Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1741:A1724
Extra
PDB:
ATOM 1 O3' G A1740 45.107 -10.327 -38.284 1.00 60.55 O
ATOM 2 P G A1741 44.833 -8.850 -37.701 1.00 56.48 P
ATOM 3 OP1 G A1741 43.557 -8.816 -36.935 1.00 54.72 O
ATOM 4 OP2 G A1741 45.024 -7.940 -38.861 1.00 55.27 O
ATOM 5 O5' G A1741 46.022 -8.554 -36.682 1.00 51.60 O
ATOM 6 C5' G A1741 45.957 -8.955 -35.318 1.00 45.15 C
ATOM 7 C4' G A1741 47.348 -9.106 -34.773 1.00 48.57 C
ATOM 8 O4' G A1741 48.014 -10.147 -35.543 1.00 44.54 O
ATOM 9 C3' G A1741 48.233 -7.883 -34.963 1.00 46.20 C
ATOM 10 O3' G A1741 48.069 -6.952 -33.906 1.00 36.61 O
ATOM 11 C2' G A1741 49.626 -8.498 -35.020 1.00 49.00 C
ATOM 12 O2' G A1741 50.076 -8.868 -33.737 1.00 53.77 O
ATOM 13 C1' G A1741 49.360 -9.784 -35.798 1.00 45.23 C
ATOM 14 N9 G A1741 49.543 -9.643 -37.243 1.00 49.05 N
ATOM 15 C8 G A1741 48.566 -9.673 -38.211 1.00 53.49 C
ATOM 16 N7 G A1741 49.038 -9.552 -39.423 1.00 53.67 N
ATOM 17 C5 G A1741 50.405 -9.433 -39.251 1.00 49.96 C
ATOM 18 C6 G A1741 51.443 -9.285 -40.209 1.00 53.27 C
ATOM 19 O6 G A1741 51.351 -9.244 -41.450 1.00 54.73 O
ATOM 20 N1 G A1741 52.687 -9.175 -39.598 1.00 50.67 N
ATOM 21 C2 G A1741 52.903 -9.201 -38.242 1.00 47.99 C
ATOM 22 N2 G A1741 54.165 -9.050 -37.843 1.00 51.57 N
ATOM 23 N3 G A1741 51.951 -9.356 -37.341 1.00 45.31 N
ATOM 24 C4 G A1741 50.735 -9.465 -37.910 1.00 48.86 C
ATOM 25 P U A1742 48.322 -5.385 -34.194 1.00 47.98 P
ATOM 26 OP1 U A1742 48.557 -4.688 -32.898 1.00 43.56 O
ATOM 27 OP2 U A1742 47.226 -4.942 -35.096 1.00 44.38 O
ATOM 28 O5' U A1742 49.688 -5.314 -34.982 1.00 46.95 O
TER
ATOM 1 O3' G B1723 60.680 -3.310 -44.231 1.00 43.63 O
ATOM 2 P C B1724 59.621 -3.715 -45.391 1.00 41.50 P
ATOM 3 OP1 C B1724 60.238 -4.848 -46.104 1.00 51.25 O
ATOM 4 OP2 C B1724 59.220 -2.524 -46.167 1.00 43.89 O
ATOM 5 O5' C B1724 58.373 -4.326 -44.614 1.00 47.97 O
ATOM 6 C5' C B1724 57.076 -4.329 -45.189 1.00 49.49 C
ATOM 7 C4' C B1724 56.441 -5.690 -45.052 1.00 48.67 C
ATOM 8 O4' C B1724 56.721 -6.241 -43.737 1.00 42.83 O
ATOM 9 C3' C B1724 54.924 -5.708 -45.214 1.00 49.69 C
ATOM 10 O3' C B1724 54.574 -6.915 -45.892 1.00 54.40 O
ATOM 11 C2' C B1724 54.431 -5.730 -43.762 1.00 48.46 C
ATOM 12 O2' C B1724 53.181 -6.355 -43.586 1.00 54.21 O
ATOM 13 C1' C B1724 55.512 -6.568 -43.092 1.00 44.83 C
ATOM 14 N1 C B1724 55.676 -6.420 -41.624 1.00 47.31 N
ATOM 15 C2 C B1724 55.281 -7.496 -40.796 1.00 47.57 C
ATOM 16 O2 C B1724 54.751 -8.493 -41.309 1.00 49.80 O
ATOM 17 N3 C B1724 55.470 -7.418 -39.463 1.00 41.84 N
ATOM 18 C4 C B1724 55.985 -6.312 -38.930 1.00 43.68 C
ATOM 19 N4 C B1724 56.115 -6.272 -37.596 1.00 41.00 N
ATOM 20 C5 C B1724 56.379 -5.192 -39.733 1.00 47.48 C
ATOM 21 C6 C B1724 56.209 -5.289 -41.065 1.00 46.83 C
