Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2335:A2440
Extra
PDB:
ATOM 1 O3' U A2334 81.893 -63.355 -4.055 1.00 35.55 O
ATOM 2 P G A2335 81.063 -62.237 -4.821 1.00 22.19 P
ATOM 3 OP1 G A2335 79.635 -62.387 -4.423 1.00 42.86 O
ATOM 4 OP2 G A2335 81.405 -62.358 -6.221 1.00 26.43 O
ATOM 5 O5' G A2335 81.654 -60.908 -4.211 1.00 25.37 O
ATOM 6 C5' G A2335 81.713 -60.729 -2.802 1.00 23.38 C
ATOM 7 C4' G A2335 81.661 -59.274 -2.452 1.00 28.52 C
ATOM 8 O4' G A2335 80.367 -58.729 -2.786 1.00 30.46 O
ATOM 9 C3' G A2335 81.836 -58.911 -0.999 1.00 34.96 C
ATOM 10 O3' G A2335 83.182 -58.932 -0.603 1.00 30.87 O
ATOM 11 C2' G A2335 81.246 -57.528 -0.969 1.00 28.53 C
ATOM 12 O2' G A2335 82.132 -56.631 -1.592 1.00 30.87 O
ATOM 13 C1' G A2335 80.039 -57.711 -1.878 1.00 28.75 C
ATOM 14 N9 G A2335 78.844 -58.129 -1.124 1.00 29.07 N
ATOM 15 C8 G A2335 78.512 -59.392 -0.760 1.00 29.01 C
ATOM 16 N7 G A2335 77.393 -59.464 -0.101 1.00 31.91 N
ATOM 17 C5 G A2335 76.949 -58.159 -0.016 1.00 28.19 C
ATOM 18 C6 G A2335 75.792 -57.630 0.598 1.00 28.53 C
ATOM 19 O6 G A2335 74.876 -58.204 1.211 1.00 31.08 O
ATOM 20 N1 G A2335 75.783 -56.261 0.429 1.00 30.93 N
ATOM 21 C2 G A2335 76.724 -55.524 -0.241 1.00 30.35 C
ATOM 22 N2 G A2335 76.509 -54.208 -0.305 1.00 37.75 N
ATOM 23 N3 G A2335 77.794 -56.004 -0.809 1.00 28.98 N
ATOM 24 C4 G A2335 77.838 -57.324 -0.652 1.00 29.34 C
ATOM 25 P U A2336 83.579 -58.619 0.913 1.00 38.91 P
ATOM 26 OP1 U A2336 84.902 -59.287 1.143 1.00 49.42 O
ATOM 27 OP2 U A2336 82.422 -58.995 1.767 1.00 31.00 O
ATOM 28 O5' U A2336 83.759 -57.044 0.907 1.00 36.91 O
TER
ATOM 1 O3' U B2439 66.293 -51.130 -2.549 1.00 32.97 O
ATOM 2 P C B2440 66.635 -51.686 -1.086 1.00 26.51 P
ATOM 3 OP1 C B2440 65.495 -52.515 -0.658 1.00 28.02 O
ATOM 4 OP2 C B2440 67.011 -50.537 -0.241 1.00 27.38 O
ATOM 5 O5' C B2440 67.893 -52.589 -1.352 1.00 33.73 O
ATOM 6 C5' C B2440 67.737 -53.920 -1.783 1.00 32.98 C
ATOM 7 C4' C B2440 68.430 -54.868 -0.860 1.00 24.07 C
ATOM 8 O4' C B2440 69.817 -54.521 -0.856 1.00 19.49 O
ATOM 9 C3' C B2440 67.964 -54.817 0.596 1.00 35.82 C
ATOM 10 O3' C B2440 67.279 -56.030 1.010 1.00 48.15 O
ATOM 11 C2' C B2440 69.240 -54.625 1.424 1.00 28.87 C
ATOM 12 O2' C B2440 69.402 -55.581 2.460 1.00 32.74 O
ATOM 13 C1' C B2440 70.370 -54.735 0.406 1.00 27.84 C
ATOM 14 N1 C B2440 71.439 -53.735 0.619 1.00 36.18 N
ATOM 15 C2 C B2440 72.807 -54.058 0.676 1.00 31.56 C
ATOM 16 O2 C B2440 73.180 -55.234 0.501 1.00 31.45 O
ATOM 17 N3 C B2440 73.675 -53.065 0.919 1.00 20.67 N
ATOM 18 C4 C B2440 73.250 -51.827 1.114 1.00 25.94 C
ATOM 19 N4 C B2440 74.146 -50.871 1.344 1.00 29.57 N
ATOM 20 C5 C B2440 71.876 -51.488 1.072 1.00 35.39 C
ATOM 21 C6 C B2440 71.012 -52.471 0.830 1.00 33.09 C
