Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1353:A2207
Extra
PDB:
ATOM 1 O3' A A1352 -37.756 -32.890 59.414 1.00 0.13 O
ATOM 2 P G A1353 -39.121 -32.519 60.119 1.00 1.42 P
ATOM 3 OP1 G A1353 -39.470 -33.638 61.029 1.00 1.42 O
ATOM 4 OP2 G A1353 -40.046 -32.155 59.050 1.00 1.42 O
ATOM 5 O5' G A1353 -38.744 -31.247 60.967 1.00 1.42 O
ATOM 6 C5' G A1353 -39.728 -30.309 61.311 1.00 1.42 C
ATOM 7 C4' G A1353 -39.107 -28.995 61.670 1.00 1.42 C
ATOM 8 O4' G A1353 -38.044 -28.669 60.732 1.00 1.42 O
ATOM 9 C3' G A1353 -40.021 -27.804 61.585 1.00 1.42 C
ATOM 10 O3' G A1353 -40.894 -27.712 62.665 1.00 1.42 O
ATOM 11 C2' G A1353 -39.047 -26.662 61.458 1.00 1.42 C
ATOM 12 O2' G A1353 -38.381 -26.430 62.692 1.00 1.42 O
ATOM 13 C1' G A1353 -38.059 -27.281 60.479 1.00 1.42 C
ATOM 14 N9 G A1353 -38.484 -27.088 59.092 1.00 1.56 N
ATOM 15 C8 G A1353 -38.741 -28.076 58.173 1.00 1.56 C
ATOM 16 N7 G A1353 -39.085 -27.587 57.010 1.00 1.56 N
ATOM 17 C5 G A1353 -39.060 -26.194 57.179 1.00 1.56 C
ATOM 18 C6 G A1353 -39.337 -25.123 56.288 1.00 1.56 C
ATOM 19 O6 G A1353 -39.684 -25.084 55.103 1.00 1.56 O
ATOM 20 N1 G A1353 -39.178 -23.932 56.909 1.00 1.56 N
ATOM 21 C2 G A1353 -38.798 -23.760 58.190 1.00 1.56 C
ATOM 22 N2 G A1353 -38.711 -22.476 58.562 1.00 1.56 N
ATOM 23 N3 G A1353 -38.535 -24.715 59.046 1.00 1.56 N
ATOM 24 C4 G A1353 -38.695 -25.895 58.468 1.00 1.56 C
ATOM 25 P G A1354 -42.410 -28.130 62.434 1.00 8.46 P
ATOM 26 OP1 G A1354 -43.086 -28.061 63.745 1.00 8.46 O
ATOM 27 OP2 G A1354 -42.393 -29.429 61.707 1.00 8.46 O
ATOM 28 O5' G A1354 -42.937 -26.964 61.477 1.00 8.46 O
TER
ATOM 1 O3' U B2206 -39.906 -15.314 50.837 1.00 46.76 O
ATOM 2 P C B2207 -40.741 -15.086 52.179 1.00 5.98 P
ATOM 3 OP1 C B2207 -41.632 -13.935 51.920 1.00 5.98 O
ATOM 4 OP2 C B2207 -39.759 -15.015 53.299 1.00 5.98 O
ATOM 5 O5' C B2207 -41.600 -16.424 52.306 1.00 5.98 O
ATOM 6 C5' C B2207 -41.501 -17.435 51.322 1.00 5.98 C
ATOM 7 C4' C B2207 -41.787 -18.799 51.882 1.00 5.98 C
ATOM 8 O4' C B2207 -40.547 -19.457 52.228 1.00 5.98 O
ATOM 9 C3' C B2207 -42.605 -18.843 53.158 1.00 5.98 C
ATOM 10 O3' C B2207 -44.001 -18.687 52.926 1.00 5.98 O
ATOM 11 C2' C B2207 -42.229 -20.201 53.733 1.00 5.98 C
ATOM 12 O2' C B2207 -42.959 -21.241 53.101 1.00 5.98 O
ATOM 13 C1' C B2207 -40.754 -20.310 53.329 1.00 5.98 C
ATOM 14 N1 C B2207 -39.872 -19.885 54.408 1.00 5.94 N
ATOM 15 C2 C B2207 -39.850 -20.638 55.558 1.00 5.94 C
ATOM 16 O2 C B2207 -40.563 -21.627 55.569 1.00 5.94 O
ATOM 17 N3 C B2207 -39.096 -20.288 56.615 1.00 5.94 N
ATOM 18 C4 C B2207 -38.369 -19.197 56.534 1.00 5.94 C
ATOM 19 N4 C B2207 -37.638 -18.879 57.585 1.00 5.94 N
ATOM 20 C5 C B2207 -38.354 -18.382 55.370 1.00 5.94 C
ATOM 21 C6 C B2207 -39.120 -18.756 54.331 1.00 5.94 C
ATOM 22 P C B2208 -44.926 -17.842 53.953 1.00 0.10 P
