Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2498:A2603
Extra
PDB:
ATOM 1 O3' U A2497 -72.299 -64.312 -0.085 1.00 0.01 O
ATOM 2 P G A2498 -71.741 -62.951 0.535 1.00 0.01 P
ATOM 3 OP1 G A2498 -70.347 -62.819 0.120 1.00 0.01 O
ATOM 4 OP2 G A2498 -72.059 -62.949 1.966 1.00 0.01 O
ATOM 5 O5' G A2498 -72.636 -61.883 -0.181 1.00 0.01 O
ATOM 6 C5' G A2498 -72.348 -61.449 -1.487 1.00 0.01 C
ATOM 7 C4' G A2498 -72.317 -59.954 -1.539 1.00 0.01 C
ATOM 8 O4' G A2498 -71.028 -59.475 -1.100 1.00 0.01 O
ATOM 9 C3' G A2498 -72.496 -59.318 -2.893 1.00 0.01 C
ATOM 10 O3' G A2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 11 C2' G A2498 -71.943 -57.935 -2.615 1.00 0.01 C
ATOM 12 O2' G A2498 -72.859 -57.189 -1.836 1.00 0.01 O
ATOM 13 C1' G A2498 -70.746 -58.273 -1.725 1.00 0.01 C
ATOM 14 N9 G A2498 -69.495 -58.429 -2.480 1.00 0.01 N
ATOM 15 C8 G A2498 -68.888 -59.511 -3.055 1.00 0.01 C
ATOM 16 N7 G A2498 -67.731 -59.215 -3.624 1.00 0.01 N
ATOM 17 C5 G A2498 -67.585 -57.865 -3.399 1.00 0.01 C
ATOM 18 C6 G A2498 -66.570 -56.960 -3.743 1.00 0.01 C
ATOM 19 O6 G A2498 -65.508 -57.145 -4.366 1.00 0.01 O
ATOM 20 N1 G A2498 -66.879 -55.686 -3.281 1.00 0.01 N
ATOM 21 C2 G A2498 -67.990 -55.331 -2.574 1.00 0.01 C
ATOM 22 N2 G A2498 -68.128 -54.062 -2.196 1.00 0.01 N
ATOM 23 N3 G A2498 -68.926 -56.158 -2.241 1.00 0.01 N
ATOM 24 C4 G A2498 -68.653 -57.387 -2.689 1.00 0.01 C
ATOM 25 P U A2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 26 OP1 U A2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 27 OP2 U A2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 28 O5' U A2499 -74.590 -57.433 -4.769 1.00 7.17 O
TER
ATOM 1 O3' U B2602 -57.925 -50.787 -0.525 1.00 0.01 O
ATOM 2 P C B2603 -58.040 -51.001 -2.074 1.00 0.01 P
ATOM 3 OP1 C B2603 -56.683 -51.094 -2.594 1.00 0.01 O
ATOM 4 OP2 C B2603 -58.937 -49.952 -2.587 1.00 0.01 O
ATOM 5 O5' C B2603 -58.730 -52.405 -2.188 1.00 0.01 O
ATOM 6 C5' C B2603 -59.294 -53.050 -1.070 1.00 0.01 C
ATOM 7 C4' C B2603 -60.147 -54.192 -1.517 1.00 0.01 C
ATOM 8 O4' C B2603 -61.490 -53.709 -1.734 1.00 0.01 O
ATOM 9 C3' C B2603 -59.724 -54.816 -2.846 1.00 0.01 C
ATOM 10 O3' C B2603 -60.002 -56.218 -2.844 1.00 0.01 O
ATOM 11 C2' C B2603 -60.648 -54.124 -3.819 1.00 0.01 C
ATOM 12 O2' C B2603 -60.824 -54.800 -5.034 1.00 0.01 O
ATOM 13 C1' C B2603 -61.906 -54.099 -3.000 1.00 0.01 C
ATOM 14 N1 C B2603 -62.928 -53.178 -3.467 1.00 0.20 N
ATOM 15 C2 C B2603 -64.251 -53.554 -3.210 1.00 0.20 C
ATOM 16 O2 C B2603 -64.452 -54.601 -2.568 1.00 0.20 O
ATOM 17 N3 C B2603 -65.285 -52.771 -3.603 1.00 0.20 N
ATOM 18 C4 C B2603 -65.029 -51.648 -4.255 1.00 0.20 C
ATOM 19 N4 C B2603 -66.068 -50.922 -4.645 1.00 0.20 N
ATOM 20 C5 C B2603 -63.696 -51.241 -4.539 1.00 0.20 C
ATOM 21 C6 C B2603 -62.685 -52.027 -4.129 1.00 0.20 C
