Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:438:4105
Extra
PDB:
ATOM 1 O3' U A 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 2 P G A 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 3 OP1 G A 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 4 OP2 G A 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 5 O5' G A 38 59.305 -2.523 135.368 1.00 51.58 O
ATOM 6 C5' G A 38 59.573 -3.084 134.101 1.00 50.82 C
ATOM 7 C4' G A 38 58.546 -2.621 133.145 1.00 50.21 C
ATOM 8 O4' G A 38 57.248 -2.979 133.695 1.00 50.33 O
ATOM 9 C3' G A 38 58.529 -1.111 132.963 1.00 50.30 C
ATOM 10 O3' G A 38 58.168 -0.778 131.622 1.00 49.56 O
ATOM 11 C2' G A 38 57.451 -0.659 133.934 1.00 50.80 C
ATOM 12 O2' G A 38 56.812 0.530 133.571 1.00 50.70 O
ATOM 13 C1' G A 38 56.480 -1.824 133.917 1.00 50.53 C
ATOM 14 N9 G A 38 55.764 -1.982 135.173 1.00 51.16 N
ATOM 15 C8 G A 38 56.353 -1.829 136.406 1.00 51.96 C
ATOM 16 N7 G A 38 55.529 -1.979 137.398 1.00 52.46 N
ATOM 17 C5 G A 38 54.303 -2.208 136.772 1.00 51.96 C
ATOM 18 C6 G A 38 53.020 -2.436 137.330 1.00 52.17 C
ATOM 19 O6 G A 38 52.635 -2.496 138.496 1.00 52.85 O
ATOM 20 N1 G A 38 52.065 -2.630 136.367 1.00 51.52 N
ATOM 21 C2 G A 38 52.265 -2.615 135.040 1.00 50.75 C
ATOM 22 N2 G A 38 51.107 -2.853 134.409 1.00 50.30 N
ATOM 23 N3 G A 38 53.452 -2.408 134.457 1.00 50.51 N
ATOM 24 C4 G A 38 54.423 -2.220 135.386 1.00 51.15 C
ATOM 25 P A A 39 59.295 -0.268 130.594 1.00 46.64 P
ATOM 26 OP1 A A 39 60.537 -0.150 131.360 1.00 47.24 O
ATOM 27 OP2 A A 39 58.761 0.935 129.910 1.00 46.38 O
ATOM 28 O5' A A 39 59.413 -1.472 129.562 1.00 45.94 O
TER
ATOM 1 O3' A B 104 46.709 0.898 133.263 1.00 49.92 O
ATOM 2 P C B 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C B 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C B 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C B 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C B 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C B 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C B 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C B 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C B 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C B 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C B 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C B 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C B 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C B 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C B 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C B 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C B 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C B 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C B 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
TER
ATOM 2 P G A 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 3 OP1 G A 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 4 OP2 G A 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 5 O5' G A 38 59.305 -2.523 135.368 1.00 51.58 O
ATOM 6 C5' G A 38 59.573 -3.084 134.101 1.00 50.82 C
ATOM 7 C4' G A 38 58.546 -2.621 133.145 1.00 50.21 C
ATOM 8 O4' G A 38 57.248 -2.979 133.695 1.00 50.33 O
ATOM 9 C3' G A 38 58.529 -1.111 132.963 1.00 50.30 C
ATOM 10 O3' G A 38 58.168 -0.778 131.622 1.00 49.56 O
ATOM 11 C2' G A 38 57.451 -0.659 133.934 1.00 50.80 C
ATOM 12 O2' G A 38 56.812 0.530 133.571 1.00 50.70 O
ATOM 13 C1' G A 38 56.480 -1.824 133.917 1.00 50.53 C
ATOM 14 N9 G A 38 55.764 -1.982 135.173 1.00 51.16 N
ATOM 15 C8 G A 38 56.353 -1.829 136.406 1.00 51.96 C
ATOM 16 N7 G A 38 55.529 -1.979 137.398 1.00 52.46 N
ATOM 17 C5 G A 38 54.303 -2.208 136.772 1.00 51.96 C
ATOM 18 C6 G A 38 53.020 -2.436 137.330 1.00 52.17 C
ATOM 19 O6 G A 38 52.635 -2.496 138.496 1.00 52.85 O
