Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2335:A2440
Extra
PDB:
ATOM 1 O3' U A2334 82.239 -63.461 -4.093 1.00 28.48 O
ATOM 2 P G A2335 81.336 -62.443 -4.937 1.00 33.77 P
ATOM 3 OP1 G A2335 79.920 -62.772 -4.653 1.00 38.13 O
ATOM 4 OP2 G A2335 81.802 -62.505 -6.328 1.00 32.41 O
ATOM 5 O5' G A2335 81.709 -61.039 -4.306 1.00 21.85 O
ATOM 6 C5' G A2335 81.539 -60.784 -2.931 1.00 18.30 C
ATOM 7 C4' G A2335 81.554 -59.310 -2.679 1.00 22.94 C
ATOM 8 O4' G A2335 80.262 -58.749 -2.965 1.00 31.36 O
ATOM 9 C3' G A2335 81.818 -58.880 -1.271 1.00 39.39 C
ATOM 10 O3' G A2335 83.184 -58.945 -0.940 1.00 58.49 O
ATOM 11 C2' G A2335 81.243 -57.472 -1.271 1.00 33.96 C
ATOM 12 O2' G A2335 82.062 -56.601 -2.007 1.00 44.04 O
ATOM 13 C1' G A2335 79.987 -57.694 -2.073 1.00 31.90 C
ATOM 14 N9 G A2335 78.844 -58.077 -1.208 1.00 30.33 N
ATOM 15 C8 G A2335 78.556 -59.328 -0.768 1.00 29.66 C
ATOM 16 N7 G A2335 77.519 -59.368 -0.004 1.00 33.64 N
ATOM 17 C5 G A2335 77.090 -58.064 0.083 1.00 26.12 C
ATOM 18 C6 G A2335 75.995 -57.527 0.790 1.00 28.61 C
ATOM 19 O6 G A2335 75.141 -58.098 1.500 1.00 33.34 O
ATOM 20 N1 G A2335 75.957 -56.170 0.608 1.00 22.19 N
ATOM 21 C2 G A2335 76.804 -55.450 -0.163 1.00 21.92 C
ATOM 22 N2 G A2335 76.570 -54.139 -0.226 1.00 28.73 N
ATOM 23 N3 G A2335 77.799 -55.938 -0.818 1.00 21.89 N
ATOM 24 C4 G A2335 77.891 -57.253 -0.649 1.00 24.74 C
ATOM 25 P U A2336 83.698 -58.502 0.512 1.00 44.01 P
ATOM 26 OP1 U A2336 85.165 -58.735 0.532 1.00 85.40 O
ATOM 27 OP2 U A2336 82.854 -59.184 1.525 1.00 46.82 O
ATOM 28 O5' U A2336 83.407 -56.953 0.503 1.00 76.25 O
TER
ATOM 1 O3' U B2439 66.425 -50.888 -2.487 1.00 32.03 O
ATOM 2 P C B2440 66.691 -51.421 -0.988 1.00 37.09 P
ATOM 3 OP1 C B2440 65.577 -52.346 -0.646 1.00 32.04 O
ATOM 4 OP2 C B2440 66.909 -50.216 -0.119 1.00 30.86 O
ATOM 5 O5' C B2440 68.026 -52.254 -1.135 1.00 41.68 O
ATOM 6 C5' C B2440 67.977 -53.571 -1.647 1.00 42.34 C
ATOM 7 C4' C B2440 68.641 -54.554 -0.728 1.00 29.71 C
ATOM 8 O4' C B2440 70.033 -54.249 -0.706 1.00 24.03 O
ATOM 9 C3' C B2440 68.172 -54.518 0.720 1.00 38.93 C
ATOM 10 O3' C B2440 67.365 -55.677 1.085 1.00 51.99 O
ATOM 11 C2' C B2440 69.459 -54.456 1.562 1.00 31.40 C
ATOM 12 O2' C B2440 69.571 -55.484 2.535 1.00 38.09 O
ATOM 13 C1' C B2440 70.584 -54.547 0.544 1.00 36.78 C
ATOM 14 N1 C B2440 71.681 -53.591 0.804 1.00 39.78 N
ATOM 15 C2 C B2440 73.002 -53.995 1.096 1.00 35.11 C
ATOM 16 O2 C B2440 73.282 -55.218 1.115 1.00 29.56 O
ATOM 17 N3 C B2440 73.933 -53.030 1.344 1.00 25.35 N
ATOM 18 C4 C B2440 73.560 -51.749 1.327 1.00 29.22 C
ATOM 19 N4 C B2440 74.442 -50.794 1.566 1.00 27.98 N
ATOM 20 C5 C B2440 72.242 -51.338 1.027 1.00 35.33 C
ATOM 21 C6 C B2440 71.340 -52.280 0.773 1.00 37.31 C
