Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A499:A514
Extra
PDB:
ATOM 1 O3' A A 498 -58.307 69.070 101.871 1.00 44.83 O
ATOM 2 P G A 499 -56.731 68.883 102.105 1.00 39.23 P
ATOM 3 OP1 G A 499 -56.551 67.999 103.291 1.00 52.00 O
ATOM 4 OP2 G A 499 -56.094 70.224 102.083 1.00 51.07 O
ATOM 5 O5' G A 499 -56.262 68.106 100.795 1.00 39.97 O
ATOM 6 C5' G A 499 -55.052 68.470 100.114 1.00 37.54 C
ATOM 7 C4' G A 499 -55.085 67.963 98.697 1.00 34.68 C
ATOM 8 O4' G A 499 -56.080 68.694 97.926 1.00 33.67 O
ATOM 9 C3' G A 499 -53.801 68.154 97.914 1.00 33.74 C
ATOM 10 O3' G A 499 -52.868 67.123 98.217 1.00 33.02 O
ATOM 11 C2' G A 499 -54.295 68.109 96.473 1.00 32.89 C
ATOM 12 O2' G A 499 -54.520 66.790 96.027 1.00 32.81 O
ATOM 13 C1' G A 499 -55.647 68.817 96.581 1.00 32.07 C
ATOM 14 N9 G A 499 -55.517 70.232 96.252 1.00 47.66 N
ATOM 15 C8 G A 499 -55.587 71.293 97.114 1.00 48.09 C
ATOM 16 N7 G A 499 -55.371 72.441 96.532 1.00 46.61 N
ATOM 17 C5 G A 499 -55.155 72.119 95.203 1.00 45.30 C
ATOM 18 C6 G A 499 -54.867 72.951 94.094 1.00 44.70 C
ATOM 19 O6 G A 499 -54.732 74.177 94.065 1.00 43.70 O
ATOM 20 N1 G A 499 -54.735 72.216 92.924 1.00 44.37 N
ATOM 21 C2 G A 499 -54.861 70.856 92.831 1.00 45.26 C
ATOM 22 N2 G A 499 -54.703 70.337 91.611 1.00 46.04 N
ATOM 23 N3 G A 499 -55.124 70.065 93.860 1.00 45.61 N
ATOM 24 C4 G A 499 -55.258 70.762 95.008 1.00 46.49 C
ATOM 25 P C A 500 -51.312 67.325 97.865 1.00 19.36 P
ATOM 26 OP1 C A 500 -50.557 66.133 98.346 1.00 34.29 O
ATOM 27 OP2 C A 500 -50.889 68.684 98.282 1.00 32.80 O
ATOM 28 O5' C A 500 -51.290 67.317 96.277 1.00 22.84 O
TER
ATOM 1 O3' A B 513 -54.138 66.482 87.442 1.00 19.90 O
ATOM 2 P C B 514 -54.368 65.255 88.446 1.00 38.95 P
ATOM 3 OP1 C B 514 -53.007 64.791 88.829 1.00 51.01 O
ATOM 4 OP2 C B 514 -55.330 64.297 87.837 1.00 51.49 O
ATOM 5 O5' C B 514 -55.079 65.924 89.706 1.00 6.40 O
ATOM 6 C5' C B 514 -54.317 66.624 90.727 1.00 6.40 C
ATOM 7 C4' C B 514 -55.181 66.839 91.947 1.00 7.07 C
ATOM 8 O4' C B 514 -56.246 67.741 91.596 1.00 7.22 O
ATOM 9 C3' C B 514 -55.851 65.554 92.390 1.00 8.19 C
ATOM 10 O3' C B 514 -55.072 64.965 93.419 1.00 9.37 O
ATOM 11 C2' C B 514 -57.204 65.999 92.916 1.00 8.70 C
ATOM 12 O2' C B 514 -57.151 66.326 94.288 1.00 9.16 O
ATOM 13 C1' C B 514 -57.474 67.249 92.078 1.00 8.97 C
ATOM 14 N1 C B 514 -58.359 67.060 90.922 1.00 12.20 N
ATOM 15 C2 C B 514 -59.721 66.861 91.134 1.00 12.97 C
ATOM 16 O2 C B 514 -60.135 66.780 92.284 1.00 14.54 O
ATOM 17 N3 C B 514 -60.550 66.755 90.074 1.00 12.43 N
ATOM 18 C4 C B 514 -60.054 66.825 88.834 1.00 11.48 C
ATOM 19 N4 C B 514 -60.903 66.740 87.805 1.00 10.66 N
ATOM 20 C5 C B 514 -58.662 66.991 88.590 1.00 12.36 C
ATOM 21 C6 C B 514 -57.859 67.104 89.651 1.00 12.59 C
