ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0B:B13:B45

Extra

PDB:
ATOM 1 O3' A A 12 17.485 29.588 20.054 1.00 58.40 O
ATOM 2 P G A 13 17.615 31.189 20.093 1.00 64.55 P
ATOM 3 OP1 G A 13 17.333 31.679 18.720 1.00 73.62 O
ATOM 4 OP2 G A 13 18.877 31.577 20.774 1.00 68.00 O
ATOM 5 O5' G A 13 16.423 31.651 21.027 1.00 69.22 O
ATOM 6 C5' G A 13 15.119 31.127 20.820 1.00 71.61 C
ATOM 7 C4' G A 13 14.363 31.141 22.107 1.00 69.57 C
ATOM 8 O4' G A 13 15.039 30.308 23.066 1.00 66.51 O
ATOM 9 C3' G A 13 14.275 32.490 22.787 1.00 74.78 C
ATOM 10 O3' G A 13 13.184 33.172 22.164 1.00 86.91 O
ATOM 11 C2' G A 13 13.994 32.102 24.239 1.00 76.64 C
ATOM 12 O2' G A 13 12.619 31.872 24.474 1.00 90.78 O
ATOM 13 C1' G A 13 14.701 30.748 24.358 1.00 68.25 C
ATOM 14 N9 G A 13 15.874 30.659 25.218 1.00 58.84 N
ATOM 15 C8 G A 13 17.190 30.857 24.879 1.00 61.86 C
ATOM 16 N7 G A 13 18.010 30.661 25.876 1.00 58.75 N
ATOM 17 C5 G A 13 17.181 30.327 26.939 1.00 59.03 C
ATOM 18 C6 G A 13 17.489 30.013 28.288 1.00 57.68 C
ATOM 19 O6 G A 13 18.593 29.967 28.840 1.00 62.53 O
ATOM 20 N1 G A 13 16.346 29.736 29.019 1.00 55.73 N
ATOM 21 C2 G A 13 15.072 29.753 28.520 1.00 53.61 C
ATOM 22 N2 G A 13 14.097 29.444 29.380 1.00 57.64 N
ATOM 23 N3 G A 13 14.770 30.048 27.273 1.00 50.67 N
ATOM 24 C4 G A 13 15.863 30.325 26.545 1.00 54.26 C
ATOM 25 P C A 14 12.679 34.592 22.720 1.00 99.59 P
ATOM 26 OP1 C A 14 11.612 34.337 23.728 1.00103.21 O
ATOM 27 OP2 C A 14 12.363 35.404 21.521 1.00100.92 O
ATOM 28 O5' C A 14 13.940 35.226 23.465 1.00102.08 O
TER

ATOM 1 O3' U B 44 14.459 28.277 38.898 1.00100.10 O
ATOM 2 P C B 45 14.586 29.868 38.657 1.00 92.74 P
ATOM 3 OP1 C B 45 14.602 30.545 39.976 1.00 97.32 O
ATOM 4 OP2 C B 45 13.600 30.293 37.627 1.00 86.43 O
ATOM 5 O5' C B 45 16.031 30.060 38.018 1.00 88.33 O
ATOM 6 C5' C B 45 16.958 28.959 37.889 1.00 77.42 C
ATOM 7 C4' C B 45 17.502 28.918 36.482 1.00 69.20 C
ATOM 8 O4' C B 45 16.470 28.503 35.576 1.00 66.81 O
ATOM 9 C3' C B 45 18.024 30.252 35.974 1.00 65.79 C
ATOM 10 O3' C B 45 19.425 30.156 36.201 1.00 57.69 O
ATOM 11 C2' C B 45 17.671 30.281 34.483 1.00 67.81 C
ATOM 12 O2' C B 45 18.773 29.971 33.664 1.00 86.82 O
ATOM 13 C1' C B 45 16.630 29.163 34.351 1.00 66.23 C
ATOM 14 N1 C B 45 15.300 29.430 33.801 1.00 59.18 N
ATOM 15 C2 C B 45 15.152 29.538 32.428 1.00 59.96 C
ATOM 16 O2 C B 45 16.164 29.563 31.713 1.00 64.43 O
ATOM 17 N3 C B 45 13.911 29.615 31.905 1.00 64.07 N
ATOM 18 C4 C B 45 12.850 29.613 32.709 1.00 62.35 C
ATOM 19 N4 C B 45 11.642 29.631 32.147 1.00 70.58 N
ATOM 20 C5 C B 45 12.979 29.580 34.120 1.00 62.74 C
ATOM 21 C6 C B 45 14.211 29.499 34.620 1.00 62.87 C
ATOM 22 P C B 46 20.421 31.324 35.748 1.00 58.03 P
ATOM 23 OP1 C B 46 19.785 32.648 35.957 1.00 62.28 O
ATOM 24 OP2 C B 46 21.002 30.988 34.429 1.00 61.62 O
ATOM 25 O5' C B 46 21.605 31.143 36.790 1.00 59.48 O
TER

Atoms:
OP1: (17.333,31.679,18.720)
OP2: (18.877,31.577,20.774)
C3': (14.275,32.490,22.787)
C1': (14.701,30.748,24.358)
C5': (15.119,31.127,20.820)
O6: (18.593,29.967,28.840)
O4': (15.039,30.308,23.066)
C8: (17.190,30.857,24.879)
C2: (15.072,29.753,28.520)
C6: (17.489,30.013,28.288)
C5: (17.181,30.327,26.939)
C4: (15.863,30.325,26.545)
P: (17.615,31.189,20.093)
C4': (14.363,31.141,22.107)
C2': (13.994,32.102,24.239)
O2': (12.619,31.872,24.474)
N1: (16.346,29.736,29.019)
N2: (14.097,29.444,29.380)
N3: (14.770,30.048,27.273)
N7: (18.010,30.661,25.876)
N9: (15.874,30.659,25.218)
O5': (16.423,31.651,21.027)
O3': (13.184,33.172,22.164)
C2: (15.152,29.538,32.428)
OP1: (14.602,30.545,39.976)
OP2: (13.600,30.293,37.627)
C4: (12.850,29.613,32.709)
O5': (16.031,30.060,38.018)
C3': (18.024,30.252,35.974)
C1': (16.630,29.163,34.351)
O4': (16.470,28.503,35.576)
C5': (16.958,28.959,37.889)
P: (14.586,29.868,38.657)
O2: (16.164,29.563,31.713)
C4': (17.502,28.918,36.482)
C2': (17.671,30.281,34.483)
O2': (18.773,29.971,33.664)
N1: (15.300,29.430,33.801)
N3: (13.911,29.615,31.905)
N4: (11.642,29.631,32.147)
C6: (14.211,29.499,34.620)
C5: (12.979,29.580,34.120)
O3': (19.425,30.156,36.201)
Image (generated by PyMOL):
PyMOL image
show in jmol