ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRS:B13:B45

Extra

PDB:
ATOM 1 O3' A A 12 19.663 28.729 19.710 1.00 40.13 O
ATOM 2 P G A 13 19.397 30.308 19.844 1.00 41.84 P
ATOM 3 OP1 G A 13 18.971 30.820 18.514 1.00 42.78 O
ATOM 4 OP2 G A 13 20.553 30.925 20.536 1.00 43.34 O
ATOM 5 O5' G A 13 18.179 30.440 20.855 1.00 45.09 O
ATOM 6 C5' G A 13 16.867 30.044 20.497 1.00 45.93 C
ATOM 7 C4' G A 13 15.961 30.255 21.671 1.00 47.51 C
ATOM 8 O4' G A 13 16.437 29.431 22.755 1.00 47.36 O
ATOM 9 C3' G A 13 15.995 31.672 22.220 1.00 50.28 C
ATOM 10 O3' G A 13 15.098 32.463 21.427 1.00 54.75 O
ATOM 11 C2' G A 13 15.665 31.495 23.702 1.00 50.25 C
ATOM 12 O2' G A 13 14.293 31.516 24.012 1.00 53.40 O
ATOM 13 C1' G A 13 16.176 30.079 23.982 1.00 48.49 C
ATOM 14 N9 G A 13 17.336 29.950 24.859 1.00 46.26 N
ATOM 15 C8 G A 13 18.652 30.209 24.568 1.00 45.33 C
ATOM 16 N7 G A 13 19.451 29.975 25.574 1.00 43.65 N
ATOM 17 C5 G A 13 18.609 29.543 26.588 1.00 43.59 C
ATOM 18 C6 G A 13 18.897 29.143 27.914 1.00 43.29 C
ATOM 19 O6 G A 13 19.993 29.083 28.479 1.00 43.24 O
ATOM 20 N1 G A 13 17.747 28.778 28.598 1.00 42.77 N
ATOM 21 C2 G A 13 16.482 28.789 28.071 1.00 42.67 C
ATOM 22 N2 G A 13 15.493 28.382 28.877 1.00 43.24 N
ATOM 23 N3 G A 13 16.200 29.164 26.843 1.00 43.14 N
ATOM 24 C4 G A 13 17.303 29.524 26.162 1.00 44.26 C
ATOM 25 P C A 14 13.921 33.338 22.104 1.00 56.57 P
ATOM 26 OP1 C A 14 12.806 32.439 22.501 1.00 55.53 O
ATOM 27 OP2 C A 14 13.663 34.427 21.128 1.00 58.59 O
ATOM 28 O5' C A 14 14.573 34.026 23.385 1.00 57.62 O
TER

ATOM 1 O3' U B 44 16.366 27.243 38.788 1.00 82.50 O
ATOM 2 P C B 45 16.307 28.842 38.588 1.00 77.70 P
ATOM 3 OP1 C B 45 16.567 29.473 39.909 1.00 78.93 O
ATOM 4 OP2 C B 45 15.066 29.190 37.841 1.00 77.39 O
ATOM 5 O5' C B 45 17.536 29.186 37.632 1.00 72.99 O
ATOM 6 C5' C B 45 18.654 28.305 37.493 1.00 63.53 C
ATOM 7 C4' C B 45 19.125 28.304 36.057 1.00 56.35 C
ATOM 8 O4' C B 45 18.073 27.809 35.220 1.00 54.04 O
ATOM 9 C3' C B 45 19.532 29.668 35.513 1.00 53.01 C
ATOM 10 O3' C B 45 20.967 29.638 35.555 1.00 47.90 O
ATOM 11 C2' C B 45 19.030 29.688 34.060 1.00 53.69 C
ATOM 12 O2' C B 45 20.071 29.536 33.121 1.00 58.37 O
ATOM 13 C1' C B 45 18.130 28.449 33.979 1.00 53.50 C
ATOM 14 N1 C B 45 16.770 28.553 33.442 1.00 52.18 N
ATOM 15 C2 C B 45 16.598 28.575 32.067 1.00 51.36 C
ATOM 16 O2 C B 45 17.592 28.600 31.338 1.00 51.15 O
ATOM 17 N3 C B 45 15.352 28.564 31.558 1.00 51.52 N
ATOM 18 C4 C B 45 14.302 28.542 32.373 1.00 51.90 C
ATOM 19 N4 C B 45 13.092 28.486 31.823 1.00 54.33 N
ATOM 20 C5 C B 45 14.446 28.567 33.784 1.00 51.56 C
ATOM 21 C6 C B 45 15.687 28.579 34.272 1.00 52.32 C
ATOM 22 P C B 46 21.836 30.990 35.528 1.00 42.64 P
ATOM 23 OP1 C B 46 20.965 32.180 35.665 1.00 44.29 O
ATOM 24 OP2 C B 46 22.792 30.900 34.397 1.00 43.33 O
ATOM 25 O5' C B 46 22.720 30.844 36.836 1.00 42.27 O
TER

Atoms:
OP1: (18.971,30.820,18.514)
OP2: (20.553,30.925,20.536)
C3': (15.995,31.672,22.220)
C1': (16.176,30.079,23.982)
C5': (16.867,30.044,20.497)
O6: (19.993,29.083,28.479)
O4': (16.437,29.431,22.755)
C8: (18.652,30.209,24.568)
C2: (16.482,28.789,28.071)
C6: (18.897,29.143,27.914)
C5: (18.609,29.543,26.588)
C4: (17.303,29.524,26.162)
P: (19.397,30.308,19.844)
C4': (15.961,30.255,21.671)
C2': (15.665,31.495,23.702)
O2': (14.293,31.516,24.012)
N1: (17.747,28.778,28.598)
N2: (15.493,28.382,28.877)
N3: (16.200,29.164,26.843)
N7: (19.451,29.975,25.574)
N9: (17.336,29.950,24.859)
O5': (18.179,30.440,20.855)
O3': (15.098,32.463,21.427)
C2: (16.598,28.575,32.067)
OP1: (16.567,29.473,39.909)
OP2: (15.066,29.190,37.841)
C4: (14.302,28.542,32.373)
O5': (17.536,29.186,37.632)
C3': (19.532,29.668,35.513)
C1': (18.130,28.449,33.979)
O4': (18.073,27.809,35.220)
C5': (18.654,28.305,37.493)
P: (16.307,28.842,38.588)
O2: (17.592,28.600,31.338)
C4': (19.125,28.304,36.057)
C2': (19.030,29.688,34.060)
O2': (20.071,29.536,33.121)
N1: (16.770,28.553,33.442)
N3: (15.352,28.564,31.558)
N4: (13.092,28.486,31.823)
C6: (15.687,28.579,34.272)
C5: (14.446,28.567,33.784)
O3': (20.967,29.638,35.555)
Image (generated by PyMOL):
PyMOL image
show in jmol