Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1921:A1917
Extra
PDB:
ATOM 1 O3' A A1920 -45.400 128.984 106.516 1.00 9.61 O
ATOM 2 P G A1921 -46.705 128.158 106.070 1.00 23.81 P
ATOM 3 OP1 G A1921 -46.216 126.936 105.362 1.00 23.81 O
ATOM 4 OP2 G A1921 -47.597 129.115 105.346 1.00 23.81 O
ATOM 5 O5' G A1921 -47.372 127.754 107.466 1.00 23.81 O
ATOM 6 C5' G A1921 -47.526 126.386 107.845 1.00 23.81 C
ATOM 7 C4' G A1921 -46.609 126.004 108.989 1.00 23.81 C
ATOM 8 O4' G A1921 -46.616 127.053 109.996 1.00 23.81 O
ATOM 9 C3' G A1921 -47.002 124.738 109.724 1.00 23.81 C
ATOM 10 O3' G A1921 -45.847 124.141 110.261 1.00 23.81 O
ATOM 11 C2' G A1921 -47.846 125.261 110.856 1.00 23.81 C
ATOM 12 O2' G A1921 -47.945 124.390 111.955 1.00 23.81 O
ATOM 13 C1' G A1921 -47.096 126.534 111.217 1.00 23.81 C
ATOM 14 N9 G A1921 -47.952 127.533 111.841 1.00 23.23 N
ATOM 15 C8 G A1921 -47.826 128.131 113.061 1.00 23.23 C
ATOM 16 N7 G A1921 -48.821 128.925 113.318 1.00 23.23 N
ATOM 17 C5 G A1921 -49.657 128.810 112.216 1.00 23.23 C
ATOM 18 C6 G A1921 -50.889 129.430 111.904 1.00 23.23 C
ATOM 19 O6 G A1921 -51.544 130.240 112.567 1.00 23.23 O
ATOM 20 N1 G A1921 -51.370 129.040 110.669 1.00 23.23 N
ATOM 21 C2 G A1921 -50.762 128.165 109.833 1.00 23.23 C
ATOM 22 N2 G A1921 -51.396 127.921 108.687 1.00 23.23 N
ATOM 23 N3 G A1921 -49.624 127.571 110.102 1.00 23.23 N
ATOM 24 C4 G A1921 -49.134 127.944 111.302 1.00 23.23 C
ATOM 25 P G A1922 -44.794 123.454 109.288 1.00 15.78 P
ATOM 26 OP1 G A1922 -44.061 124.570 108.592 1.00 15.78 O
ATOM 27 OP2 G A1922 -45.524 122.430 108.477 1.00 15.78 O
ATOM 28 O5' G A1922 -43.842 122.728 110.306 1.00 15.78 O
TER
ATOM 1 O3' C B1916 -61.139 131.799 107.710 1.00 19.15 O
ATOM 2 P C B1917 -60.072 132.865 107.204 1.00 14.22 P
ATOM 3 OP1 C B1917 -60.667 134.209 107.423 1.00 14.22 O
ATOM 4 OP2 C B1917 -59.687 132.466 105.831 1.00 14.22 O
ATOM 5 O5' C B1917 -58.854 132.637 108.204 1.00 14.22 O
ATOM 6 C5' C B1917 -59.006 132.921 109.583 1.00 14.22 C
ATOM 7 C4' C B1917 -57.781 132.549 110.374 1.00 14.22 C
ATOM 8 O4' C B1917 -57.538 131.126 110.283 1.00 14.22 O
ATOM 9 C3' C B1917 -56.481 133.171 109.914 1.00 14.22 C
ATOM 10 O3' C B1917 -56.332 134.504 110.351 1.00 14.22 O
ATOM 11 C2' C B1917 -55.464 132.223 110.499 1.00 14.22 C
ATOM 12 O2' C B1917 -55.350 132.411 111.901 1.00 14.22 O
ATOM 13 C1' C B1917 -56.155 130.890 110.238 1.00 14.22 C
ATOM 14 N1 C B1917 -55.833 130.374 108.908 1.00 14.59 N
ATOM 15 C2 C B1917 -54.641 129.678 108.756 1.00 14.59 C
ATOM 16 O2 C B1917 -53.954 129.522 109.767 1.00 14.59 O
ATOM 17 N3 C B1917 -54.275 129.188 107.544 1.00 14.59 N
ATOM 18 C4 C B1917 -55.084 129.393 106.490 1.00 14.59 C
ATOM 19 N4 C B1917 -54.695 128.898 105.294 1.00 14.59 N
ATOM 20 C5 C B1917 -56.324 130.120 106.620 1.00 14.59 C
ATOM 21 C6 C B1917 -56.653 130.592 107.839 1.00 14.59 C
ATOM 22 P U B1918 -55.180 135.426 109.735 1.00 30.05 P