ATOM 23 OP1 C B2208 -46.334 -18.123 53.600 1.00 0.10 O
ATOM 24 OP2 C B2208 -44.452 -16.435 53.916 1.00 0.10 O
ATOM 25 O5' C B2208 -44.595 -18.497 55.356 1.00 0.10 O
TER
ATOM 2 P G A1353 -39.121 -32.519 60.119 1.00 1.42 P
ATOM 3 OP1 G A1353 -39.470 -33.638 61.029 1.00 1.42 O
ATOM 4 OP2 G A1353 -40.046 -32.155 59.050 1.00 1.42 O
ATOM 5 O5' G A1353 -38.744 -31.247 60.967 1.00 1.42 O
ATOM 6 C5' G A1353 -39.728 -30.309 61.311 1.00 1.42 C
ATOM 7 C4' G A1353 -39.107 -28.995 61.670 1.00 1.42 C
ATOM 8 O4' G A1353 -38.044 -28.669 60.732 1.00 1.42 O
ATOM 9 C3' G A1353 -40.021 -27.804 61.585 1.00 1.42 C
ATOM 10 O3' G A1353 -40.894 -27.712 62.665 1.00 1.42 O
ATOM 11 C2' G A1353 -39.047 -26.662 61.458 1.00 1.42 C
ATOM 12 O2' G A1353 -38.381 -26.430 62.692 1.00 1.42 O
ATOM 13 C1' G A1353 -38.059 -27.281 60.479 1.00 1.42 C
ATOM 14 N9 G A1353 -38.484 -27.088 59.092 1.00 1.56 N
ATOM 15 C8 G A1353 -38.741 -28.076 58.173 1.00 1.56 C
ATOM 16 N7 G A1353 -39.085 -27.587 57.010 1.00 1.56 N
ATOM 17 C5 G A1353 -39.060 -26.194 57.179 1.00 1.56 C
ATOM 18 C6 G A1353 -39.337 -25.123 56.288 1.00 1.56 C
ATOM 19 O6 G A1353 -39.684 -25.084 55.103 1.00 1.56 O
ATOM 20 N1 G A1353 -39.178 -23.932 56.909 1.00 1.56 N
ATOM 21 C2 G A1353 -38.798 -23.760 58.190 1.00 1.56 C
ATOM 22 N2 G A1353 -38.711 -22.476 58.562 1.00 1.56 N
ATOM 23 N3 G A1353 -38.535 -24.715 59.046 1.00 1.56 N
ATOM 24 C4 G A1353 -38.695 -25.895 58.468 1.00 1.56 C
ATOM 25 P G A1354 -42.410 -28.130 62.434 1.00 8.46 P
ATOM 26 OP1 G A1354 -43.086 -28.061 63.745 1.00 8.46 O
ATOM 27 OP2 G A1354 -42.393 -29.429 61.707 1.00 8.46 O
ATOM 28 O5' G A1354 -42.937 -26.964 61.477 1.00 8.46 O
TER
ATOM 1 O3' U B2206 -39.906 -15.314 50.837 1.00 46.76 O
ATOM 2 P C B2207 -40.741 -15.086 52.179 1.00 5.98 P
ATOM 3 OP1 C B2207 -41.632 -13.935 51.920 1.00 5.98 O
ATOM 4 OP2 C B2207 -39.759 -15.015 53.299 1.00 5.98 O
ATOM 5 O5' C B2207 -41.600 -16.424 52.306 1.00 5.98 O
ATOM 6 C5' C B2207 -41.501 -17.435 51.322 1.00 5.98 C
ATOM 7 C4' C B2207 -41.787 -18.799 51.882 1.00 5.98 C
ATOM 8 O4' C B2207 -40.547 -19.457 52.228 1.00 5.98 O
ATOM 9 C3' C B2207 -42.605 -18.843 53.158 1.00 5.98 C
ATOM 10 O3' C B2207 -44.001 -18.687 52.926 1.00 5.98 O
ATOM 11 C2' C B2207 -42.229 -20.201 53.733 1.00 5.98 C
ATOM 12 O2' C B2207 -42.959 -21.241 53.101 1.00 5.98 O
ATOM 13 C1' C B2207 -40.754 -20.310 53.329 1.00 5.98 C
ATOM 14 N1 C B2207 -39.872 -19.885 54.408 1.00 5.94 N
ATOM 15 C2 C B2207 -39.850 -20.638 55.558 1.00 5.94 C
ATOM 16 O2 C B2207 -40.563 -21.627 55.569 1.00 5.94 O
ATOM 17 N3 C B2207 -39.096 -20.288 56.615 1.00 5.94 N
ATOM 18 C4 C B2207 -38.369 -19.197 56.534 1.00 5.94 C
ATOM 19 N4 C B2207 -37.638 -18.879 57.585 1.00 5.94 N
ATOM 20 C5 C B2207 -38.354 -18.382 55.370 1.00 5.94 C