ATOM 22 P G B 515 -54.859 63.386 93.441 1.00 31.30 P
ATOM 23 OP1 G B 515 -53.991 63.118 94.612 1.00 11.85 O
ATOM 24 OP2 G B 515 -54.413 62.972 92.075 1.00 13.42 O
ATOM 25 O5' G B 515 -56.320 62.830 93.745 1.00 23.88 O
TER
ATOM 2 P G A 499 -56.731 68.883 102.105 1.00 39.23 P
ATOM 3 OP1 G A 499 -56.551 67.999 103.291 1.00 52.00 O
ATOM 4 OP2 G A 499 -56.094 70.224 102.083 1.00 51.07 O
ATOM 5 O5' G A 499 -56.262 68.106 100.795 1.00 39.97 O
ATOM 6 C5' G A 499 -55.052 68.470 100.114 1.00 37.54 C
ATOM 7 C4' G A 499 -55.085 67.963 98.697 1.00 34.68 C
ATOM 8 O4' G A 499 -56.080 68.694 97.926 1.00 33.67 O
ATOM 9 C3' G A 499 -53.801 68.154 97.914 1.00 33.74 C
ATOM 10 O3' G A 499 -52.868 67.123 98.217 1.00 33.02 O
ATOM 11 C2' G A 499 -54.295 68.109 96.473 1.00 32.89 C
ATOM 12 O2' G A 499 -54.520 66.790 96.027 1.00 32.81 O
ATOM 13 C1' G A 499 -55.647 68.817 96.581 1.00 32.07 C
ATOM 14 N9 G A 499 -55.517 70.232 96.252 1.00 47.66 N
ATOM 15 C8 G A 499 -55.587 71.293 97.114 1.00 48.09 C
ATOM 16 N7 G A 499 -55.371 72.441 96.532 1.00 46.61 N
ATOM 17 C5 G A 499 -55.155 72.119 95.203 1.00 45.30 C
ATOM 18 C6 G A 499 -54.867 72.951 94.094 1.00 44.70 C
ATOM 19 O6 G A 499 -54.732 74.177 94.065 1.00 43.70 O
ATOM 20 N1 G A 499 -54.735 72.216 92.924 1.00 44.37 N
ATOM 21 C2 G A 499 -54.861 70.856 92.831 1.00 45.26 C
ATOM 22 N2 G A 499 -54.703 70.337 91.611 1.00 46.04 N
ATOM 23 N3 G A 499 -55.124 70.065 93.860 1.00 45.61 N
ATOM 24 C4 G A 499 -55.258 70.762 95.008 1.00 46.49 C
ATOM 25 P C A 500 -51.312 67.325 97.865 1.00 19.36 P
ATOM 26 OP1 C A 500 -50.557 66.133 98.346 1.00 34.29 O
ATOM 27 OP2 C A 500 -50.889 68.684 98.282 1.00 32.80 O
ATOM 28 O5' C A 500 -51.290 67.317 96.277 1.00 22.84 O
TER
ATOM 1 O3' A B 513 -54.138 66.482 87.442 1.00 19.90 O
ATOM 2 P C B 514 -54.368 65.255 88.446 1.00 38.95 P
ATOM 3 OP1 C B 514 -53.007 64.791 88.829 1.00 51.01 O
ATOM 4 OP2 C B 514 -55.330 64.297 87.837 1.00 51.49 O
ATOM 5 O5' C B 514 -55.079 65.924 89.706 1.00 6.40 O
ATOM 6 C5' C B 514 -54.317 66.624 90.727 1.00 6.40 C
ATOM 7 C4' C B 514 -55.181 66.839 91.947 1.00 7.07 C
ATOM 8 O4' C B 514 -56.246 67.741 91.596 1.00 7.22 O
ATOM 9 C3' C B 514 -55.851 65.554 92.390 1.00 8.19 C
ATOM 10 O3' C B 514 -55.072 64.965 93.419 1.00 9.37 O
ATOM 11 C2' C B 514 -57.204 65.999 92.916 1.00 8.70 C
ATOM 12 O2' C B 514 -57.151 66.326 94.288 1.00 9.16 O
ATOM 13 C1' C B 514 -57.474 67.249 92.078 1.00 8.97 C
ATOM 14 N1 C B 514 -58.359 67.060 90.922 1.00 12.20 N
ATOM 15 C2 C B 514 -59.721 66.861 91.134 1.00 12.97 C
ATOM 16 O2 C B 514 -60.135 66.780 92.284 1.00 14.54 O
ATOM 17 N3 C B 514 -60.550 66.755 90.074 1.00 12.43 N
ATOM 18 C4 C B 514 -60.054 66.825 88.834 1.00 11.48 C
ATOM 19 N4 C B 514 -60.903 66.740 87.805 1.00 10.66 N
ATOM 20 C5 C B 514 -58.662 66.991 88.590 1.00 12.36 C