ATOM 23 OP1 U B1918 -55.658 136.829 109.765 1.00 30.05 O
ATOM 24 OP2 U B1918 -54.790 134.829 108.425 1.00 30.05 O
ATOM 25 O5' U B1918 -54.021 135.238 110.785 1.00 30.05 O
TER
ATOM 2 P G A1921 -46.705 128.158 106.070 1.00 23.81 P
ATOM 3 OP1 G A1921 -46.216 126.936 105.362 1.00 23.81 O
ATOM 4 OP2 G A1921 -47.597 129.115 105.346 1.00 23.81 O
ATOM 5 O5' G A1921 -47.372 127.754 107.466 1.00 23.81 O
ATOM 6 C5' G A1921 -47.526 126.386 107.845 1.00 23.81 C
ATOM 7 C4' G A1921 -46.609 126.004 108.989 1.00 23.81 C
ATOM 8 O4' G A1921 -46.616 127.053 109.996 1.00 23.81 O
ATOM 9 C3' G A1921 -47.002 124.738 109.724 1.00 23.81 C
ATOM 10 O3' G A1921 -45.847 124.141 110.261 1.00 23.81 O
ATOM 11 C2' G A1921 -47.846 125.261 110.856 1.00 23.81 C
ATOM 12 O2' G A1921 -47.945 124.390 111.955 1.00 23.81 O
ATOM 13 C1' G A1921 -47.096 126.534 111.217 1.00 23.81 C
ATOM 14 N9 G A1921 -47.952 127.533 111.841 1.00 23.23 N
ATOM 15 C8 G A1921 -47.826 128.131 113.061 1.00 23.23 C
ATOM 16 N7 G A1921 -48.821 128.925 113.318 1.00 23.23 N
ATOM 17 C5 G A1921 -49.657 128.810 112.216 1.00 23.23 C
ATOM 18 C6 G A1921 -50.889 129.430 111.904 1.00 23.23 C
ATOM 19 O6 G A1921 -51.544 130.240 112.567 1.00 23.23 O
ATOM 20 N1 G A1921 -51.370 129.040 110.669 1.00 23.23 N
ATOM 21 C2 G A1921 -50.762 128.165 109.833 1.00 23.23 C
ATOM 22 N2 G A1921 -51.396 127.921 108.687 1.00 23.23 N
ATOM 23 N3 G A1921 -49.624 127.571 110.102 1.00 23.23 N
ATOM 24 C4 G A1921 -49.134 127.944 111.302 1.00 23.23 C
ATOM 25 P G A1922 -44.794 123.454 109.288 1.00 15.78 P
ATOM 26 OP1 G A1922 -44.061 124.570 108.592 1.00 15.78 O
ATOM 27 OP2 G A1922 -45.524 122.430 108.477 1.00 15.78 O
ATOM 28 O5' G A1922 -43.842 122.728 110.306 1.00 15.78 O
TER
ATOM 1 O3' C B1916 -61.139 131.799 107.710 1.00 19.15 O
ATOM 2 P C B1917 -60.072 132.865 107.204 1.00 14.22 P
ATOM 3 OP1 C B1917 -60.667 134.209 107.423 1.00 14.22 O
ATOM 4 OP2 C B1917 -59.687 132.466 105.831 1.00 14.22 O
ATOM 5 O5' C B1917 -58.854 132.637 108.204 1.00 14.22 O
ATOM 6 C5' C B1917 -59.006 132.921 109.583 1.00 14.22 C
ATOM 7 C4' C B1917 -57.781 132.549 110.374 1.00 14.22 C
ATOM 8 O4' C B1917 -57.538 131.126 110.283 1.00 14.22 O
ATOM 9 C3' C B1917 -56.481 133.171 109.914 1.00 14.22 C
ATOM 10 O3' C B1917 -56.332 134.504 110.351 1.00 14.22 O
ATOM 11 C2' C B1917 -55.464 132.223 110.499 1.00 14.22 C
ATOM 12 O2' C B1917 -55.350 132.411 111.901 1.00 14.22 O
ATOM 13 C1' C B1917 -56.155 130.890 110.238 1.00 14.22 C
ATOM 14 N1 C B1917 -55.833 130.374 108.908 1.00 14.59 N
ATOM 15 C2 C B1917 -54.641 129.678 108.756 1.00 14.59 C
ATOM 16 O2 C B1917 -53.954 129.522 109.767 1.00 14.59 O
ATOM 17 N3 C B1917 -54.275 129.188 107.544 1.00 14.59 N
ATOM 18 C4 C B1917 -55.084 129.393 106.490 1.00 14.59 C
ATOM 19 N4 C B1917 -54.695 128.898 105.294 1.00 14.59 N
ATOM 20 C5 C B1917 -56.324 130.120 106.620 1.00 14.59 C