ATOM 22 P C B2604 -59.129 -57.227 -3.737 1.00 0.01 P
ATOM 23 OP1 C B2604 -58.046 -56.466 -4.327 1.00 0.01 O
ATOM 24 OP2 C B2604 -60.036 -57.914 -4.626 1.00 0.01 O
ATOM 25 O5' C B2604 -58.564 -58.233 -2.664 1.00 0.01 O
TER
ATOM 2 P G A2498 -71.741 -62.951 0.535 1.00 0.01 P
ATOM 3 OP1 G A2498 -70.347 -62.819 0.120 1.00 0.01 O
ATOM 4 OP2 G A2498 -72.059 -62.949 1.966 1.00 0.01 O
ATOM 5 O5' G A2498 -72.636 -61.883 -0.181 1.00 0.01 O
ATOM 6 C5' G A2498 -72.348 -61.449 -1.487 1.00 0.01 C
ATOM 7 C4' G A2498 -72.317 -59.954 -1.539 1.00 0.01 C
ATOM 8 O4' G A2498 -71.028 -59.475 -1.100 1.00 0.01 O
ATOM 9 C3' G A2498 -72.496 -59.318 -2.893 1.00 0.01 C
ATOM 10 O3' G A2498 -73.858 -59.331 -3.318 1.00 0.01 O
ATOM 11 C2' G A2498 -71.943 -57.935 -2.615 1.00 0.01 C
ATOM 12 O2' G A2498 -72.859 -57.189 -1.836 1.00 0.01 O
ATOM 13 C1' G A2498 -70.746 -58.273 -1.725 1.00 0.01 C
ATOM 14 N9 G A2498 -69.495 -58.429 -2.480 1.00 0.01 N
ATOM 15 C8 G A2498 -68.888 -59.511 -3.055 1.00 0.01 C
ATOM 16 N7 G A2498 -67.731 -59.215 -3.624 1.00 0.01 N
ATOM 17 C5 G A2498 -67.585 -57.865 -3.399 1.00 0.01 C
ATOM 18 C6 G A2498 -66.570 -56.960 -3.743 1.00 0.01 C
ATOM 19 O6 G A2498 -65.508 -57.145 -4.366 1.00 0.01 O
ATOM 20 N1 G A2498 -66.879 -55.686 -3.281 1.00 0.01 N
ATOM 21 C2 G A2498 -67.990 -55.331 -2.574 1.00 0.01 C
ATOM 22 N2 G A2498 -68.128 -54.062 -2.196 1.00 0.01 N
ATOM 23 N3 G A2498 -68.926 -56.158 -2.241 1.00 0.01 N
ATOM 24 C4 G A2498 -68.653 -57.387 -2.689 1.00 0.01 C
ATOM 25 P U A2499 -74.278 -58.989 -4.840 1.00 7.17 P
ATOM 26 OP1 U A2499 -75.536 -59.726 -5.110 1.00 7.17 O
ATOM 27 OP2 U A2499 -73.103 -59.248 -5.710 1.00 7.17 O
ATOM 28 O5' U A2499 -74.590 -57.433 -4.769 1.00 7.17 O
TER
ATOM 1 O3' U B2602 -57.925 -50.787 -0.525 1.00 0.01 O
ATOM 2 P C B2603 -58.040 -51.001 -2.074 1.00 0.01 P
ATOM 3 OP1 C B2603 -56.683 -51.094 -2.594 1.00 0.01 O
ATOM 4 OP2 C B2603 -58.937 -49.952 -2.587 1.00 0.01 O
ATOM 5 O5' C B2603 -58.730 -52.405 -2.188 1.00 0.01 O
ATOM 6 C5' C B2603 -59.294 -53.050 -1.070 1.00 0.01 C
ATOM 7 C4' C B2603 -60.147 -54.192 -1.517 1.00 0.01 C
ATOM 8 O4' C B2603 -61.490 -53.709 -1.734 1.00 0.01 O
ATOM 9 C3' C B2603 -59.724 -54.816 -2.846 1.00 0.01 C
ATOM 10 O3' C B2603 -60.002 -56.218 -2.844 1.00 0.01 O
ATOM 11 C2' C B2603 -60.648 -54.124 -3.819 1.00 0.01 C
ATOM 12 O2' C B2603 -60.824 -54.800 -5.034 1.00 0.01 O
ATOM 13 C1' C B2603 -61.906 -54.099 -3.000 1.00 0.01 C
ATOM 14 N1 C B2603 -62.928 -53.178 -3.467 1.00 0.20 N
ATOM 15 C2 C B2603 -64.251 -53.554 -3.210 1.00 0.20 C
ATOM 16 O2 C B2603 -64.452 -54.601 -2.568 1.00 0.20 O
ATOM 17 N3 C B2603 -65.285 -52.771 -3.603 1.00 0.20 N
ATOM 18 C4 C B2603 -65.029 -51.648 -4.255 1.00 0.20 C
ATOM 19 N4 C B2603 -66.068 -50.922 -4.645 1.00 0.20 N
ATOM 20 C5 C B2603 -63.696 -51.241 -4.539 1.00 0.20 C