ATOM 21 C6 C B2207 -39.120 -18.756 54.331 1.00 5.94 C
ATOM 22 P C B2208 -44.926 -17.842 53.953 1.00 0.10 P
ATOM 23 OP1 C B2208 -46.334 -18.123 53.600 1.00 0.10 O
ATOM 24 OP2 C B2208 -44.452 -16.435 53.916 1.00 0.10 O
ATOM 25 O5' C B2208 -44.595 -18.497 55.356 1.00 0.10 O
TER
Atoms:
OP1: (-39.470,-33.638,61.029)
OP2: (-40.046,-32.155,59.050)
C3': (-40.021,-27.804,61.585)
C1': (-38.059,-27.281,60.479)
C5': (-39.728,-30.309,61.311)
O6: (-39.684,-25.084,55.103)
O4': (-38.044,-28.669,60.732)
C8: (-38.741,-28.076,58.173)
C2: (-38.798,-23.760,58.190)
C6: (-39.337,-25.123,56.288)
C5: (-39.060,-26.194,57.179)
C4: (-38.695,-25.895,58.468)
P: (-39.121,-32.519,60.119)
C4': (-39.107,-28.995,61.670)
C2': (-39.047,-26.662,61.458)
O2': (-38.381,-26.430,62.692)
N1: (-39.178,-23.932,56.909)
N2: (-38.711,-22.476,58.562)
N3: (-38.535,-24.715,59.046)
N7: (-39.085,-27.587,57.010)
N9: (-38.484,-27.088,59.092)
O5': (-38.744,-31.247,60.967)
O3': (-40.894,-27.712,62.665)
OP2: (-40.046,-32.155,59.050)
C3': (-40.021,-27.804,61.585)
C1': (-38.059,-27.281,60.479)
C5': (-39.728,-30.309,61.311)
O6: (-39.684,-25.084,55.103)
O4': (-38.044,-28.669,60.732)
C8: (-38.741,-28.076,58.173)
C2: (-38.798,-23.760,58.190)
C6: (-39.337,-25.123,56.288)
C5: (-39.060,-26.194,57.179)
C4: (-38.695,-25.895,58.468)
P: (-39.121,-32.519,60.119)
C4': (-39.107,-28.995,61.670)
C2': (-39.047,-26.662,61.458)
O2': (-38.381,-26.430,62.692)
N1: (-39.178,-23.932,56.909)
N2: (-38.711,-22.476,58.562)
N3: (-38.535,-24.715,59.046)
N7: (-39.085,-27.587,57.010)
N9: (-38.484,-27.088,59.092)
O5': (-38.744,-31.247,60.967)
O3': (-40.894,-27.712,62.665)
C2: (-39.850,-20.638,55.558)
OP1: (-41.632,-13.935,51.920)
OP2: (-39.759,-15.015,53.299)
C4: (-38.369,-19.197,56.534)
O5': (-41.600,-16.424,52.306)
C3': (-42.605,-18.843,53.158)
C1': (-40.754,-20.310,53.329)
O4': (-40.547,-19.457,52.228)
C5': (-41.501,-17.435,51.322)
P: (-40.741,-15.086,52.179)
O2: (-40.563,-21.627,55.569)
C4': (-41.787,-18.799,51.882)
C2': (-42.229,-20.201,53.733)
O2': (-42.959,-21.241,53.101)
N1: (-39.872,-19.885,54.408)
N3: (-39.096,-20.288,56.615)
N4: (-37.638,-18.879,57.585)
C6: (-39.120,-18.756,54.331)
C5: (-38.354,-18.382,55.370)
O3': (-44.001,-18.687,52.926)
OP1: (-41.632,-13.935,51.920)
OP2: (-39.759,-15.015,53.299)
C4: (-38.369,-19.197,56.534)
O5': (-41.600,-16.424,52.306)
C3': (-42.605,-18.843,53.158)
C1': (-40.754,-20.310,53.329)
O4': (-40.547,-19.457,52.228)
C5': (-41.501,-17.435,51.322)
P: (-40.741,-15.086,52.179)
O2: (-40.563,-21.627,55.569)
C4': (-41.787,-18.799,51.882)
C2': (-42.229,-20.201,53.733)
O2': (-42.959,-21.241,53.101)
N1: (-39.872,-19.885,54.408)
N3: (-39.096,-20.288,56.615)
N4: (-37.638,-18.879,57.585)
C6: (-39.120,-18.756,54.331)
C5: (-38.354,-18.382,55.370)
O3': (-44.001,-18.687,52.926)
Image (generated by PyMOL):