39 N
ATOM 20 C5 C A1347 6.423 -52.468 -23.963 1.00 48.29 C
ATOM 21 C6 C A1347 6.052 -53.338 -24.896 1.00 43.05 C
ATOM 22 P C A1348 1.200 -53.335 -28.126 1.00 44.64 P
ATOM 23 OP1 C A1348 0.331 -53.652 -29.265 1.00 59.38 O
ATOM 24 OP2 C A1348 1.885 -52.020 -28.100 1.00 53.66 O
ATOM 25 O5' C A1348 0.427 -53.570 -26.758 1.00 44.92 O
TER
ATOM 1 O3' U B1345 8.131 -47.137 -23.115 1.00 45.77 O
ATOM 2 P U B1346 7.322 -48.502 -23.300 1.00 38.94 P
ATOM 3 OP1 U B1346 5.932 -48.123 -23.671 1.00 70.35 O
ATOM 4 OP2 U B1346 7.544 -49.324 -22.088 1.00 41.31 O
ATOM 5 O5' U B1346 8.026 -49.138 -24.530 1.00 24.57 O
ATOM 6 C5' U B1346 8.512 -48.295 -25.544 1.00 39.98 C
ATOM 7 C4' U B1346 8.279 -48.893 -26.877 1.00 41.16 C
ATOM 8 O4' U B1346 9.559 -49.258 -27.434 1.00 30.01 O
ATOM 9 C3' U B1346 7.431 -50.142 -26.848 1.00 49.93 C
ATOM 10 O3' U B1346 6.479 -50.107 -27.977 1.00 37.97 O
ATOM 11 C2' U B1346 8.497 -51.280 -26.823 1.00 33.61 C
ATOM 12 O2' U B1346 8.144 -52.497 -27.414 1.00 48.57 O
ATOM 13 C1' U B1346 9.723 -50.657 -27.477 1.00 38.49 C
ATOM 14 N1 U B1346 11.025 -50.976 -26.783 1.00 45.90 N
ATOM 15 C2 U B1346 11.986 -51.833 -27.337 1.00 43.99 C
ATOM 16 O2 U B1346 11.881 -52.440 -28.365 1.00 48.65 O
ATOM 17 N3 U B1346 13.144 -52.030 -26.663 1.00 39.20 N
ATOM 18 C4 U B1346 13.495 -51.450 -25.481 1.00 45.02 C
ATOM 19 O4 U B1346 14.586 -51.742 -24.981 1.00 42.48 O
ATOM 20 C5 U B1346 12.504 -50.556 -24.968 1.00 40.71 C
ATOM 21 C6 U B1346 11.350 -50.344 -25.614 1.00 39.38 C
ATOM 22 P C B1347 6.217 -51.286 -29.039 1.00 31.65 P
ATOM 23 OP1 C B1347 7.524 -51.672 -29.598 1.00 51.60 O
ATOM 24 OP2 C B1347 5.210 -50.790 -29.962 1.00 50.83 O
ATOM 25 O5' C B1347 5.597 -52.491 -28.190 1.00 30.87 O
TER
Atoms:
C2: (4.825,-54.569,-23.305)
OP1: (7.524,-51.672,-29.598)
OP2: (5.210,-50.790,-29.962)
C4: (5.965,-52.683,-22.655)
O5': (5.597,-52.491,-28.190)
C3': (3.452,-54.346,-27.235)
C1': (4.887,-55.329,-25.646)
O4': (5.628,-55.032,-26.804)
C5': (5.345,-53.742,-28.832)
P: (6.217,-51.286,-29.039)
O2: (4.108,-55.545,-23.082)
C4': (4.735,-54.756,-27.906)
C2': (3.417,-55.250,-26.006)
O2': (2.993,-56.547,-26.348)
N1: (5.258,-54.376,-24.598)
N3: (5.187,-53.702,-22.347)
N4: (6.331,-51.828,-21.713)
C6: (6.052,-53.338,-24.896)
C5: (6.423,-52.468,-23.963)
O3': (2.326,-54.478,-28.082)
OP1: (7.524,-51.672,-29.598)
OP2: (5.210,-50.790,-29.962)
C4: (5.965,-52.683,-22.655)
O5': (5.597,-52.491,-28.190)
C3': (3.452,-54.346,-27.235)
C1': (4.887,-55.329,-25.646)
O4': (5.628,-55.032,-26.804)
C5': (5.345,-53.742,-28.832)
P: (6.217,-51.286,-29.039)
O2: (4.108,-55.545,-23.082)
C4': (4.735,-54.756,-27.906)
C2': (3.417,-55.250,-26.006)
O2': (2.993,-56.547,-26.348)
N1: (5.258,-54.376,-24.598)
N3: (5.187,-53.702,-22.347)
N4: (6.331,-51.828,-21.713)
C6: (6.052,-53.338,-24.896)
C5: (6.423,-52.468,-23.963)
O3': (2.326,-54.478,-28.082)
C4: (13.495,-51.450,-25.481)
N3: (13.144,-52.030,-26.663)
OP1: (5.932,-48.123,-23.671)
OP2: (7.544,-49.324,-22.088)
C2: (11.986,-51.833,-27.337)
C1': (9.723,-50.657,-27.477)
C3': (7.431,-50.142,-26.848)
O5': (8.026,-49.138,-24.530)
O4': (9.559,-49.258,-27.434)
C5': (8.512,-48.295,-25.544)
P: (7.322,-48.502,-23.300)
C4': (8.279,-48.893,-26.877)
C2': (8.497,-51.280,-26.823)
O2': (8.144,-52.497,-27.414)
N1: (11.025,-50.976,-26.783)
O4: (14.586,-51.742,-24.981)
O2: (11.881,-52.440,-28.365)
C6: (11.350,-50.344,-25.614)
C5: (12.504,-50.556,-24.968)
O3': (6.479,-50.107,-27.977)
N3: (13.144,-52.030,-26.663)
OP1: (5.932,-48.123,-23.671)
OP2: (7.544,-49.324,-22.088)
C2: (11.986,-51.833,-27.337)
C1': (9.723,-50.657,-27.477)
C3': (7.431,-50.142,-26.848)
O5': (8.026,-49.138,-24.530)
O4': (9.559,-49.258,-27.434)
C5': (8.512,-48.295,-25.544)
P: (7.322,-48.502,-23.300)
C4': (8.279,-48.893,-26.877)
C2': (8.497,-51.280,-26.823)
O2': (8.144,-52.497,-27.414)
N1: (11.025,-50.976,-26.783)
O4: (14.586,-51.742,-24.981)
O2: (11.881,-52.440,-28.365)
C6: (11.350,-50.344,-25.614)
C5: (12.504,-50.556,-24.968)
O3': (6.479,-50.107,-27.977)
Image (generated by PyMOL):