Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2382:A2487
Extra
PDB:
ATOM 1 O3' U A2381 -27.372 119.220 176.161 1.00 8.50 O
ATOM 2 P G A2382 -26.431 119.988 175.116 1.00 11.75 P
ATOM 3 OP1 G A2382 -24.995 119.676 175.387 1.00 18.74 O
ATOM 4 OP2 G A2382 -26.904 121.393 175.158 1.00 18.74 O
ATOM 5 O5' G A2382 -26.823 119.372 173.700 1.00 29.78 O
ATOM 6 C5' G A2382 -26.666 117.971 173.420 1.00 29.78 C
ATOM 7 C4' G A2382 -26.566 117.759 171.930 1.00 29.78 C
ATOM 8 O4' G A2382 -25.206 118.006 171.481 1.00 29.78 O
ATOM 9 C3' G A2382 -26.848 116.357 171.428 1.00 29.78 C
ATOM 10 O3' G A2382 -28.237 116.117 171.305 1.00 29.78 O
ATOM 11 C2' G A2382 -26.151 116.349 170.074 1.00 29.78 C
ATOM 12 O2' G A2382 -26.924 116.998 169.084 1.00 29.78 O
ATOM 13 C1' G A2382 -24.906 117.178 170.368 1.00 29.78 C
ATOM 14 N9 G A2382 -23.775 116.320 170.706 1.00 27.07 N
ATOM 15 C8 G A2382 -23.340 115.969 171.955 1.00 27.07 C
ATOM 16 N7 G A2382 -22.313 115.166 171.932 1.00 27.07 N
ATOM 17 C5 G A2382 -22.056 114.983 170.586 1.00 27.07 C
ATOM 18 C6 G A2382 -21.057 114.219 169.939 1.00 27.07 C
ATOM 19 O6 G A2382 -20.163 113.519 170.435 1.00 27.07 O
ATOM 20 N1 G A2382 -21.158 114.320 168.569 1.00 27.07 N
ATOM 21 C2 G A2382 -22.089 115.062 167.901 1.00 27.07 C
ATOM 22 N2 G A2382 -22.012 115.041 166.558 1.00 27.07 N
ATOM 23 N3 G A2382 -23.023 115.775 168.490 1.00 27.07 N
ATOM 24 C4 G A2382 -22.948 115.691 169.821 1.00 27.07 C
ATOM 25 P U A2383 -28.783 114.614 171.358 1.00 17.37 P
ATOM 26 OP1 U A2383 -29.929 114.634 172.306 1.00 83.89 O
ATOM 27 OP2 U A2383 -27.672 113.647 171.567 1.00 83.89 O
ATOM 28 O5' U A2383 -29.349 114.384 169.887 1.00 92.85 O
TER
ATOM 1 O3' U B2486 -11.666 117.310 163.405 1.00 37.42 O
ATOM 2 P C B2487 -12.129 115.856 163.906 1.00 43.98 P
ATOM 3 OP1 C B2487 -11.014 115.370 164.749 1.00 4.88 O
ATOM 4 OP2 C B2487 -12.569 115.039 162.746 1.00 4.88 O
ATOM 5 O5' C B2487 -13.401 116.133 164.823 1.00 37.36 O
ATOM 6 C5' C B2487 -13.265 116.714 166.129 1.00 37.36 C
ATOM 7 C4' C B2487 -14.104 115.952 167.121 1.00 37.36 C
ATOM 8 O4' C B2487 -15.455 115.923 166.634 1.00 37.36 O
ATOM 9 C3' C B2487 -13.728 114.488 167.294 1.00 37.36 C
ATOM 10 O3' C B2487 -12.652 114.374 168.256 1.00 37.36 O
ATOM 11 C2' C B2487 -15.050 113.767 167.605 1.00 37.36 C
ATOM 12 O2' C B2487 -15.340 113.448 168.952 1.00 37.36 O
ATOM 13 C1' C B2487 -16.093 114.771 167.120 1.00 37.36 C
ATOM 14 N1 C B2487 -17.057 114.304 166.128 1.00 11.51 N
ATOM 15 C2 C B2487 -18.406 114.349 166.467 1.00 11.51 C
ATOM 16 O2 C B2487 -18.726 114.746 167.616 1.00 11.51 O
ATOM 17 N3 C B2487 -19.330 113.959 165.554 1.00 11.51 N
ATOM 18 C4 C B2487 -18.944 113.525 164.361 1.00 11.51 C
ATOM 19 N4 C B2487 -19.890 113.143 163.506 1.00 11.51 N
ATOM 20 C5 C B2487 -17.574 113.456 163.995 1.00 11.51 C
ATOM 21 C6 C B2487 -16.669 113.850 164.902 1.00 11.51 C
ATOM 22 P U B2488 -12.946 114.435 169.856 1.00 16.18 P