ATOM 22 P U B2441 67.438 -57.446 0.244 1.00 21.81 P
ATOM 23 OP1 U B2441 67.716 -58.467 1.279 1.00 37.27 O
ATOM 24 OP2 U B2441 68.390 -57.278 -0.835 1.00 37.49 O
ATOM 25 O5' U B2441 66.005 -57.669 -0.371 1.00 42.04 O
TER
ATOM 2 P G A2335 81.063 -62.237 -4.821 1.00 22.19 P
ATOM 3 OP1 G A2335 79.635 -62.387 -4.423 1.00 42.86 O
ATOM 4 OP2 G A2335 81.405 -62.358 -6.221 1.00 26.43 O
ATOM 5 O5' G A2335 81.654 -60.908 -4.211 1.00 25.37 O
ATOM 6 C5' G A2335 81.713 -60.729 -2.802 1.00 23.38 C
ATOM 7 C4' G A2335 81.661 -59.274 -2.452 1.00 28.52 C
ATOM 8 O4' G A2335 80.367 -58.729 -2.786 1.00 30.46 O
ATOM 9 C3' G A2335 81.836 -58.911 -0.999 1.00 34.96 C
ATOM 10 O3' G A2335 83.182 -58.932 -0.603 1.00 30.87 O
ATOM 11 C2' G A2335 81.246 -57.528 -0.969 1.00 28.53 C
ATOM 12 O2' G A2335 82.132 -56.631 -1.592 1.00 30.87 O
ATOM 13 C1' G A2335 80.039 -57.711 -1.878 1.00 28.75 C
ATOM 14 N9 G A2335 78.844 -58.129 -1.124 1.00 29.07 N
ATOM 15 C8 G A2335 78.512 -59.392 -0.760 1.00 29.01 C
ATOM 16 N7 G A2335 77.393 -59.464 -0.101 1.00 31.91 N
ATOM 17 C5 G A2335 76.949 -58.159 -0.016 1.00 28.19 C
ATOM 18 C6 G A2335 75.792 -57.630 0.598 1.00 28.53 C
ATOM 19 O6 G A2335 74.876 -58.204 1.211 1.00 31.08 O
ATOM 20 N1 G A2335 75.783 -56.261 0.429 1.00 30.93 N
ATOM 21 C2 G A2335 76.724 -55.524 -0.241 1.00 30.35 C
ATOM 22 N2 G A2335 76.509 -54.208 -0.305 1.00 37.75 N
ATOM 23 N3 G A2335 77.794 -56.004 -0.809 1.00 28.98 N
ATOM 24 C4 G A2335 77.838 -57.324 -0.652 1.00 29.34 C
ATOM 25 P U A2336 83.579 -58.619 0.913 1.00 38.91 P
ATOM 26 OP1 U A2336 84.902 -59.287 1.143 1.00 49.42 O
ATOM 27 OP2 U A2336 82.422 -58.995 1.767 1.00 31.00 O
ATOM 28 O5' U A2336 83.759 -57.044 0.907 1.00 36.91 O
TER
ATOM 1 O3' U B2439 66.293 -51.130 -2.549 1.00 32.97 O
ATOM 2 P C B2440 66.635 -51.686 -1.086 1.00 26.51 P
ATOM 3 OP1 C B2440 65.495 -52.515 -0.658 1.00 28.02 O
ATOM 4 OP2 C B2440 67.011 -50.537 -0.241 1.00 27.38 O
ATOM 5 O5' C B2440 67.893 -52.589 -1.352 1.00 33.73 O
ATOM 6 C5' C B2440 67.737 -53.920 -1.783 1.00 32.98 C
ATOM 7 C4' C B2440 68.430 -54.868 -0.860 1.00 24.07 C
ATOM 8 O4' C B2440 69.817 -54.521 -0.856 1.00 19.49 O
ATOM 9 C3' C B2440 67.964 -54.817 0.596 1.00 35.82 C
ATOM 10 O3' C B2440 67.279 -56.030 1.010 1.00 48.15 O
ATOM 11 C2' C B2440 69.240 -54.625 1.424 1.00 28.87 C
ATOM 12 O2' C B2440 69.402 -55.581 2.460 1.00 32.74 O
ATOM 13 C1' C B2440 70.370 -54.735 0.406 1.00 27.84 C
ATOM 14 N1 C B2440 71.439 -53.735 0.619 1.00 36.18 N
ATOM 15 C2 C B2440 72.807 -54.058 0.676 1.00 31.56 C
ATOM 16 O2 C B2440 73.180 -55.234 0.501 1.00 31.45 O
ATOM 17 N3 C B2440 73.675 -53.065 0.919 1.00 20.67 N
ATOM 18 C4 C B2440 73.250 -51.827 1.114 1.00 25.94 C
ATOM 19 N4 C B2440 74.146 -50.871 1.344 1.00 29.57 N
