Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2497:A2602
Extra
PDB:
ATOM 1 O3' U A2496 -44.049 121.438 169.673 1.00 1.61 O
ATOM 2 P G A2497 -42.835 122.287 169.057 1.00 1.24 P
ATOM 3 OP1 G A2497 -41.645 122.108 169.951 1.00 1.24 O
ATOM 4 OP2 G A2497 -43.357 123.670 168.825 1.00 1.24 O
ATOM 5 O5' G A2497 -42.600 121.550 167.658 1.00 1.24 O
ATOM 6 C5' G A2497 -43.347 120.384 167.328 1.00 1.24 C
ATOM 7 C4' G A2497 -43.161 119.976 165.891 1.00 1.24 C
ATOM 8 O4' G A2497 -41.786 120.177 165.492 1.00 1.24 O
ATOM 9 C3' G A2497 -43.414 118.510 165.570 1.00 1.24 C
ATOM 10 O3' G A2497 -44.787 118.197 165.480 1.00 1.24 O
ATOM 11 C2' G A2497 -42.666 118.349 164.265 1.00 1.24 C
ATOM 12 O2' G A2497 -43.386 118.940 163.203 1.00 1.24 O
ATOM 13 C1' G A2497 -41.428 119.201 164.541 1.00 1.24 C
ATOM 14 N9 G A2497 -40.348 118.408 165.105 1.00 1.06 N
ATOM 15 C8 G A2497 -40.285 117.996 166.392 1.00 1.06 C
ATOM 16 N7 G A2497 -39.227 117.295 166.641 1.00 1.06 N
ATOM 17 C5 G A2497 -38.581 117.258 165.431 1.00 1.06 C
ATOM 18 C6 G A2497 -37.376 116.641 165.113 1.00 1.06 C
ATOM 19 O6 G A2497 -36.651 116.001 165.871 1.00 1.06 O
ATOM 20 N1 G A2497 -37.058 116.839 163.783 1.00 1.06 N
ATOM 21 C2 G A2497 -37.810 117.534 162.887 1.00 1.06 C
ATOM 22 N2 G A2497 -37.304 117.589 161.653 1.00 1.06 N
ATOM 23 N3 G A2497 -38.952 118.127 163.174 1.00 1.06 N
ATOM 24 C4 G A2497 -39.255 117.945 164.468 1.00 1.06 C
ATOM 25 P U A2498 -45.277 116.782 164.908 1.00 20.67 P
ATOM 26 OP1 U A2498 -46.689 116.637 165.319 1.00 20.67 O
ATOM 27 OP2 U A2498 -44.308 115.773 165.354 1.00 20.67 O
ATOM 28 O5' U A2498 -45.190 116.963 163.321 1.00 20.67 O
TER
ATOM 1 O3' U B2601 -26.945 118.030 160.813 1.00 8.70 O
ATOM 2 P C B2602 -27.264 116.492 161.121 1.00 0.01 P
ATOM 3 OP1 C B2602 -26.276 116.043 162.101 1.00 0.01 O
ATOM 4 OP2 C B2602 -27.353 115.800 159.823 1.00 0.01 O
ATOM 5 O5' C B2602 -28.687 116.568 161.799 1.00 0.01 O
ATOM 6 C5' C B2602 -29.031 117.693 162.586 1.00 0.01 C
ATOM 7 C4' C B2602 -30.156 117.401 163.525 1.00 0.01 C
ATOM 8 O4' C B2602 -31.390 117.340 162.780 1.00 0.01 O
ATOM 9 C3' C B2602 -30.062 116.078 164.258 1.00 0.01 C
ATOM 10 O3' C B2602 -30.747 116.209 165.491 1.00 0.01 O
ATOM 11 C2' C B2602 -30.855 115.166 163.354 1.00 0.01 C
ATOM 12 O2' C B2602 -31.282 113.981 163.971 1.00 0.01 O
ATOM 13 C1' C B2602 -32.007 116.102 163.026 1.00 0.01 C
ATOM 14 N1 C B2602 -32.840 115.746 161.847 1.00 0.01 N
ATOM 15 C2 C B2602 -34.200 115.520 162.106 1.00 0.01 C
ATOM 16 O2 C B2602 -34.553 115.566 163.281 1.00 0.01 O
ATOM 17 N3 C B2602 -35.106 115.198 161.155 1.00 0.01 N
ATOM 18 C4 C B2602 -34.682 115.134 159.901 1.00 0.01 C
ATOM 19 N4 C B2602 -35.597 114.819 158.962 1.00 0.01 N
ATOM 20 C5 C B2602 -33.294 115.390 159.577 1.00 0.01 C
ATOM 21 C6 C B2602 -32.416 115.700 160.562 1.00 0.01 C
ATOM 22 P C B2603 -30.277 115.401 166.791 1.00 0.01 P