ATOM 21 C6 C B1917 -56.653 130.592 107.839 1.00 14.59 C
ATOM 22 P U B1918 -55.180 135.426 109.735 1.00 30.05 P
ATOM 23 OP1 U B1918 -55.658 136.829 109.765 1.00 30.05 O
ATOM 24 OP2 U B1918 -54.790 134.829 108.425 1.00 30.05 O
ATOM 25 O5' U B1918 -54.021 135.238 110.785 1.00 30.05 O
TER
Atoms:
OP1: (-46.216,126.936,105.362)
OP2: (-47.597,129.115,105.346)
C3': (-47.002,124.738,109.724)
C1': (-47.096,126.534,111.217)
C5': (-47.526,126.386,107.845)
O6: (-51.544,130.240,112.567)
O4': (-46.616,127.053,109.996)
C8: (-47.826,128.131,113.061)
C2: (-50.762,128.165,109.833)
C6: (-50.889,129.430,111.904)
C5: (-49.657,128.810,112.216)
C4: (-49.134,127.944,111.302)
P: (-46.705,128.158,106.070)
C4': (-46.609,126.004,108.989)
C2': (-47.846,125.261,110.856)
O2': (-47.945,124.390,111.955)
N1: (-51.370,129.040,110.669)
N2: (-51.396,127.921,108.687)
N3: (-49.624,127.571,110.102)
N7: (-48.821,128.925,113.318)
N9: (-47.952,127.533,111.841)
O5': (-47.372,127.754,107.466)
O3': (-45.847,124.141,110.261)
OP2: (-47.597,129.115,105.346)
C3': (-47.002,124.738,109.724)
C1': (-47.096,126.534,111.217)
C5': (-47.526,126.386,107.845)
O6: (-51.544,130.240,112.567)
O4': (-46.616,127.053,109.996)
C8: (-47.826,128.131,113.061)
C2: (-50.762,128.165,109.833)
C6: (-50.889,129.430,111.904)
C5: (-49.657,128.810,112.216)
C4: (-49.134,127.944,111.302)
P: (-46.705,128.158,106.070)
C4': (-46.609,126.004,108.989)
C2': (-47.846,125.261,110.856)
O2': (-47.945,124.390,111.955)
N1: (-51.370,129.040,110.669)
N2: (-51.396,127.921,108.687)
N3: (-49.624,127.571,110.102)
N7: (-48.821,128.925,113.318)
N9: (-47.952,127.533,111.841)
O5': (-47.372,127.754,107.466)
O3': (-45.847,124.141,110.261)
C2: (-54.641,129.678,108.756)
OP1: (-60.667,134.209,107.423)
OP2: (-59.687,132.466,105.831)
C4: (-55.084,129.393,106.490)
O5': (-58.854,132.637,108.204)
C3': (-56.481,133.171,109.914)
C1': (-56.155,130.890,110.238)
O4': (-57.538,131.126,110.283)
C5': (-59.006,132.921,109.583)
P: (-60.072,132.865,107.204)
O2: (-53.954,129.522,109.767)
C4': (-57.781,132.549,110.374)
C2': (-55.464,132.223,110.499)
O2': (-55.350,132.411,111.901)
N1: (-55.833,130.374,108.908)
N3: (-54.275,129.188,107.544)
N4: (-54.695,128.898,105.294)
C6: (-56.653,130.592,107.839)
C5: (-56.324,130.120,106.620)
O3': (-56.332,134.504,110.351)
OP1: (-60.667,134.209,107.423)
OP2: (-59.687,132.466,105.831)
C4: (-55.084,129.393,106.490)
O5': (-58.854,132.637,108.204)
C3': (-56.481,133.171,109.914)
C1': (-56.155,130.890,110.238)
O4': (-57.538,131.126,110.283)
C5': (-59.006,132.921,109.583)
P: (-60.072,132.865,107.204)
O2: (-53.954,129.522,109.767)
C4': (-57.781,132.549,110.374)
C2': (-55.464,132.223,110.499)
O2': (-55.350,132.411,111.901)
N1: (-55.833,130.374,108.908)
N3: (-54.275,129.188,107.544)
N4: (-54.695,128.898,105.294)
C6: (-56.653,130.592,107.839)
C5: (-56.324,130.120,106.620)
O3': (-56.332,134.504,110.351)
Image (generated by PyMOL):