ATOM 22 P U B2441 67.611 -57.173 0.498 1.00 27.25 P
ATOM 23 OP1 U B2441 67.521 -58.095 1.642 1.00 39.87 O
ATOM 24 OP2 U B2441 68.843 -57.147 -0.282 1.00 47.86 O
ATOM 25 O5' U B2441 66.368 -57.399 -0.463 1.00 31.45 O
TER
ATOM 2 P G A2335 81.336 -62.443 -4.937 1.00 33.77 P
ATOM 3 OP1 G A2335 79.920 -62.772 -4.653 1.00 38.13 O
ATOM 4 OP2 G A2335 81.802 -62.505 -6.328 1.00 32.41 O
ATOM 5 O5' G A2335 81.709 -61.039 -4.306 1.00 21.85 O
ATOM 6 C5' G A2335 81.539 -60.784 -2.931 1.00 18.30 C
ATOM 7 C4' G A2335 81.554 -59.310 -2.679 1.00 22.94 C
ATOM 8 O4' G A2335 80.262 -58.749 -2.965 1.00 31.36 O
ATOM 9 C3' G A2335 81.818 -58.880 -1.271 1.00 39.39 C
ATOM 10 O3' G A2335 83.184 -58.945 -0.940 1.00 58.49 O
ATOM 11 C2' G A2335 81.243 -57.472 -1.271 1.00 33.96 C
ATOM 12 O2' G A2335 82.062 -56.601 -2.007 1.00 44.04 O
ATOM 13 C1' G A2335 79.987 -57.694 -2.073 1.00 31.90 C
ATOM 14 N9 G A2335 78.844 -58.077 -1.208 1.00 30.33 N
ATOM 15 C8 G A2335 78.556 -59.328 -0.768 1.00 29.66 C
ATOM 16 N7 G A2335 77.519 -59.368 -0.004 1.00 33.64 N
ATOM 17 C5 G A2335 77.090 -58.064 0.083 1.00 26.12 C
ATOM 18 C6 G A2335 75.995 -57.527 0.790 1.00 28.61 C
ATOM 19 O6 G A2335 75.141 -58.098 1.500 1.00 33.34 O
ATOM 20 N1 G A2335 75.957 -56.170 0.608 1.00 22.19 N
ATOM 21 C2 G A2335 76.804 -55.450 -0.163 1.00 21.92 C
ATOM 22 N2 G A2335 76.570 -54.139 -0.226 1.00 28.73 N
ATOM 23 N3 G A2335 77.799 -55.938 -0.818 1.00 21.89 N
ATOM 24 C4 G A2335 77.891 -57.253 -0.649 1.00 24.74 C
ATOM 25 P U A2336 83.698 -58.502 0.512 1.00 44.01 P
ATOM 26 OP1 U A2336 85.165 -58.735 0.532 1.00 85.40 O
ATOM 27 OP2 U A2336 82.854 -59.184 1.525 1.00 46.82 O
ATOM 28 O5' U A2336 83.407 -56.953 0.503 1.00 76.25 O
TER
ATOM 1 O3' U B2439 66.425 -50.888 -2.487 1.00 32.03 O
ATOM 2 P C B2440 66.691 -51.421 -0.988 1.00 37.09 P
ATOM 3 OP1 C B2440 65.577 -52.346 -0.646 1.00 32.04 O
ATOM 4 OP2 C B2440 66.909 -50.216 -0.119 1.00 30.86 O
ATOM 5 O5' C B2440 68.026 -52.254 -1.135 1.00 41.68 O
ATOM 6 C5' C B2440 67.977 -53.571 -1.647 1.00 42.34 C
ATOM 7 C4' C B2440 68.641 -54.554 -0.728 1.00 29.71 C
ATOM 8 O4' C B2440 70.033 -54.249 -0.706 1.00 24.03 O
ATOM 9 C3' C B2440 68.172 -54.518 0.720 1.00 38.93 C
ATOM 10 O3' C B2440 67.365 -55.677 1.085 1.00 51.99 O
ATOM 11 C2' C B2440 69.459 -54.456 1.562 1.00 31.40 C
ATOM 12 O2' C B2440 69.571 -55.484 2.535 1.00 38.09 O
ATOM 13 C1' C B2440 70.584 -54.547 0.544 1.00 36.78 C
ATOM 14 N1 C B2440 71.681 -53.591 0.804 1.00 39.78 N
ATOM 15 C2 C B2440 73.002 -53.995 1.096 1.00 35.11 C
ATOM 16 O2 C B2440 73.282 -55.218 1.115 1.00 29.56 O
ATOM 17 N3 C B2440 73.933 -53.030 1.344 1.00 25.35 N
ATOM 18 C4 C B2440 73.560 -51.749 1.327 1.00 29.22 C
ATOM 19 N4 C B2440 74.442 -50.794 1.566 1.00 27.98 N