ATOM 23 OP1 C B2603 -29.163 114.503 166.404 1.00 0.01 O
ATOM 24 OP2 C B2603 -31.492 114.814 167.356 1.00 0.01 O
ATOM 25 O5' C B2603 -29.735 116.539 167.746 1.00 0.01 O
TER
ATOM 2 P G A2497 -42.835 122.287 169.057 1.00 1.24 P
ATOM 3 OP1 G A2497 -41.645 122.108 169.951 1.00 1.24 O
ATOM 4 OP2 G A2497 -43.357 123.670 168.825 1.00 1.24 O
ATOM 5 O5' G A2497 -42.600 121.550 167.658 1.00 1.24 O
ATOM 6 C5' G A2497 -43.347 120.384 167.328 1.00 1.24 C
ATOM 7 C4' G A2497 -43.161 119.976 165.891 1.00 1.24 C
ATOM 8 O4' G A2497 -41.786 120.177 165.492 1.00 1.24 O
ATOM 9 C3' G A2497 -43.414 118.510 165.570 1.00 1.24 C
ATOM 10 O3' G A2497 -44.787 118.197 165.480 1.00 1.24 O
ATOM 11 C2' G A2497 -42.666 118.349 164.265 1.00 1.24 C
ATOM 12 O2' G A2497 -43.386 118.940 163.203 1.00 1.24 O
ATOM 13 C1' G A2497 -41.428 119.201 164.541 1.00 1.24 C
ATOM 14 N9 G A2497 -40.348 118.408 165.105 1.00 1.06 N
ATOM 15 C8 G A2497 -40.285 117.996 166.392 1.00 1.06 C
ATOM 16 N7 G A2497 -39.227 117.295 166.641 1.00 1.06 N
ATOM 17 C5 G A2497 -38.581 117.258 165.431 1.00 1.06 C
ATOM 18 C6 G A2497 -37.376 116.641 165.113 1.00 1.06 C
ATOM 19 O6 G A2497 -36.651 116.001 165.871 1.00 1.06 O
ATOM 20 N1 G A2497 -37.058 116.839 163.783 1.00 1.06 N
ATOM 21 C2 G A2497 -37.810 117.534 162.887 1.00 1.06 C
ATOM 22 N2 G A2497 -37.304 117.589 161.653 1.00 1.06 N
ATOM 23 N3 G A2497 -38.952 118.127 163.174 1.00 1.06 N
ATOM 24 C4 G A2497 -39.255 117.945 164.468 1.00 1.06 C
ATOM 25 P U A2498 -45.277 116.782 164.908 1.00 20.67 P
ATOM 26 OP1 U A2498 -46.689 116.637 165.319 1.00 20.67 O
ATOM 27 OP2 U A2498 -44.308 115.773 165.354 1.00 20.67 O
ATOM 28 O5' U A2498 -45.190 116.963 163.321 1.00 20.67 O
TER
ATOM 1 O3' U B2601 -26.945 118.030 160.813 1.00 8.70 O
ATOM 2 P C B2602 -27.264 116.492 161.121 1.00 0.01 P
ATOM 3 OP1 C B2602 -26.276 116.043 162.101 1.00 0.01 O
ATOM 4 OP2 C B2602 -27.353 115.800 159.823 1.00 0.01 O
ATOM 5 O5' C B2602 -28.687 116.568 161.799 1.00 0.01 O
ATOM 6 C5' C B2602 -29.031 117.693 162.586 1.00 0.01 C
ATOM 7 C4' C B2602 -30.156 117.401 163.525 1.00 0.01 C
ATOM 8 O4' C B2602 -31.390 117.340 162.780 1.00 0.01 O
ATOM 9 C3' C B2602 -30.062 116.078 164.258 1.00 0.01 C
ATOM 10 O3' C B2602 -30.747 116.209 165.491 1.00 0.01 O
ATOM 11 C2' C B2602 -30.855 115.166 163.354 1.00 0.01 C
ATOM 12 O2' C B2602 -31.282 113.981 163.971 1.00 0.01 O
ATOM 13 C1' C B2602 -32.007 116.102 163.026 1.00 0.01 C
ATOM 14 N1 C B2602 -32.840 115.746 161.847 1.00 0.01 N
ATOM 15 C2 C B2602 -34.200 115.520 162.106 1.00 0.01 C
ATOM 16 O2 C B2602 -34.553 115.566 163.281 1.00 0.01 O
ATOM 17 N3 C B2602 -35.106 115.198 161.155 1.00 0.01 N
ATOM 18 C4 C B2602 -34.682 115.134 159.901 1.00 0.01 C
ATOM 19 N4 C B2602 -35.597 114.819 158.962 1.00 0.01 N
ATOM 20 C5 C B2602 -33.294 115.390 159.577 1.00 0.01 C
ATOM 21 C6 C B2602 -32.416 115.700 160.562 1.00 0.01 C