ATOM 23 OP1 U B2488 -13.044 113.025 170.361 1.00 30.10 O
ATOM 24 OP2 U B2488 -14.018 115.417 170.180 1.00 30.10 O
ATOM 25 O5' U B2488 -11.605 115.027 170.454 1.00 27.62 O
TER
ATOM 2 P G A2382 -26.431 119.988 175.116 1.00 11.75 P
ATOM 3 OP1 G A2382 -24.995 119.676 175.387 1.00 18.74 O
ATOM 4 OP2 G A2382 -26.904 121.393 175.158 1.00 18.74 O
ATOM 5 O5' G A2382 -26.823 119.372 173.700 1.00 29.78 O
ATOM 6 C5' G A2382 -26.666 117.971 173.420 1.00 29.78 C
ATOM 7 C4' G A2382 -26.566 117.759 171.930 1.00 29.78 C
ATOM 8 O4' G A2382 -25.206 118.006 171.481 1.00 29.78 O
ATOM 9 C3' G A2382 -26.848 116.357 171.428 1.00 29.78 C
ATOM 10 O3' G A2382 -28.237 116.117 171.305 1.00 29.78 O
ATOM 11 C2' G A2382 -26.151 116.349 170.074 1.00 29.78 C
ATOM 12 O2' G A2382 -26.924 116.998 169.084 1.00 29.78 O
ATOM 13 C1' G A2382 -24.906 117.178 170.368 1.00 29.78 C
ATOM 14 N9 G A2382 -23.775 116.320 170.706 1.00 27.07 N
ATOM 15 C8 G A2382 -23.340 115.969 171.955 1.00 27.07 C
ATOM 16 N7 G A2382 -22.313 115.166 171.932 1.00 27.07 N
ATOM 17 C5 G A2382 -22.056 114.983 170.586 1.00 27.07 C
ATOM 18 C6 G A2382 -21.057 114.219 169.939 1.00 27.07 C
ATOM 19 O6 G A2382 -20.163 113.519 170.435 1.00 27.07 O
ATOM 20 N1 G A2382 -21.158 114.320 168.569 1.00 27.07 N
ATOM 21 C2 G A2382 -22.089 115.062 167.901 1.00 27.07 C
ATOM 22 N2 G A2382 -22.012 115.041 166.558 1.00 27.07 N
ATOM 23 N3 G A2382 -23.023 115.775 168.490 1.00 27.07 N
ATOM 24 C4 G A2382 -22.948 115.691 169.821 1.00 27.07 C
ATOM 25 P U A2383 -28.783 114.614 171.358 1.00 17.37 P
ATOM 26 OP1 U A2383 -29.929 114.634 172.306 1.00 83.89 O
ATOM 27 OP2 U A2383 -27.672 113.647 171.567 1.00 83.89 O
ATOM 28 O5' U A2383 -29.349 114.384 169.887 1.00 92.85 O
TER
ATOM 1 O3' U B2486 -11.666 117.310 163.405 1.00 37.42 O
ATOM 2 P C B2487 -12.129 115.856 163.906 1.00 43.98 P
ATOM 3 OP1 C B2487 -11.014 115.370 164.749 1.00 4.88 O
ATOM 4 OP2 C B2487 -12.569 115.039 162.746 1.00 4.88 O
ATOM 5 O5' C B2487 -13.401 116.133 164.823 1.00 37.36 O
ATOM 6 C5' C B2487 -13.265 116.714 166.129 1.00 37.36 C
ATOM 7 C4' C B2487 -14.104 115.952 167.121 1.00 37.36 C
ATOM 8 O4' C B2487 -15.455 115.923 166.634 1.00 37.36 O
ATOM 9 C3' C B2487 -13.728 114.488 167.294 1.00 37.36 C
ATOM 10 O3' C B2487 -12.652 114.374 168.256 1.00 37.36 O
ATOM 11 C2' C B2487 -15.050 113.767 167.605 1.00 37.36 C
ATOM 12 O2' C B2487 -15.340 113.448 168.952 1.00 37.36 O
ATOM 13 C1' C B2487 -16.093 114.771 167.120 1.00 37.36 C
ATOM 14 N1 C B2487 -17.057 114.304 166.128 1.00 11.51 N
ATOM 15 C2 C B2487 -18.406 114.349 166.467 1.00 11.51 C
ATOM 16 O2 C B2487 -18.726 114.746 167.616 1.00 11.51 O
ATOM 17 N3 C B2487 -19.330 113.959 165.554 1.00 11.51 N
ATOM 18 C4 C B2487 -18.944 113.525 164.361 1.00 11.51 C
ATOM 19 N4 C B2487 -19.890 113.143 163.506 1.00 11.51 N
ATOM 20 C5 C B2487 -17.574 113.456 163.995 1.00 11.51 C
