Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A6:A503
Extra
PDB:
ATOM 1 O3' A A 5 -38.942 71.538 72.339 1.00 18.65 O
ATOM 2 P G A 6 -39.377 73.066 72.565 1.00 21.94 P
ATOM 3 OP1 G A 6 -40.602 73.315 71.754 1.00 45.39 O
ATOM 4 OP2 G A 6 -38.166 73.915 72.353 1.00 43.98 O
ATOM 5 O5' G A 6 -39.790 73.094 74.102 1.00 31.75 O
ATOM 6 C5' G A 6 -40.960 72.393 74.564 1.00 30.57 C
ATOM 7 C4' G A 6 -41.160 72.623 76.047 1.00 29.54 C
ATOM 8 O4' G A 6 -40.043 72.049 76.768 1.00 28.96 O
ATOM 9 C3' G A 6 -41.181 74.078 76.495 1.00 29.35 C
ATOM 10 O3' G A 6 -42.453 74.693 76.368 1.00 30.67 O
ATOM 11 C2' G A 6 -40.738 73.998 77.947 1.00 28.96 C
ATOM 12 O2' G A 6 -41.787 73.658 78.825 1.00 29.57 O
ATOM 13 C1' G A 6 -39.728 72.856 77.896 1.00 28.85 C
ATOM 14 N9 G A 6 -38.356 73.341 77.758 1.00 29.12 N
ATOM 15 C8 G A 6 -37.567 73.291 76.634 1.00 29.29 C
ATOM 16 N7 G A 6 -36.373 73.785 76.823 1.00 29.80 N
ATOM 17 C5 G A 6 -36.373 74.189 78.151 1.00 28.73 C
ATOM 18 C6 G A 6 -35.352 74.792 78.923 1.00 28.96 C
ATOM 19 O6 G A 6 -34.206 75.094 78.581 1.00 31.30 O
ATOM 20 N1 G A 6 -35.776 75.046 80.217 1.00 28.01 N
ATOM 21 C2 G A 6 -37.023 74.761 80.709 1.00 27.74 C
ATOM 22 N2 G A 6 -37.250 75.105 81.986 1.00 26.92 N
ATOM 23 N3 G A 6 -37.982 74.186 80.002 1.00 28.69 N
ATOM 24 C4 G A 6 -37.591 73.931 78.740 1.00 28.48 C
ATOM 25 P U A 7 -42.535 76.239 75.926 1.00 10.83 P
ATOM 26 OP1 U A 7 -43.981 76.573 75.772 1.00 28.57 O
ATOM 27 OP2 U A 7 -41.585 76.464 74.796 1.00 26.13 O
ATOM 28 O5' U A 7 -41.977 77.020 77.193 1.00 33.18 O
TER
ATOM 1 O3' G B 502 -39.514 71.018 89.779 1.00 18.26 O
ATOM 2 P C B 503 -40.509 72.267 89.979 1.00 26.31 P
ATOM 3 OP1 C B 503 -39.893 73.074 91.057 1.00 37.76 O
ATOM 4 OP2 C B 503 -41.909 71.795 90.123 1.00 36.28 O
ATOM 5 O5' C B 503 -40.374 73.095 88.630 1.00 10.31 O
ATOM 6 C5' C B 503 -39.149 73.787 88.333 1.00 10.31 C
ATOM 7 C4' C B 503 -39.135 74.228 86.891 1.00 10.31 C
ATOM 8 O4' C B 503 -38.988 73.067 86.030 1.00 10.31 O
ATOM 9 C3' C B 503 -40.411 74.902 86.418 1.00 10.31 C
ATOM 10 O3' C B 503 -40.449 76.284 86.706 1.00 10.31 O
ATOM 11 C2' C B 503 -40.407 74.629 84.923 1.00 10.31 C
ATOM 12 O2' C B 503 -39.625 75.570 84.198 1.00 10.31 O
ATOM 13 C1' C B 503 -39.803 73.219 84.875 1.00 10.31 C
ATOM 14 N1 C B 503 -40.851 72.181 84.931 1.00 25.42 N
ATOM 15 C2 C B 503 -41.649 71.962 83.811 1.00 25.17 C
ATOM 16 O2 C B 503 -41.427 72.617 82.779 1.00 27.36 O
ATOM 17 N3 C B 503 -42.643 71.047 83.879 1.00 25.08 N
ATOM 18 C4 C B 503 -42.841 70.364 85.009 1.00 25.51 C
ATOM 19 N4 C B 503 -43.843 69.488 85.049 1.00 25.96 N
ATOM 20 C5 C B 503 -42.024 70.553 86.154 1.00 26.42 C
ATOM 21 C6 C B 503 -41.053 71.458 86.072 1.00 26.12 C
