Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:191:141
Extra
PDB:
ATOM 1 O3' C A 90 40.940 -44.083 84.689 1.00 42.74 O
ATOM 2 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 3 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 4 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 5 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
ATOM 6 C5' G A 91 41.757 -41.233 83.254 1.00 36.24 C
ATOM 7 C4' G A 91 41.345 -39.822 83.091 1.00 35.94 C
ATOM 8 O4' G A 91 40.289 -39.515 83.992 1.00 35.96 O
ATOM 9 C3' G A 91 42.389 -38.808 83.457 1.00 35.81 C
ATOM 10 O3' G A 91 43.395 -38.703 82.472 1.00 35.72 O
ATOM 11 C2' G A 91 41.556 -37.541 83.636 1.00 35.59 C
ATOM 12 O2' G A 91 41.226 -36.980 82.384 1.00 35.36 O
ATOM 13 C1' G A 91 40.290 -38.118 84.232 1.00 35.73 C
ATOM 14 N9 G A 91 40.116 -37.849 85.679 1.00 35.84 N
ATOM 15 C8 G A 91 40.021 -38.809 86.657 1.00 36.13 C
ATOM 16 N7 G A 91 39.745 -38.309 87.814 1.00 36.18 N
ATOM 17 C5 G A 91 39.630 -36.947 87.587 1.00 35.91 C
ATOM 18 C6 G A 91 39.271 -35.910 88.467 1.00 35.85 C
ATOM 19 O6 G A 91 39.020 -35.959 89.675 1.00 36.02 O
ATOM 20 N1 G A 91 39.222 -34.700 87.846 1.00 35.58 N
ATOM 21 C2 G A 91 39.466 -34.482 86.549 1.00 35.38 C
ATOM 22 N2 G A 91 39.349 -33.203 86.177 1.00 35.15 N
ATOM 23 N3 G A 91 39.791 -35.446 85.709 1.00 35.44 N
ATOM 24 C4 G A 91 39.853 -36.646 86.288 1.00 35.70 C
ATOM 25 P A A 92 44.899 -38.420 82.883 1.00 33.95 P
ATOM 26 OP1 A A 92 45.676 -38.542 81.638 1.00 33.88 O
ATOM 27 OP2 A A 92 45.226 -39.302 84.012 1.00 34.24 O
ATOM 28 O5' A A 92 44.819 -36.899 83.380 1.00 33.73 O
TER
ATOM 1 O3' A B 40 31.574 -29.430 92.911 1.00 42.56 O
ATOM 2 P U B 41 32.680 -29.436 94.053 1.00 38.45 P
ATOM 3 OP1 U B 41 32.027 -29.097 95.336 1.00 38.64 O
ATOM 4 OP2 U B 41 33.802 -28.566 93.556 1.00 38.25 O
ATOM 5 O5' U B 41 33.152 -30.936 94.055 1.00 38.63 O
ATOM 6 C5' U B 41 32.314 -31.939 94.565 1.00 38.86 C
ATOM 7 C4' U B 41 32.908 -33.293 94.344 1.00 38.99 C
ATOM 8 O4' U B 41 32.796 -33.670 92.961 1.00 38.83 O
ATOM 9 C3' U B 41 34.385 -33.435 94.613 1.00 39.04 C
ATOM 10 O3' U B 41 34.683 -33.432 95.983 1.00 39.28 O
ATOM 11 C2' U B 41 34.660 -34.749 93.932 1.00 39.12 C
ATOM 12 O2' U B 41 34.141 -35.823 94.688 1.00 39.42 O
ATOM 13 C1' U B 41 33.803 -34.597 92.666 1.00 38.90 C
ATOM 14 N1 U B 41 34.598 -34.069 91.589 1.00 38.65 N
ATOM 15 C2 U B 41 35.512 -34.994 91.153 1.00 38.72 C
ATOM 16 O2 U B 41 35.515 -36.153 91.576 1.00 38.96 O
ATOM 17 N3 U B 41 36.380 -34.535 90.216 1.00 38.51 N
ATOM 18 C4 U B 41 36.362 -33.281 89.737 1.00 38.26 C
ATOM 19 O4 U B 41 37.167 -33.046 88.897 1.00 38.11 O
ATOM 20 C5 U B 41 35.418 -32.374 90.258 1.00 38.21 C
ATOM 21 C6 U B 41 34.559 -32.774 91.189 1.00 38.40 C