ATOM 21 C6 C B 514 -57.859 67.104 89.651 1.00 12.59 C
ATOM 22 P G B 515 -54.859 63.386 93.441 1.00 31.30 P
ATOM 23 OP1 G B 515 -53.991 63.118 94.612 1.00 11.85 O
ATOM 24 OP2 G B 515 -54.413 62.972 92.075 1.00 13.42 O
ATOM 25 O5' G B 515 -56.320 62.830 93.745 1.00 23.88 O
TER
Atoms:
OP1: (-56.551,67.999,103.291)
OP2: (-56.094,70.224,102.083)
C3': (-53.801,68.154,97.914)
C1': (-55.647,68.817,96.581)
C5': (-55.052,68.470,100.114)
O6: (-54.732,74.177,94.065)
O4': (-56.080,68.694,97.926)
C8: (-55.587,71.293,97.114)
C2: (-54.861,70.856,92.831)
C6: (-54.867,72.951,94.094)
C5: (-55.155,72.119,95.203)
C4: (-55.258,70.762,95.008)
P: (-56.731,68.883,102.105)
C4': (-55.085,67.963,98.697)
C2': (-54.295,68.109,96.473)
O2': (-54.520,66.790,96.027)
N1: (-54.735,72.216,92.924)
N2: (-54.703,70.337,91.611)
N3: (-55.124,70.065,93.860)
N7: (-55.371,72.441,96.532)
N9: (-55.517,70.232,96.252)
O5': (-56.262,68.106,100.795)
O3': (-52.868,67.123,98.217)
OP2: (-56.094,70.224,102.083)
C3': (-53.801,68.154,97.914)
C1': (-55.647,68.817,96.581)
C5': (-55.052,68.470,100.114)
O6: (-54.732,74.177,94.065)
O4': (-56.080,68.694,97.926)
C8: (-55.587,71.293,97.114)
C2: (-54.861,70.856,92.831)
C6: (-54.867,72.951,94.094)
C5: (-55.155,72.119,95.203)
C4: (-55.258,70.762,95.008)
P: (-56.731,68.883,102.105)
C4': (-55.085,67.963,98.697)
C2': (-54.295,68.109,96.473)
O2': (-54.520,66.790,96.027)
N1: (-54.735,72.216,92.924)
N2: (-54.703,70.337,91.611)
N3: (-55.124,70.065,93.860)
N7: (-55.371,72.441,96.532)
N9: (-55.517,70.232,96.252)
O5': (-56.262,68.106,100.795)
O3': (-52.868,67.123,98.217)
C2: (-59.721,66.861,91.134)
OP1: (-53.007,64.791,88.829)
OP2: (-55.330,64.297,87.837)
C4: (-60.054,66.825,88.834)
O5': (-55.079,65.924,89.706)
C3': (-55.851,65.554,92.390)
C1': (-57.474,67.249,92.078)
O4': (-56.246,67.741,91.596)
C5': (-54.317,66.624,90.727)
P: (-54.368,65.255,88.446)
O2: (-60.135,66.780,92.284)
C4': (-55.181,66.839,91.947)
C2': (-57.204,65.999,92.916)
O2': (-57.151,66.326,94.288)
N1: (-58.359,67.060,90.922)
N3: (-60.550,66.755,90.074)
N4: (-60.903,66.740,87.805)
C6: (-57.859,67.104,89.651)
C5: (-58.662,66.991,88.590)
O3': (-55.072,64.965,93.419)
OP1: (-53.007,64.791,88.829)
OP2: (-55.330,64.297,87.837)
C4: (-60.054,66.825,88.834)
O5': (-55.079,65.924,89.706)
C3': (-55.851,65.554,92.390)
C1': (-57.474,67.249,92.078)
O4': (-56.246,67.741,91.596)
C5': (-54.317,66.624,90.727)
P: (-54.368,65.255,88.446)
O2: (-60.135,66.780,92.284)
C4': (-55.181,66.839,91.947)
C2': (-57.204,65.999,92.916)
O2': (-57.151,66.326,94.288)
N1: (-58.359,67.060,90.922)
N3: (-60.550,66.755,90.074)
N4: (-60.903,66.740,87.805)
C6: (-57.859,67.104,89.651)
C5: (-58.662,66.991,88.590)
O3': (-55.072,64.965,93.419)
Image (generated by PyMOL):