ATOM 22 P C B 504 -41.865 76.982 86.962 1.00 57.92 P
ATOM 23 OP1 C B 504 -41.599 78.412 87.244 1.00 71.67 O
ATOM 24 OP2 C B 504 -42.627 76.165 87.946 1.00 67.56 O
ATOM 25 O5' C B 504 -42.597 76.859 85.555 1.00 25.89 O
TER
ATOM 2 P G A 6 -39.377 73.066 72.565 1.00 21.94 P
ATOM 3 OP1 G A 6 -40.602 73.315 71.754 1.00 45.39 O
ATOM 4 OP2 G A 6 -38.166 73.915 72.353 1.00 43.98 O
ATOM 5 O5' G A 6 -39.790 73.094 74.102 1.00 31.75 O
ATOM 6 C5' G A 6 -40.960 72.393 74.564 1.00 30.57 C
ATOM 7 C4' G A 6 -41.160 72.623 76.047 1.00 29.54 C
ATOM 8 O4' G A 6 -40.043 72.049 76.768 1.00 28.96 O
ATOM 9 C3' G A 6 -41.181 74.078 76.495 1.00 29.35 C
ATOM 10 O3' G A 6 -42.453 74.693 76.368 1.00 30.67 O
ATOM 11 C2' G A 6 -40.738 73.998 77.947 1.00 28.96 C
ATOM 12 O2' G A 6 -41.787 73.658 78.825 1.00 29.57 O
ATOM 13 C1' G A 6 -39.728 72.856 77.896 1.00 28.85 C
ATOM 14 N9 G A 6 -38.356 73.341 77.758 1.00 29.12 N
ATOM 15 C8 G A 6 -37.567 73.291 76.634 1.00 29.29 C
ATOM 16 N7 G A 6 -36.373 73.785 76.823 1.00 29.80 N
ATOM 17 C5 G A 6 -36.373 74.189 78.151 1.00 28.73 C
ATOM 18 C6 G A 6 -35.352 74.792 78.923 1.00 28.96 C
ATOM 19 O6 G A 6 -34.206 75.094 78.581 1.00 31.30 O
ATOM 20 N1 G A 6 -35.776 75.046 80.217 1.00 28.01 N
ATOM 21 C2 G A 6 -37.023 74.761 80.709 1.00 27.74 C
ATOM 22 N2 G A 6 -37.250 75.105 81.986 1.00 26.92 N
ATOM 23 N3 G A 6 -37.982 74.186 80.002 1.00 28.69 N
ATOM 24 C4 G A 6 -37.591 73.931 78.740 1.00 28.48 C
ATOM 25 P U A 7 -42.535 76.239 75.926 1.00 10.83 P
ATOM 26 OP1 U A 7 -43.981 76.573 75.772 1.00 28.57 O
ATOM 27 OP2 U A 7 -41.585 76.464 74.796 1.00 26.13 O
ATOM 28 O5' U A 7 -41.977 77.020 77.193 1.00 33.18 O
TER
ATOM 1 O3' G B 502 -39.514 71.018 89.779 1.00 18.26 O
ATOM 2 P C B 503 -40.509 72.267 89.979 1.00 26.31 P
ATOM 3 OP1 C B 503 -39.893 73.074 91.057 1.00 37.76 O
ATOM 4 OP2 C B 503 -41.909 71.795 90.123 1.00 36.28 O
ATOM 5 O5' C B 503 -40.374 73.095 88.630 1.00 10.31 O
ATOM 6 C5' C B 503 -39.149 73.787 88.333 1.00 10.31 C
ATOM 7 C4' C B 503 -39.135 74.228 86.891 1.00 10.31 C
ATOM 8 O4' C B 503 -38.988 73.067 86.030 1.00 10.31 O
ATOM 9 C3' C B 503 -40.411 74.902 86.418 1.00 10.31 C
ATOM 10 O3' C B 503 -40.449 76.284 86.706 1.00 10.31 O
ATOM 11 C2' C B 503 -40.407 74.629 84.923 1.00 10.31 C
ATOM 12 O2' C B 503 -39.625 75.570 84.198 1.00 10.31 O
ATOM 13 C1' C B 503 -39.803 73.219 84.875 1.00 10.31 C
ATOM 14 N1 C B 503 -40.851 72.181 84.931 1.00 25.42 N
ATOM 15 C2 C B 503 -41.649 71.962 83.811 1.00 25.17 C
ATOM 16 O2 C B 503 -41.427 72.617 82.779 1.00 27.36 O
ATOM 17 N3 C B 503 -42.643 71.047 83.879 1.00 25.08 N
ATOM 18 C4 C B 503 -42.841 70.364 85.009 1.00 25.51 C
ATOM 19 N4 C B 503 -43.843 69.488 85.049 1.00 25.96 N
ATOM 20 C5 C B 503 -42.024 70.553 86.154 1.00 26.42 C