ATOM 22 P G B1725 53.475 -6.882 -47.059 1.00 53.10 P
ATOM 23 OP1 G B1725 53.885 -5.799 -47.968 1.00 52.66 O
ATOM 24 OP2 G B1725 52.124 -6.880 -46.445 1.00 49.00 O
ATOM 25 O5' G B1725 53.630 -8.258 -47.830 1.00 51.35 O
TER
ATOM 2 P G A1741 44.833 -8.850 -37.701 1.00 56.48 P
ATOM 3 OP1 G A1741 43.557 -8.816 -36.935 1.00 54.72 O
ATOM 4 OP2 G A1741 45.024 -7.940 -38.861 1.00 55.27 O
ATOM 5 O5' G A1741 46.022 -8.554 -36.682 1.00 51.60 O
ATOM 6 C5' G A1741 45.957 -8.955 -35.318 1.00 45.15 C
ATOM 7 C4' G A1741 47.348 -9.106 -34.773 1.00 48.57 C
ATOM 8 O4' G A1741 48.014 -10.147 -35.543 1.00 44.54 O
ATOM 9 C3' G A1741 48.233 -7.883 -34.963 1.00 46.20 C
ATOM 10 O3' G A1741 48.069 -6.952 -33.906 1.00 36.61 O
ATOM 11 C2' G A1741 49.626 -8.498 -35.020 1.00 49.00 C
ATOM 12 O2' G A1741 50.076 -8.868 -33.737 1.00 53.77 O
ATOM 13 C1' G A1741 49.360 -9.784 -35.798 1.00 45.23 C
ATOM 14 N9 G A1741 49.543 -9.643 -37.243 1.00 49.05 N
ATOM 15 C8 G A1741 48.566 -9.673 -38.211 1.00 53.49 C
ATOM 16 N7 G A1741 49.038 -9.552 -39.423 1.00 53.67 N
ATOM 17 C5 G A1741 50.405 -9.433 -39.251 1.00 49.96 C
ATOM 18 C6 G A1741 51.443 -9.285 -40.209 1.00 53.27 C
ATOM 19 O6 G A1741 51.351 -9.244 -41.450 1.00 54.73 O
ATOM 20 N1 G A1741 52.687 -9.175 -39.598 1.00 50.67 N
ATOM 21 C2 G A1741 52.903 -9.201 -38.242 1.00 47.99 C
ATOM 22 N2 G A1741 54.165 -9.050 -37.843 1.00 51.57 N
ATOM 23 N3 G A1741 51.951 -9.356 -37.341 1.00 45.31 N
ATOM 24 C4 G A1741 50.735 -9.465 -37.910 1.00 48.86 C
ATOM 25 P U A1742 48.322 -5.385 -34.194 1.00 47.98 P
ATOM 26 OP1 U A1742 48.557 -4.688 -32.898 1.00 43.56 O
ATOM 27 OP2 U A1742 47.226 -4.942 -35.096 1.00 44.38 O
ATOM 28 O5' U A1742 49.688 -5.314 -34.982 1.00 46.95 O
TER
ATOM 1 O3' G B1723 60.680 -3.310 -44.231 1.00 43.63 O
ATOM 2 P C B1724 59.621 -3.715 -45.391 1.00 41.50 P
ATOM 3 OP1 C B1724 60.238 -4.848 -46.104 1.00 51.25 O
ATOM 4 OP2 C B1724 59.220 -2.524 -46.167 1.00 43.89 O
ATOM 5 O5' C B1724 58.373 -4.326 -44.614 1.00 47.97 O
ATOM 6 C5' C B1724 57.076 -4.329 -45.189 1.00 49.49 C
ATOM 7 C4' C B1724 56.441 -5.690 -45.052 1.00 48.67 C
ATOM 8 O4' C B1724 56.721 -6.241 -43.737 1.00 42.83 O
ATOM 9 C3' C B1724 54.924 -5.708 -45.214 1.00 49.69 C
ATOM 10 O3' C B1724 54.574 -6.915 -45.892 1.00 54.40 O
ATOM 11 C2' C B1724 54.431 -5.730 -43.762 1.00 48.46 C
ATOM 12 O2' C B1724 53.181 -6.355 -43.586 1.00 54.21 O
ATOM 13 C1' C B1724 55.512 -6.568 -43.092 1.00 44.83 C
ATOM 14 N1 C B1724 55.676 -6.420 -41.624 1.00 47.31 N
ATOM 15 C2 C B1724 55.281 -7.496 -40.796 1.00 47.57 C
ATOM 16 O2 C B1724 54.751 -8.493 -41.309 1.00 49.80 O
ATOM 17 N3 C B1724 55.470 -7.418 -39.463 1.00 41.84 N
ATOM 18 C4 C B1724 55.985 -6.312 -38.930 1.00 43.68 C
ATOM 19 N4 C B1724 56.115 -6.272 -37.596 1.00 41.00 N
