ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZH5:B19:B18

Extra

PDB:
ATOM 1 O3' U A 18 40.289 -28.470 -13.256 1.00 71.79 O
ATOM 2 P C A 19 39.219 -27.458 -12.602 1.00 64.28 P
ATOM 3 OP1 C A 19 38.589 -27.985 -11.366 1.00 66.40 O
ATOM 4 OP2 C A 19 38.369 -26.934 -13.706 1.00 61.88 O
ATOM 5 O5' C A 19 40.119 -26.258 -12.087 1.00 62.21 O
ATOM 6 C5' C A 19 40.832 -25.478 -13.001 1.00 59.87 C
ATOM 7 C4' C A 19 42.132 -25.031 -12.405 1.00 57.38 C
ATOM 8 O4' C A 19 42.972 -26.156 -12.037 1.00 55.89 O
ATOM 9 C3' C A 19 42.921 -24.287 -13.448 1.00 55.86 C
ATOM 10 O3' C A 19 42.438 -22.968 -13.456 1.00 54.12 O
ATOM 11 C2' C A 19 44.355 -24.484 -13.002 1.00 54.98 C
ATOM 12 O2' C A 19 44.716 -23.584 -11.977 1.00 54.26 O
ATOM 13 C1' C A 19 44.296 -25.929 -12.495 1.00 54.18 C
ATOM 14 N1 C A 19 44.568 -26.946 -13.521 1.00 53.75 N
ATOM 15 C2 C A 19 45.844 -27.028 -14.099 1.00 53.61 C
ATOM 16 O2 C A 19 46.701 -26.192 -13.787 1.00 53.37 O
ATOM 17 N3 C A 19 46.104 -28.022 -14.986 1.00 53.80 N
ATOM 18 C4 C A 19 45.146 -28.903 -15.302 1.00 53.75 C
ATOM 19 N4 C A 19 45.454 -29.893 -16.151 1.00 52.77 N
ATOM 20 C5 C A 19 43.829 -28.813 -14.756 1.00 52.60 C
ATOM 21 C6 C A 19 43.587 -27.828 -13.885 1.00 53.04 C
ATOM 22 P C A 20 41.786 -22.406 -14.793 1.00 54.88 P
ATOM 23 OP1 C A 20 40.954 -21.212 -14.496 1.00 54.38 O
ATOM 24 OP2 C A 20 41.177 -23.571 -15.484 1.00 53.78 O
ATOM 25 O5' C A 20 43.088 -21.954 -15.579 1.00 51.76 O
TER

ATOM 1 O3' U B 17 40.927 -32.737 -17.548 1.00 82.25 O
ATOM 2 P U B 18 41.927 -31.639 -16.916 1.00 71.50 P
ATOM 3 OP1 U B 18 41.991 -30.490 -17.858 1.00 72.22 O
ATOM 4 OP2 U B 18 43.182 -32.305 -16.499 1.00 71.25 O
ATOM 5 O5' U B 18 41.173 -31.135 -15.612 1.00 71.05 O
ATOM 6 C5' U B 18 39.990 -30.364 -15.723 1.00 70.89 C
ATOM 7 C4' U B 18 39.266 -30.359 -14.411 1.00 71.18 C
ATOM 8 O4' U B 18 38.926 -31.726 -14.067 1.00 70.95 O
ATOM 9 C3' U B 18 40.089 -29.895 -13.224 1.00 71.90 C
ATOM 10 O3' U B 18 40.289 -28.470 -13.256 1.00 71.79 O
ATOM 11 C2' U B 18 39.364 -30.545 -12.047 1.00 72.29 C
ATOM 12 O2' U B 18 38.148 -29.938 -11.665 1.00 74.56 O
ATOM 13 C1' U B 18 38.951 -31.882 -12.657 1.00 72.11 C
ATOM 14 N1 U B 18 39.783 -33.044 -12.310 1.00 71.92 N
ATOM 15 C2 U B 18 39.669 -33.555 -11.024 1.00 71.40 C
ATOM 16 O2 U B 18 38.978 -33.037 -10.160 1.00 69.65 O
ATOM 17 N3 U B 18 40.400 -34.694 -10.790 1.00 71.55 N
ATOM 18 C4 U B 18 41.228 -35.354 -11.688 1.00 72.11 C
ATOM 19 O4 U B 18 41.745 -36.429 -11.363 1.00 71.91 O
ATOM 20 C5 U B 18 41.324 -34.734 -12.976 1.00 71.21 C
ATOM 21 C6 U B 18 40.620 -33.628 -13.236 1.00 71.68 C
ATOM 22 P C B 19 39.219 -27.458 -12.602 1.00 64.28 P
ATOM 23 OP1 C B 19 38.589 -27.985 -11.366 1.00 66.40 O
ATOM 24 OP2 C B 19 38.369 -26.934 -13.706 1.00 61.88 O
ATOM 25 O5' C B 19 40.119 -26.258 -12.087 1.00 62.21 O
TER

Atoms:
C2: (45.844,-27.028,-14.099)
OP1: (38.589,-27.985,-11.366)
OP2: (38.369,-26.934,-13.706)
C4: (45.146,-28.903,-15.302)
O5': (40.119,-26.258,-12.087)
C3': (42.921,-24.287,-13.448)
C1': (44.296,-25.929,-12.495)
O4': (42.972,-26.156,-12.037)
C5': (40.832,-25.478,-13.001)
P: (39.219,-27.458,-12.602)
O2: (46.701,-26.192,-13.787)
C4': (42.132,-25.031,-12.405)
C2': (44.355,-24.484,-13.002)
O2': (44.716,-23.584,-11.977)
N1: (44.568,-26.946,-13.521)
N3: (46.104,-28.022,-14.986)
N4: (45.454,-29.893,-16.151)
C6: (43.587,-27.828,-13.885)
C5: (43.829,-28.813,-14.756)
O3': (42.438,-22.968,-13.456)
C4: (41.228,-35.354,-11.688)
N3: (40.400,-34.694,-10.790)
OP1: (41.991,-30.490,-17.858)
OP2: (43.182,-32.305,-16.499)
C2: (39.669,-33.555,-11.024)
C1': (38.951,-31.882,-12.657)
C3': (40.089,-29.895,-13.224)
O5': (41.173,-31.135,-15.612)
O4': (38.926,-31.726,-14.067)
C5': (39.990,-30.364,-15.723)
P: (41.927,-31.639,-16.916)
C4': (39.266,-30.359,-14.411)
C2': (39.364,-30.545,-12.047)
O2': (38.148,-29.938,-11.665)
N1: (39.783,-33.044,-12.310)
O4: (41.745,-36.429,-11.363)
O2: (38.978,-33.037,-10.160)
C6: (40.620,-33.628,-13.236)
C5: (41.324,-34.734,-12.976)
O3': (40.289,-28.470,-13.256)
Image (generated by PyMOL):
PyMOL image
show in jmol