ATOM 21 C6 C B 503 -41.053 71.458 86.072 1.00 26.12 C
ATOM 22 P C B 504 -41.865 76.982 86.962 1.00 57.92 P
ATOM 23 OP1 C B 504 -41.599 78.412 87.244 1.00 71.67 O
ATOM 24 OP2 C B 504 -42.627 76.165 87.946 1.00 67.56 O
ATOM 25 O5' C B 504 -42.597 76.859 85.555 1.00 25.89 O
TER
Atoms:
OP1: (-40.602,73.315,71.754)
OP2: (-38.166,73.915,72.353)
C3': (-41.181,74.078,76.495)
C1': (-39.728,72.856,77.896)
C5': (-40.960,72.393,74.564)
O6: (-34.206,75.094,78.581)
O4': (-40.043,72.049,76.768)
C8: (-37.567,73.291,76.634)
C2: (-37.023,74.761,80.709)
C6: (-35.352,74.792,78.923)
C5: (-36.373,74.189,78.151)
C4: (-37.591,73.931,78.740)
P: (-39.377,73.066,72.565)
C4': (-41.160,72.623,76.047)
C2': (-40.738,73.998,77.947)
O2': (-41.787,73.658,78.825)
N1: (-35.776,75.046,80.217)
N2: (-37.250,75.105,81.986)
N3: (-37.982,74.186,80.002)
N7: (-36.373,73.785,76.823)
N9: (-38.356,73.341,77.758)
O5': (-39.790,73.094,74.102)
O3': (-42.453,74.693,76.368)
OP2: (-38.166,73.915,72.353)
C3': (-41.181,74.078,76.495)
C1': (-39.728,72.856,77.896)
C5': (-40.960,72.393,74.564)
O6: (-34.206,75.094,78.581)
O4': (-40.043,72.049,76.768)
C8: (-37.567,73.291,76.634)
C2: (-37.023,74.761,80.709)
C6: (-35.352,74.792,78.923)
C5: (-36.373,74.189,78.151)
C4: (-37.591,73.931,78.740)
P: (-39.377,73.066,72.565)
C4': (-41.160,72.623,76.047)
C2': (-40.738,73.998,77.947)
O2': (-41.787,73.658,78.825)
N1: (-35.776,75.046,80.217)
N2: (-37.250,75.105,81.986)
N3: (-37.982,74.186,80.002)
N7: (-36.373,73.785,76.823)
N9: (-38.356,73.341,77.758)
O5': (-39.790,73.094,74.102)
O3': (-42.453,74.693,76.368)
C2: (-41.649,71.962,83.811)
OP1: (-39.893,73.074,91.057)
OP2: (-41.909,71.795,90.123)
C4: (-42.841,70.364,85.009)
O5': (-40.374,73.095,88.630)
C3': (-40.411,74.902,86.418)
C1': (-39.803,73.219,84.875)
O4': (-38.988,73.067,86.030)
C5': (-39.149,73.787,88.333)
P: (-40.509,72.267,89.979)
O2: (-41.427,72.617,82.779)
C4': (-39.135,74.228,86.891)
C2': (-40.407,74.629,84.923)
O2': (-39.625,75.570,84.198)
N1: (-40.851,72.181,84.931)
N3: (-42.643,71.047,83.879)
N4: (-43.843,69.488,85.049)
C6: (-41.053,71.458,86.072)
C5: (-42.024,70.553,86.154)
O3': (-40.449,76.284,86.706)
OP1: (-39.893,73.074,91.057)
OP2: (-41.909,71.795,90.123)
C4: (-42.841,70.364,85.009)
O5': (-40.374,73.095,88.630)
C3': (-40.411,74.902,86.418)
C1': (-39.803,73.219,84.875)
O4': (-38.988,73.067,86.030)
C5': (-39.149,73.787,88.333)
P: (-40.509,72.267,89.979)
O2: (-41.427,72.617,82.779)
C4': (-39.135,74.228,86.891)
C2': (-40.407,74.629,84.923)
O2': (-39.625,75.570,84.198)
N1: (-40.851,72.181,84.931)
N3: (-42.643,71.047,83.879)
N4: (-43.843,69.488,85.049)
C6: (-41.053,71.458,86.072)
C5: (-42.024,70.553,86.154)
O3': (-40.449,76.284,86.706)
Image (generated by PyMOL):