ATOM 20 C5 C B2440 71.876 -51.488 1.072 1.00 35.39 C
ATOM 21 C6 C B2440 71.012 -52.471 0.830 1.00 33.09 C
ATOM 22 P U B2441 67.438 -57.446 0.244 1.00 21.81 P
ATOM 23 OP1 U B2441 67.716 -58.467 1.279 1.00 37.27 O
ATOM 24 OP2 U B2441 68.390 -57.278 -0.835 1.00 37.49 O
ATOM 25 O5' U B2441 66.005 -57.669 -0.371 1.00 42.04 O
TER
Atoms:
OP1: (79.635,-62.387,-4.423)
OP2: (81.405,-62.358,-6.221)
C3': (81.836,-58.911,-0.999)
C1': (80.039,-57.711,-1.878)
C5': (81.713,-60.729,-2.802)
O6: (74.876,-58.204,1.211)
O4': (80.367,-58.729,-2.786)
C8: (78.512,-59.392,-0.760)
C2: (76.724,-55.524,-0.241)
C6: (75.792,-57.630,0.598)
C5: (76.949,-58.159,-0.016)
C4: (77.838,-57.324,-0.652)
P: (81.063,-62.237,-4.821)
C4': (81.661,-59.274,-2.452)
C2': (81.246,-57.528,-0.969)
O2': (82.132,-56.631,-1.592)
N1: (75.783,-56.261,0.429)
N2: (76.509,-54.208,-0.305)
N3: (77.794,-56.004,-0.809)
N7: (77.393,-59.464,-0.101)
N9: (78.844,-58.129,-1.124)
O5': (81.654,-60.908,-4.211)
O3': (83.182,-58.932,-0.603)
OP2: (81.405,-62.358,-6.221)
C3': (81.836,-58.911,-0.999)
C1': (80.039,-57.711,-1.878)
C5': (81.713,-60.729,-2.802)
O6: (74.876,-58.204,1.211)
O4': (80.367,-58.729,-2.786)
C8: (78.512,-59.392,-0.760)
C2: (76.724,-55.524,-0.241)
C6: (75.792,-57.630,0.598)
C5: (76.949,-58.159,-0.016)
C4: (77.838,-57.324,-0.652)
P: (81.063,-62.237,-4.821)
C4': (81.661,-59.274,-2.452)
C2': (81.246,-57.528,-0.969)
O2': (82.132,-56.631,-1.592)
N1: (75.783,-56.261,0.429)
N2: (76.509,-54.208,-0.305)
N3: (77.794,-56.004,-0.809)
N7: (77.393,-59.464,-0.101)
N9: (78.844,-58.129,-1.124)
O5': (81.654,-60.908,-4.211)
O3': (83.182,-58.932,-0.603)
C2: (72.807,-54.058,0.676)
OP1: (65.495,-52.515,-0.658)
OP2: (67.011,-50.537,-0.241)
C4: (73.250,-51.827,1.114)
O5': (67.893,-52.589,-1.352)
C3': (67.964,-54.817,0.596)
C1': (70.370,-54.735,0.406)
O4': (69.817,-54.521,-0.856)
C5': (67.737,-53.920,-1.783)
P: (66.635,-51.686,-1.086)
O2: (73.180,-55.234,0.501)
C4': (68.430,-54.868,-0.860)
C2': (69.240,-54.625,1.424)
O2': (69.402,-55.581,2.460)
N1: (71.439,-53.735,0.619)
N3: (73.675,-53.065,0.919)
N4: (74.146,-50.871,1.344)
C6: (71.012,-52.471,0.830)
C5: (71.876,-51.488,1.072)
O3': (67.279,-56.030,1.010)
OP1: (65.495,-52.515,-0.658)
OP2: (67.011,-50.537,-0.241)
C4: (73.250,-51.827,1.114)
O5': (67.893,-52.589,-1.352)
C3': (67.964,-54.817,0.596)
C1': (70.370,-54.735,0.406)
O4': (69.817,-54.521,-0.856)
C5': (67.737,-53.920,-1.783)
P: (66.635,-51.686,-1.086)
O2: (73.180,-55.234,0.501)
C4': (68.430,-54.868,-0.860)
C2': (69.240,-54.625,1.424)
O2': (69.402,-55.581,2.460)
N1: (71.439,-53.735,0.619)
N3: (73.675,-53.065,0.919)
N4: (74.146,-50.871,1.344)
C6: (71.012,-52.471,0.830)
C5: (71.876,-51.488,1.072)
O3': (67.279,-56.030,1.010)
Image (generated by PyMOL):