ATOM 20 C5 C B2440 72.242 -51.338 1.027 1.00 35.33 C
ATOM 21 C6 C B2440 71.340 -52.280 0.773 1.00 37.31 C
ATOM 22 P U B2441 67.611 -57.173 0.498 1.00 27.25 P
ATOM 23 OP1 U B2441 67.521 -58.095 1.642 1.00 39.87 O
ATOM 24 OP2 U B2441 68.843 -57.147 -0.282 1.00 47.86 O
ATOM 25 O5' U B2441 66.368 -57.399 -0.463 1.00 31.45 O
TER
Atoms:
OP1: (79.920,-62.772,-4.653)
OP2: (81.802,-62.505,-6.328)
C3': (81.818,-58.880,-1.271)
C1': (79.987,-57.694,-2.073)
C5': (81.539,-60.784,-2.931)
O6: (75.141,-58.098,1.500)
O4': (80.262,-58.749,-2.965)
C8: (78.556,-59.328,-0.768)
C2: (76.804,-55.450,-0.163)
C6: (75.995,-57.527,0.790)
C5: (77.090,-58.064,0.083)
C4: (77.891,-57.253,-0.649)
P: (81.336,-62.443,-4.937)
C4': (81.554,-59.310,-2.679)
C2': (81.243,-57.472,-1.271)
O2': (82.062,-56.601,-2.007)
N1: (75.957,-56.170,0.608)
N2: (76.570,-54.139,-0.226)
N3: (77.799,-55.938,-0.818)
N7: (77.519,-59.368,-0.004)
N9: (78.844,-58.077,-1.208)
O5': (81.709,-61.039,-4.306)
O3': (83.184,-58.945,-0.940)
OP2: (81.802,-62.505,-6.328)
C3': (81.818,-58.880,-1.271)
C1': (79.987,-57.694,-2.073)
C5': (81.539,-60.784,-2.931)
O6: (75.141,-58.098,1.500)
O4': (80.262,-58.749,-2.965)
C8: (78.556,-59.328,-0.768)
C2: (76.804,-55.450,-0.163)
C6: (75.995,-57.527,0.790)
C5: (77.090,-58.064,0.083)
C4: (77.891,-57.253,-0.649)
P: (81.336,-62.443,-4.937)
C4': (81.554,-59.310,-2.679)
C2': (81.243,-57.472,-1.271)
O2': (82.062,-56.601,-2.007)
N1: (75.957,-56.170,0.608)
N2: (76.570,-54.139,-0.226)
N3: (77.799,-55.938,-0.818)
N7: (77.519,-59.368,-0.004)
N9: (78.844,-58.077,-1.208)
O5': (81.709,-61.039,-4.306)
O3': (83.184,-58.945,-0.940)
C2: (73.002,-53.995,1.096)
OP1: (65.577,-52.346,-0.646)
OP2: (66.909,-50.216,-0.119)
C4: (73.560,-51.749,1.327)
O5': (68.026,-52.254,-1.135)
C3': (68.172,-54.518,0.720)
C1': (70.584,-54.547,0.544)
O4': (70.033,-54.249,-0.706)
C5': (67.977,-53.571,-1.647)
P: (66.691,-51.421,-0.988)
O2: (73.282,-55.218,1.115)
C4': (68.641,-54.554,-0.728)
C2': (69.459,-54.456,1.562)
O2': (69.571,-55.484,2.535)
N1: (71.681,-53.591,0.804)
N3: (73.933,-53.030,1.344)
N4: (74.442,-50.794,1.566)
C6: (71.340,-52.280,0.773)
C5: (72.242,-51.338,1.027)
O3': (67.365,-55.677,1.085)
OP1: (65.577,-52.346,-0.646)
OP2: (66.909,-50.216,-0.119)
C4: (73.560,-51.749,1.327)
O5': (68.026,-52.254,-1.135)
C3': (68.172,-54.518,0.720)
C1': (70.584,-54.547,0.544)
O4': (70.033,-54.249,-0.706)
C5': (67.977,-53.571,-1.647)
P: (66.691,-51.421,-0.988)
O2: (73.282,-55.218,1.115)
C4': (68.641,-54.554,-0.728)
C2': (69.459,-54.456,1.562)
O2': (69.571,-55.484,2.535)
N1: (71.681,-53.591,0.804)
N3: (73.933,-53.030,1.344)
N4: (74.442,-50.794,1.566)
C6: (71.340,-52.280,0.773)
C5: (72.242,-51.338,1.027)
O3': (67.365,-55.677,1.085)
Image (generated by PyMOL):