ATOM 22 P A B 42 36.069 -32.795 96.539 1.00 36.73 P
ATOM 23 OP1 A B 42 36.364 -33.490 97.828 1.00 37.07 O
ATOM 24 OP2 A B 42 35.930 -31.316 96.521 1.00 36.53 O
ATOM 25 O5' A B 42 37.138 -33.229 95.463 1.00 36.60 O
TER
ATOM 2 P G A 91 40.766 -43.637 83.167 1.00 36.70 P
ATOM 3 OP1 G A 91 39.447 -44.175 82.697 1.00 36.75 O
ATOM 4 OP2 G A 91 41.989 -44.019 82.447 1.00 36.74 O
ATOM 5 O5' G A 91 40.650 -42.060 83.281 1.00 36.38 O
ATOM 6 C5' G A 91 41.757 -41.233 83.254 1.00 36.24 C
ATOM 7 C4' G A 91 41.345 -39.822 83.091 1.00 35.94 C
ATOM 8 O4' G A 91 40.289 -39.515 83.992 1.00 35.96 O
ATOM 9 C3' G A 91 42.389 -38.808 83.457 1.00 35.81 C
ATOM 10 O3' G A 91 43.395 -38.703 82.472 1.00 35.72 O
ATOM 11 C2' G A 91 41.556 -37.541 83.636 1.00 35.59 C
ATOM 12 O2' G A 91 41.226 -36.980 82.384 1.00 35.36 O
ATOM 13 C1' G A 91 40.290 -38.118 84.232 1.00 35.73 C
ATOM 14 N9 G A 91 40.116 -37.849 85.679 1.00 35.84 N
ATOM 15 C8 G A 91 40.021 -38.809 86.657 1.00 36.13 C
ATOM 16 N7 G A 91 39.745 -38.309 87.814 1.00 36.18 N
ATOM 17 C5 G A 91 39.630 -36.947 87.587 1.00 35.91 C
ATOM 18 C6 G A 91 39.271 -35.910 88.467 1.00 35.85 C
ATOM 19 O6 G A 91 39.020 -35.959 89.675 1.00 36.02 O
ATOM 20 N1 G A 91 39.222 -34.700 87.846 1.00 35.58 N
ATOM 21 C2 G A 91 39.466 -34.482 86.549 1.00 35.38 C
ATOM 22 N2 G A 91 39.349 -33.203 86.177 1.00 35.15 N
ATOM 23 N3 G A 91 39.791 -35.446 85.709 1.00 35.44 N
ATOM 24 C4 G A 91 39.853 -36.646 86.288 1.00 35.70 C
ATOM 25 P A A 92 44.899 -38.420 82.883 1.00 33.95 P
ATOM 26 OP1 A A 92 45.676 -38.542 81.638 1.00 33.88 O
ATOM 27 OP2 A A 92 45.226 -39.302 84.012 1.00 34.24 O
ATOM 28 O5' A A 92 44.819 -36.899 83.380 1.00 33.73 O
TER
ATOM 1 O3' A B 40 31.574 -29.430 92.911 1.00 42.56 O
ATOM 2 P U B 41 32.680 -29.436 94.053 1.00 38.45 P
ATOM 3 OP1 U B 41 32.027 -29.097 95.336 1.00 38.64 O
ATOM 4 OP2 U B 41 33.802 -28.566 93.556 1.00 38.25 O
ATOM 5 O5' U B 41 33.152 -30.936 94.055 1.00 38.63 O
ATOM 6 C5' U B 41 32.314 -31.939 94.565 1.00 38.86 C
ATOM 7 C4' U B 41 32.908 -33.293 94.344 1.00 38.99 C
ATOM 8 O4' U B 41 32.796 -33.670 92.961 1.00 38.83 O
ATOM 9 C3' U B 41 34.385 -33.435 94.613 1.00 39.04 C
ATOM 10 O3' U B 41 34.683 -33.432 95.983 1.00 39.28 O
ATOM 11 C2' U B 41 34.660 -34.749 93.932 1.00 39.12 C
ATOM 12 O2' U B 41 34.141 -35.823 94.688 1.00 39.42 O
ATOM 13 C1' U B 41 33.803 -34.597 92.666 1.00 38.90 C
ATOM 14 N1 U B 41 34.598 -34.069 91.589 1.00 38.65 N
ATOM 15 C2 U B 41 35.512 -34.994 91.153 1.00 38.72 C
ATOM 16 O2 U B 41 35.515 -36.153 91.576 1.00 38.96 O
ATOM 17 N3 U B 41 36.380 -34.535 90.216 1.00 38.51 N
ATOM 18 C4 U B 41 36.362 -33.281 89.737 1.00 38.26 C
ATOM 19 O4 U B 41 37.167 -33.046 88.897 1.00 38.11 O
ATOM 20 C5 U B 41 35.418 -32.374 90.258 1.00 38.21 C