ATOM 22 P C B2603 -30.277 115.401 166.791 1.00 0.01 P
ATOM 23 OP1 C B2603 -29.163 114.503 166.404 1.00 0.01 O
ATOM 24 OP2 C B2603 -31.492 114.814 167.356 1.00 0.01 O
ATOM 25 O5' C B2603 -29.735 116.539 167.746 1.00 0.01 O
TER
Atoms:
OP1: (-41.645,122.108,169.951)
OP2: (-43.357,123.670,168.825)
C3': (-43.414,118.510,165.570)
C1': (-41.428,119.201,164.541)
C5': (-43.347,120.384,167.328)
O6: (-36.651,116.001,165.871)
O4': (-41.786,120.177,165.492)
C8: (-40.285,117.996,166.392)
C2: (-37.810,117.534,162.887)
C6: (-37.376,116.641,165.113)
C5: (-38.581,117.258,165.431)
C4: (-39.255,117.945,164.468)
P: (-42.835,122.287,169.057)
C4': (-43.161,119.976,165.891)
C2': (-42.666,118.349,164.265)
O2': (-43.386,118.940,163.203)
N1: (-37.058,116.839,163.783)
N2: (-37.304,117.589,161.653)
N3: (-38.952,118.127,163.174)
N7: (-39.227,117.295,166.641)
N9: (-40.348,118.408,165.105)
O5': (-42.600,121.550,167.658)
O3': (-44.787,118.197,165.480)
OP2: (-43.357,123.670,168.825)
C3': (-43.414,118.510,165.570)
C1': (-41.428,119.201,164.541)
C5': (-43.347,120.384,167.328)
O6: (-36.651,116.001,165.871)
O4': (-41.786,120.177,165.492)
C8: (-40.285,117.996,166.392)
C2: (-37.810,117.534,162.887)
C6: (-37.376,116.641,165.113)
C5: (-38.581,117.258,165.431)
C4: (-39.255,117.945,164.468)
P: (-42.835,122.287,169.057)
C4': (-43.161,119.976,165.891)
C2': (-42.666,118.349,164.265)
O2': (-43.386,118.940,163.203)
N1: (-37.058,116.839,163.783)
N2: (-37.304,117.589,161.653)
N3: (-38.952,118.127,163.174)
N7: (-39.227,117.295,166.641)
N9: (-40.348,118.408,165.105)
O5': (-42.600,121.550,167.658)
O3': (-44.787,118.197,165.480)
C2: (-34.200,115.520,162.106)
OP1: (-26.276,116.043,162.101)
OP2: (-27.353,115.800,159.823)
C4: (-34.682,115.134,159.901)
O5': (-28.687,116.568,161.799)
C3': (-30.062,116.078,164.258)
C1': (-32.007,116.102,163.026)
O4': (-31.390,117.340,162.780)
C5': (-29.031,117.693,162.586)
P: (-27.264,116.492,161.121)
O2: (-34.553,115.566,163.281)
C4': (-30.156,117.401,163.525)
C2': (-30.855,115.166,163.354)
O2': (-31.282,113.981,163.971)
N1: (-32.840,115.746,161.847)
N3: (-35.106,115.198,161.155)
N4: (-35.597,114.819,158.962)
C6: (-32.416,115.700,160.562)
C5: (-33.294,115.390,159.577)
O3': (-30.747,116.209,165.491)
OP1: (-26.276,116.043,162.101)
OP2: (-27.353,115.800,159.823)
C4: (-34.682,115.134,159.901)
O5': (-28.687,116.568,161.799)
C3': (-30.062,116.078,164.258)
C1': (-32.007,116.102,163.026)
O4': (-31.390,117.340,162.780)
C5': (-29.031,117.693,162.586)
P: (-27.264,116.492,161.121)
O2: (-34.553,115.566,163.281)
C4': (-30.156,117.401,163.525)
C2': (-30.855,115.166,163.354)
O2': (-31.282,113.981,163.971)
N1: (-32.840,115.746,161.847)
N3: (-35.106,115.198,161.155)
N4: (-35.597,114.819,158.962)
C6: (-32.416,115.700,160.562)
C5: (-33.294,115.390,159.577)
O3': (-30.747,116.209,165.491)
Image (generated by PyMOL):