ATOM 21 C6 C B2487 -16.669 113.850 164.902 1.00 11.51 C
ATOM 22 P U B2488 -12.946 114.435 169.856 1.00 16.18 P
ATOM 23 OP1 U B2488 -13.044 113.025 170.361 1.00 30.10 O
ATOM 24 OP2 U B2488 -14.018 115.417 170.180 1.00 30.10 O
ATOM 25 O5' U B2488 -11.605 115.027 170.454 1.00 27.62 O
TER
Atoms:
OP1: (-24.995,119.676,175.387)
OP2: (-26.904,121.393,175.158)
C3': (-26.848,116.357,171.428)
C1': (-24.906,117.178,170.368)
C5': (-26.666,117.971,173.420)
O6: (-20.163,113.519,170.435)
O4': (-25.206,118.006,171.481)
C8: (-23.340,115.969,171.955)
C2: (-22.089,115.062,167.901)
C6: (-21.057,114.219,169.939)
C5: (-22.056,114.983,170.586)
C4: (-22.948,115.691,169.821)
P: (-26.431,119.988,175.116)
C4': (-26.566,117.759,171.930)
C2': (-26.151,116.349,170.074)
O2': (-26.924,116.998,169.084)
N1: (-21.158,114.320,168.569)
N2: (-22.012,115.041,166.558)
N3: (-23.023,115.775,168.490)
N7: (-22.313,115.166,171.932)
N9: (-23.775,116.320,170.706)
O5': (-26.823,119.372,173.700)
O3': (-28.237,116.117,171.305)
OP2: (-26.904,121.393,175.158)
C3': (-26.848,116.357,171.428)
C1': (-24.906,117.178,170.368)
C5': (-26.666,117.971,173.420)
O6: (-20.163,113.519,170.435)
O4': (-25.206,118.006,171.481)
C8: (-23.340,115.969,171.955)
C2: (-22.089,115.062,167.901)
C6: (-21.057,114.219,169.939)
C5: (-22.056,114.983,170.586)
C4: (-22.948,115.691,169.821)
P: (-26.431,119.988,175.116)
C4': (-26.566,117.759,171.930)
C2': (-26.151,116.349,170.074)
O2': (-26.924,116.998,169.084)
N1: (-21.158,114.320,168.569)
N2: (-22.012,115.041,166.558)
N3: (-23.023,115.775,168.490)
N7: (-22.313,115.166,171.932)
N9: (-23.775,116.320,170.706)
O5': (-26.823,119.372,173.700)
O3': (-28.237,116.117,171.305)
C2: (-18.406,114.349,166.467)
OP1: (-11.014,115.370,164.749)
OP2: (-12.569,115.039,162.746)
C4: (-18.944,113.525,164.361)
O5': (-13.401,116.133,164.823)
C3': (-13.728,114.488,167.294)
C1': (-16.093,114.771,167.120)
O4': (-15.455,115.923,166.634)
C5': (-13.265,116.714,166.129)
P: (-12.129,115.856,163.906)
O2: (-18.726,114.746,167.616)
C4': (-14.104,115.952,167.121)
C2': (-15.050,113.767,167.605)
O2': (-15.340,113.448,168.952)
N1: (-17.057,114.304,166.128)
N3: (-19.330,113.959,165.554)
N4: (-19.890,113.143,163.506)
C6: (-16.669,113.850,164.902)
C5: (-17.574,113.456,163.995)
O3': (-12.652,114.374,168.256)
OP1: (-11.014,115.370,164.749)
OP2: (-12.569,115.039,162.746)
C4: (-18.944,113.525,164.361)
O5': (-13.401,116.133,164.823)
C3': (-13.728,114.488,167.294)
C1': (-16.093,114.771,167.120)
O4': (-15.455,115.923,166.634)
C5': (-13.265,116.714,166.129)
P: (-12.129,115.856,163.906)
O2: (-18.726,114.746,167.616)
C4': (-14.104,115.952,167.121)
C2': (-15.050,113.767,167.605)
O2': (-15.340,113.448,168.952)
N1: (-17.057,114.304,166.128)
N3: (-19.330,113.959,165.554)
N4: (-19.890,113.143,163.506)
C6: (-16.669,113.850,164.902)
C5: (-17.574,113.456,163.995)
O3': (-12.652,114.374,168.256)
Image (generated by PyMOL):