ATOM 20 C5 C B1724 56.379 -5.192 -39.733 1.00 47.48 C
ATOM 21 C6 C B1724 56.209 -5.289 -41.065 1.00 46.83 C
ATOM 22 P G B1725 53.475 -6.882 -47.059 1.00 53.10 P
ATOM 23 OP1 G B1725 53.885 -5.799 -47.968 1.00 52.66 O
ATOM 24 OP2 G B1725 52.124 -6.880 -46.445 1.00 49.00 O
ATOM 25 O5' G B1725 53.630 -8.258 -47.830 1.00 51.35 O
TER
Atoms:
OP1: (43.557,-8.816,-36.935)
OP2: (45.024,-7.940,-38.861)
C3': (48.233,-7.883,-34.963)
C1': (49.360,-9.784,-35.798)
C5': (45.957,-8.955,-35.318)
O6: (51.351,-9.244,-41.450)
O4': (48.014,-10.147,-35.543)
C8: (48.566,-9.673,-38.211)
C2: (52.903,-9.201,-38.242)
C6: (51.443,-9.285,-40.209)
C5: (50.405,-9.433,-39.251)
C4: (50.735,-9.465,-37.910)
P: (44.833,-8.850,-37.701)
C4': (47.348,-9.106,-34.773)
C2': (49.626,-8.498,-35.020)
O2': (50.076,-8.868,-33.737)
N1: (52.687,-9.175,-39.598)
N2: (54.165,-9.050,-37.843)
N3: (51.951,-9.356,-37.341)
N7: (49.038,-9.552,-39.423)
N9: (49.543,-9.643,-37.243)
O5': (46.022,-8.554,-36.682)
O3': (48.069,-6.952,-33.906)
OP2: (45.024,-7.940,-38.861)
C3': (48.233,-7.883,-34.963)
C1': (49.360,-9.784,-35.798)
C5': (45.957,-8.955,-35.318)
O6: (51.351,-9.244,-41.450)
O4': (48.014,-10.147,-35.543)
C8: (48.566,-9.673,-38.211)
C2: (52.903,-9.201,-38.242)
C6: (51.443,-9.285,-40.209)
C5: (50.405,-9.433,-39.251)
C4: (50.735,-9.465,-37.910)
P: (44.833,-8.850,-37.701)
C4': (47.348,-9.106,-34.773)
C2': (49.626,-8.498,-35.020)
O2': (50.076,-8.868,-33.737)
N1: (52.687,-9.175,-39.598)
N2: (54.165,-9.050,-37.843)
N3: (51.951,-9.356,-37.341)
N7: (49.038,-9.552,-39.423)
N9: (49.543,-9.643,-37.243)
O5': (46.022,-8.554,-36.682)
O3': (48.069,-6.952,-33.906)
C2: (55.281,-7.496,-40.796)
OP1: (60.238,-4.848,-46.104)
OP2: (59.220,-2.524,-46.167)
C4: (55.985,-6.312,-38.930)
O5': (58.373,-4.326,-44.614)
C3': (54.924,-5.708,-45.214)
C1': (55.512,-6.568,-43.092)
O4': (56.721,-6.241,-43.737)
C5': (57.076,-4.329,-45.189)
P: (59.621,-3.715,-45.391)
O2: (54.751,-8.493,-41.309)
C4': (56.441,-5.690,-45.052)
C2': (54.431,-5.730,-43.762)
O2': (53.181,-6.355,-43.586)
N1: (55.676,-6.420,-41.624)
N3: (55.470,-7.418,-39.463)
N4: (56.115,-6.272,-37.596)
C6: (56.209,-5.289,-41.065)
C5: (56.379,-5.192,-39.733)
O3': (54.574,-6.915,-45.892)
OP1: (60.238,-4.848,-46.104)
OP2: (59.220,-2.524,-46.167)
C4: (55.985,-6.312,-38.930)
O5': (58.373,-4.326,-44.614)
C3': (54.924,-5.708,-45.214)
C1': (55.512,-6.568,-43.092)
O4': (56.721,-6.241,-43.737)
C5': (57.076,-4.329,-45.189)
P: (59.621,-3.715,-45.391)
O2: (54.751,-8.493,-41.309)
C4': (56.441,-5.690,-45.052)
C2': (54.431,-5.730,-43.762)
O2': (53.181,-6.355,-43.586)
N1: (55.676,-6.420,-41.624)
N3: (55.470,-7.418,-39.463)
N4: (56.115,-6.272,-37.596)
C6: (56.209,-5.289,-41.065)
C5: (56.379,-5.192,-39.733)
O3': (54.574,-6.915,-45.892)
Image (generated by PyMOL):