ATOM 21 C6 C B2603 -62.685 -52.027 -4.129 1.00 0.20 C
ATOM 22 P C B2604 -59.129 -57.227 -3.737 1.00 0.01 P
ATOM 23 OP1 C B2604 -58.046 -56.466 -4.327 1.00 0.01 O
ATOM 24 OP2 C B2604 -60.036 -57.914 -4.626 1.00 0.01 O
ATOM 25 O5' C B2604 -58.564 -58.233 -2.664 1.00 0.01 O
TER
Atoms:
OP1: (-70.347,-62.819,0.120)
OP2: (-72.059,-62.949,1.966)
C3': (-72.496,-59.318,-2.893)
C1': (-70.746,-58.273,-1.725)
C5': (-72.348,-61.449,-1.487)
O6: (-65.508,-57.145,-4.366)
O4': (-71.028,-59.475,-1.100)
C8: (-68.888,-59.511,-3.055)
C2: (-67.990,-55.331,-2.574)
C6: (-66.570,-56.960,-3.743)
C5: (-67.585,-57.865,-3.399)
C4: (-68.653,-57.387,-2.689)
P: (-71.741,-62.951,0.535)
C4': (-72.317,-59.954,-1.539)
C2': (-71.943,-57.935,-2.615)
O2': (-72.859,-57.189,-1.836)
N1: (-66.879,-55.686,-3.281)
N2: (-68.128,-54.062,-2.196)
N3: (-68.926,-56.158,-2.241)
N7: (-67.731,-59.215,-3.624)
N9: (-69.495,-58.429,-2.480)
O5': (-72.636,-61.883,-0.181)
O3': (-73.858,-59.331,-3.318)
OP2: (-72.059,-62.949,1.966)
C3': (-72.496,-59.318,-2.893)
C1': (-70.746,-58.273,-1.725)
C5': (-72.348,-61.449,-1.487)
O6: (-65.508,-57.145,-4.366)
O4': (-71.028,-59.475,-1.100)
C8: (-68.888,-59.511,-3.055)
C2: (-67.990,-55.331,-2.574)
C6: (-66.570,-56.960,-3.743)
C5: (-67.585,-57.865,-3.399)
C4: (-68.653,-57.387,-2.689)
P: (-71.741,-62.951,0.535)
C4': (-72.317,-59.954,-1.539)
C2': (-71.943,-57.935,-2.615)
O2': (-72.859,-57.189,-1.836)
N1: (-66.879,-55.686,-3.281)
N2: (-68.128,-54.062,-2.196)
N3: (-68.926,-56.158,-2.241)
N7: (-67.731,-59.215,-3.624)
N9: (-69.495,-58.429,-2.480)
O5': (-72.636,-61.883,-0.181)
O3': (-73.858,-59.331,-3.318)
C2: (-64.251,-53.554,-3.210)
OP1: (-56.683,-51.094,-2.594)
OP2: (-58.937,-49.952,-2.587)
C4: (-65.029,-51.648,-4.255)
O5': (-58.730,-52.405,-2.188)
C3': (-59.724,-54.816,-2.846)
C1': (-61.906,-54.099,-3.000)
O4': (-61.490,-53.709,-1.734)
C5': (-59.294,-53.050,-1.070)
P: (-58.040,-51.001,-2.074)
O2: (-64.452,-54.601,-2.568)
C4': (-60.147,-54.192,-1.517)
C2': (-60.648,-54.124,-3.819)
O2': (-60.824,-54.800,-5.034)
N1: (-62.928,-53.178,-3.467)
N3: (-65.285,-52.771,-3.603)
N4: (-66.068,-50.922,-4.645)
C6: (-62.685,-52.027,-4.129)
C5: (-63.696,-51.241,-4.539)
O3': (-60.002,-56.218,-2.844)
OP1: (-56.683,-51.094,-2.594)
OP2: (-58.937,-49.952,-2.587)
C4: (-65.029,-51.648,-4.255)
O5': (-58.730,-52.405,-2.188)
C3': (-59.724,-54.816,-2.846)
C1': (-61.906,-54.099,-3.000)
O4': (-61.490,-53.709,-1.734)
C5': (-59.294,-53.050,-1.070)
P: (-58.040,-51.001,-2.074)
O2: (-64.452,-54.601,-2.568)
C4': (-60.147,-54.192,-1.517)
C2': (-60.648,-54.124,-3.819)
O2': (-60.824,-54.800,-5.034)
N1: (-62.928,-53.178,-3.467)
N3: (-65.285,-52.771,-3.603)
N4: (-66.068,-50.922,-4.645)
C6: (-62.685,-52.027,-4.129)
C5: (-63.696,-51.241,-4.539)
O3': (-60.002,-56.218,-2.844)
Image (generated by PyMOL):