ATOM 20 N1 G A 38 52.065 -2.630 136.367 1.00 51.52 N
ATOM 21 C2 G A 38 52.265 -2.615 135.040 1.00 50.75 C
ATOM 22 N2 G A 38 51.107 -2.853 134.409 1.00 50.30 N
ATOM 23 N3 G A 38 53.452 -2.408 134.457 1.00 50.51 N
ATOM 24 C4 G A 38 54.423 -2.220 135.386 1.00 51.15 C
ATOM 25 P A A 39 59.295 -0.268 130.594 1.00 46.64 P
ATOM 26 OP1 A A 39 60.537 -0.150 131.360 1.00 47.24 O
ATOM 27 OP2 A A 39 58.761 0.935 129.910 1.00 46.38 O
ATOM 28 O5' A A 39 59.413 -1.472 129.562 1.00 45.94 O
TER
ATOM 1 O3' A B 104 46.709 0.898 133.263 1.00 49.92 O
ATOM 2 P C B 105 45.192 1.115 133.750 1.00 50.30 P
ATOM 3 OP1 C B 105 44.286 0.466 132.764 1.00 49.65 O
ATOM 4 OP2 C B 105 45.026 2.590 134.015 1.00 50.70 O
ATOM 5 O5' C B 105 45.178 0.310 135.119 1.00 50.98 O
ATOM 6 C5' C B 105 44.477 0.824 136.242 1.00 51.74 C
ATOM 7 C4' C B 105 45.121 0.422 137.541 1.00 52.46 C
ATOM 8 O4' C B 105 45.425 -1.005 137.502 1.00 52.21 O
ATOM 9 C3' C B 105 46.431 1.121 137.854 1.00 52.75 C
ATOM 10 O3' C B 105 46.588 1.199 139.250 1.00 53.64 O
ATOM 11 C2' C B 105 47.448 0.151 137.308 1.00 52.26 C
ATOM 12 O2' C B 105 48.708 0.273 137.872 1.00 52.64 O
ATOM 13 C1' C B 105 46.815 -1.194 137.650 1.00 52.27 C
ATOM 14 N1 C B 105 47.235 -2.287 136.749 1.00 51.57 N
ATOM 15 C2 C B 105 48.554 -2.743 136.812 1.00 51.56 C
ATOM 16 O2 C B 105 49.342 -2.273 137.620 1.00 52.12 O
ATOM 17 N3 C B 105 48.972 -3.700 135.973 1.00 50.95 N
ATOM 18 C4 C B 105 48.119 -4.209 135.093 1.00 50.36 C
ATOM 19 N4 C B 105 48.579 -5.160 134.301 1.00 49.82 N
ATOM 20 C5 C B 105 46.783 -3.762 135.008 1.00 50.36 C
ATOM 21 C6 C B 105 46.382 -2.807 135.842 1.00 50.96 C
ATOM 22 P G B 106 46.570 2.624 139.976 1.00 55.93 P
ATOM 23 OP1 G B 106 46.772 3.643 138.923 1.00 55.45 O
ATOM 24 OP2 G B 106 47.540 2.550 141.130 1.00 56.66 O
ATOM 25 O5' G B 106 45.087 2.727 140.518 1.00 56.31 O
TER
Atoms:
OP1: (61.425,-1.252,135.494)
OP2: (59.841,-1.320,137.445)
C3': (58.529,-1.111,132.963)
C1': (56.480,-1.824,133.917)
C5': (59.573,-3.084,134.101)
O6: (52.635,-2.496,138.496)
O4': (57.248,-2.979,133.695)
C8: (56.353,-1.829,136.406)
C2: (52.265,-2.615,135.040)
C6: (53.020,-2.436,137.330)
C5: (54.303,-2.208,136.772)
C4: (54.423,-2.220,135.386)
P: (60.449,-1.983,136.289)
C4': (58.546,-2.621,133.145)
C2': (57.451,-0.659,133.934)
O2': (56.812,0.530,133.571)
N1: (52.065,-2.630,136.367)
N2: (51.107,-2.853,134.409)
N3: (53.452,-2.408,134.457)
N7: (55.529,-1.979,137.398)
N9: (55.764,-1.982,135.173)
O5': (59.305,-2.523,135.368)
O3': (58.168,-0.778,131.622)
OP2: (59.841,-1.320,137.445)
C3': (58.529,-1.111,132.963)
C1': (56.480,-1.824,133.917)
C5': (59.573,-3.084,134.101)
O6: (52.635,-2.496,138.496)
O4': (57.248,-2.979,133.695)
C8: (56.353,-1.829,136.406)
C2: (52.265,-2.615,135.040)
C6: (53.020,-2.436,137.330)
C5: (54.303,-2.208,136.772)
C4: (54.423,-2.220,135.386)
P: (60.449,-1.983,136.289)
C4': (58.546,-2.621,133.145)
C2': (57.451,-0.659,133.934)
O2': (56.812,0.530,133.571)
N1: (52.065,-2.630,136.367)
N2: (51.107,-2.853,134.409)
N3: (53.452,-2.408,134.457)
N7: (55.529,-1.979,137.398)
N9: (55.764,-1.982,135.173)
O5': (59.305,-2.523,135.368)
O3': (58.168,-0.778,131.622)
C2: (48.554,-2.743,136.812)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
OP1: (44.286,0.466,132.764)
OP2: (45.026,2.590,134.015)
C4: (48.119,-4.209,135.093)
O5': (45.178,0.310,135.119)
C3': (46.431,1.121,137.854)
C1': (46.815,-1.194,137.650)
O4': (45.425,-1.005,137.502)
C5': (44.477,0.824,136.242)
P: (45.192,1.115,133.750)
O2: (49.342,-2.273,137.620)
C4': (45.121,0.422,137.541)
C2': (47.448,0.151,137.308)
O2': (48.708,0.273,137.872)
N1: (47.235,-2.287,136.749)
N3: (48.972,-3.700,135.973)
N4: (48.579,-5.160,134.301)
C6: (46.382,-2.807,135.842)
C5: (46.783,-3.762,135.008)
O3': (46.588,1.199,139.250)
Image (generated by PyMOL):