ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:Z14:Z48

Extra

PDB:
ATOM 1 O3' A A 13 -108.307 10.161 52.608 1.00274.90 O
ATOM 2 P G A 14 -108.464 9.383 54.004 1.00263.28 P
ATOM 3 OP1 G A 14 -107.377 9.827 54.904 1.00239.89 O
ATOM 4 OP2 G A 14 -108.612 7.941 53.705 1.00221.99 O
ATOM 5 O5' G A 14 -109.851 9.945 54.584 1.00229.17 O
ATOM 6 C5' G A 14 -109.984 11.315 54.964 1.00218.24 C
ATOM 7 C4' G A 14 -111.433 11.725 55.196 1.00227.79 C
ATOM 8 O4' G A 14 -112.240 11.476 54.013 1.00221.22 O
ATOM 9 C3' G A 14 -112.200 10.985 56.284 1.00230.93 C
ATOM 10 O3' G A 14 -111.822 11.413 57.592 1.00239.74 O
ATOM 11 C2' G A 14 -113.605 11.453 55.928 1.00224.96 C
ATOM 12 O2' G A 14 -113.805 12.819 56.227 1.00218.49 O
ATOM 13 C1' G A 14 -113.584 11.263 54.416 1.00225.61 C
ATOM 14 N9 G A 14 -114.030 9.927 54.027 1.00225.12 N
ATOM 15 C8 G A 14 -113.250 8.853 53.674 1.00219.40 C
ATOM 16 N7 G A 14 -113.938 7.783 53.381 1.00218.04 N
ATOM 17 C5 G A 14 -115.262 8.168 53.554 1.00226.38 C
ATOM 18 C6 G A 14 -116.462 7.433 53.384 1.00225.11 C
ATOM 19 O6 G A 14 -116.604 6.252 53.035 1.00220.31 O
ATOM 20 N1 G A 14 -117.585 8.209 53.664 1.00228.91 N
ATOM 21 C2 G A 14 -117.555 9.525 54.059 1.00227.75 C
ATOM 22 N2 G A 14 -118.742 10.107 54.286 1.00218.77 N
ATOM 23 N3 G A 14 -116.438 10.224 54.222 1.00220.11 N
ATOM 24 C4 G A 14 -115.333 9.485 53.953 1.00225.36 C
ATOM 25 P C A 15 -111.615 10.365 58.793 1.00279.72 P
ATOM 26 OP1 C A 15 -111.668 11.133 60.059 1.00240.63 O
ATOM 27 OP2 C A 15 -110.427 9.534 58.483 1.00223.90 O
ATOM 28 O5' C A 15 -112.924 9.442 58.739 1.00247.33 O
TER

ATOM 1 O3' U B 47 -126.740 4.157 55.328 1.00256.56 O
ATOM 2 P C B 48 -125.167 4.416 55.157 1.00282.69 P
ATOM 3 OP1 C B 48 -124.460 3.163 55.498 1.00255.50 O
ATOM 4 OP2 C B 48 -124.842 5.656 55.895 1.00249.67 O
ATOM 5 O5' C B 48 -124.992 4.711 53.593 1.00266.08 O
ATOM 6 C5' C B 48 -124.605 3.682 52.682 1.00256.75 C
ATOM 7 C4' C B 48 -123.210 3.936 52.138 1.00261.35 C
ATOM 8 O4' C B 48 -123.016 5.362 51.972 1.00255.86 O
ATOM 9 C3' C B 48 -122.080 3.411 53.017 1.00258.59 C
ATOM 10 O3' C B 48 -121.394 2.378 52.313 1.00274.23 O
ATOM 11 C2' C B 48 -121.168 4.606 53.300 1.00256.87 C
ATOM 12 O2' C B 48 -119.864 4.421 52.777 1.00249.03 O
ATOM 13 C1' C B 48 -121.841 5.803 52.623 1.00258.95 C
ATOM 14 N1 C B 48 -122.206 6.921 53.560 1.00253.83 N
ATOM 15 C2 C B 48 -121.200 7.628 54.232 1.00248.12 C
ATOM 16 O2 C B 48 -120.016 7.320 54.053 1.00241.95 O
ATOM 17 N3 C B 48 -121.553 8.635 55.069 1.00250.35 N
ATOM 18 C4 C B 48 -122.839 8.943 55.244 1.00260.57 C
ATOM 19 N4 C B 48 -123.135 9.943 56.080 1.00259.10 N
ATOM 20 C5 C B 48 -123.877 8.238 54.567 1.00252.80 C
ATOM 21 C6 C B 48 -123.519 7.247 53.744 1.00242.09 C
ATOM 22 P G B 49 -120.707 1.173 53.110 1.00297.35 P
ATOM 23 OP1 G B 49 -120.828 1.459 54.558 1.00246.58 O
ATOM 24 OP2 G B 49 -119.377 0.922 52.513 1.00264.23 O
ATOM 25 O5' G B 49 -121.666 -0.063 52.775 1.00249.39 O
TER

Atoms:
OP1: (-107.377,9.827,54.904)
OP2: (-108.612,7.941,53.705)
C3': (-112.200,10.985,56.284)
C1': (-113.584,11.263,54.416)
C5': (-109.984,11.315,54.964)
O6: (-116.604,6.252,53.035)
O4': (-112.240,11.476,54.013)
C8: (-113.250,8.853,53.674)
C2: (-117.555,9.525,54.059)
C6: (-116.462,7.433,53.384)
C5: (-115.262,8.168,53.554)
C4: (-115.333,9.485,53.953)
P: (-108.464,9.383,54.004)
C4': (-111.433,11.725,55.196)
C2': (-113.605,11.453,55.928)
O2': (-113.805,12.819,56.227)
N1: (-117.585,8.209,53.664)
N2: (-118.742,10.107,54.286)
N3: (-116.438,10.224,54.222)
N7: (-113.938,7.783,53.381)
N9: (-114.030,9.927,54.027)
O5': (-109.851,9.945,54.584)
O3': (-111.822,11.413,57.592)
C2: (-121.200,7.628,54.232)
OP1: (-124.460,3.163,55.498)
OP2: (-124.842,5.656,55.895)
C4: (-122.839,8.943,55.244)
O5': (-124.992,4.711,53.593)
C3': (-122.080,3.411,53.017)
C1': (-121.841,5.803,52.623)
O4': (-123.016,5.362,51.972)
C5': (-124.605,3.682,52.682)
P: (-125.167,4.416,55.157)
O2: (-120.016,7.320,54.053)
C4': (-123.210,3.936,52.138)
C2': (-121.168,4.606,53.300)
O2': (-119.864,4.421,52.777)
N1: (-122.206,6.921,53.560)
N3: (-121.553,8.635,55.069)
N4: (-123.135,9.943,56.080)
C6: (-123.519,7.247,53.744)
C5: (-123.877,8.238,54.567)
O3': (-121.394,2.378,52.313)
Image (generated by PyMOL):
PyMOL image
show in jmol