ATOM 21 C6 U B 41 34.559 -32.774 91.189 1.00 38.40 C
ATOM 22 P A B 42 36.069 -32.795 96.539 1.00 36.73 P
ATOM 23 OP1 A B 42 36.364 -33.490 97.828 1.00 37.07 O
ATOM 24 OP2 A B 42 35.930 -31.316 96.521 1.00 36.53 O
ATOM 25 O5' A B 42 37.138 -33.229 95.463 1.00 36.60 O
TER
Atoms:
OP1: (39.447,-44.175,82.697)
OP2: (41.989,-44.019,82.447)
C3': (42.389,-38.808,83.457)
C1': (40.290,-38.118,84.232)
C5': (41.757,-41.233,83.254)
O6: (39.020,-35.959,89.675)
O4': (40.289,-39.515,83.992)
C8: (40.021,-38.809,86.657)
C2: (39.466,-34.482,86.549)
C6: (39.271,-35.910,88.467)
C5: (39.630,-36.947,87.587)
C4: (39.853,-36.646,86.288)
P: (40.766,-43.637,83.167)
C4': (41.345,-39.822,83.091)
C2': (41.556,-37.541,83.636)
O2': (41.226,-36.980,82.384)
N1: (39.222,-34.700,87.846)
N2: (39.349,-33.203,86.177)
N3: (39.791,-35.446,85.709)
N7: (39.745,-38.309,87.814)
N9: (40.116,-37.849,85.679)
O5': (40.650,-42.060,83.281)
O3': (43.395,-38.703,82.472)
OP2: (41.989,-44.019,82.447)
C3': (42.389,-38.808,83.457)
C1': (40.290,-38.118,84.232)
C5': (41.757,-41.233,83.254)
O6: (39.020,-35.959,89.675)
O4': (40.289,-39.515,83.992)
C8: (40.021,-38.809,86.657)
C2: (39.466,-34.482,86.549)
C6: (39.271,-35.910,88.467)
C5: (39.630,-36.947,87.587)
C4: (39.853,-36.646,86.288)
P: (40.766,-43.637,83.167)
C4': (41.345,-39.822,83.091)
C2': (41.556,-37.541,83.636)
O2': (41.226,-36.980,82.384)
N1: (39.222,-34.700,87.846)
N2: (39.349,-33.203,86.177)
N3: (39.791,-35.446,85.709)
N7: (39.745,-38.309,87.814)
N9: (40.116,-37.849,85.679)
O5': (40.650,-42.060,83.281)
O3': (43.395,-38.703,82.472)
C4: (36.362,-33.281,89.737)
N3: (36.380,-34.535,90.216)
OP1: (32.027,-29.097,95.336)
OP2: (33.802,-28.566,93.556)
C2: (35.512,-34.994,91.153)
C1': (33.803,-34.597,92.666)
C3': (34.385,-33.435,94.613)
O5': (33.152,-30.936,94.055)
O4': (32.796,-33.670,92.961)
C5': (32.314,-31.939,94.565)
P: (32.680,-29.436,94.053)
C4': (32.908,-33.293,94.344)
C2': (34.660,-34.749,93.932)
O2': (34.141,-35.823,94.688)
N1: (34.598,-34.069,91.589)
O4: (37.167,-33.046,88.897)
O2: (35.515,-36.153,91.576)
C6: (34.559,-32.774,91.189)
C5: (35.418,-32.374,90.258)
O3': (34.683,-33.432,95.983)
N3: (36.380,-34.535,90.216)
OP1: (32.027,-29.097,95.336)
OP2: (33.802,-28.566,93.556)
C2: (35.512,-34.994,91.153)
C1': (33.803,-34.597,92.666)
C3': (34.385,-33.435,94.613)
O5': (33.152,-30.936,94.055)
O4': (32.796,-33.670,92.961)
C5': (32.314,-31.939,94.565)
P: (32.680,-29.436,94.053)
C4': (32.908,-33.293,94.344)
C2': (34.660,-34.749,93.932)
O2': (34.141,-35.823,94.688)
N1: (34.598,-34.069,91.589)
O4: (37.167,-33.046,88.897)
O2: (35.515,-36.153,91.576)
C6: (34.559,-32.774,91.189)
C5: (35.418,-32.374,90.258)
O3': (34.683,-33.432,95.983)
Image (generated by PyMOL):