Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2128:A1980
Extra
PDB:
ATOM 1 O3' G A2127 -103.333 -53.833 14.805 1.00 18.10 O
ATOM 2 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 3 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 4 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 5 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
ATOM 6 C5' G A2128 -100.615 -54.058 15.982 1.00 0.79 C
ATOM 7 C4' G A2128 -99.178 -53.925 16.432 1.00 0.79 C
ATOM 8 O4' G A2128 -98.308 -53.932 15.266 1.00 0.79 O
ATOM 9 C3' G A2128 -98.816 -52.650 17.172 1.00 0.79 C
ATOM 10 O3' G A2128 -99.120 -52.737 18.556 1.00 0.79 O
ATOM 11 C2' G A2128 -97.321 -52.560 16.918 1.00 0.79 C
ATOM 12 O2' G A2128 -96.612 -53.451 17.759 1.00 0.79 O
ATOM 13 C1' G A2128 -97.222 -53.045 15.468 1.00 0.79 C
ATOM 14 N9 G A2128 -97.372 -51.954 14.507 1.00 8.46 N
ATOM 15 C8 G A2128 -98.492 -51.683 13.766 1.00 8.46 C
ATOM 16 N7 G A2128 -98.364 -50.632 13.007 1.00 8.46 N
ATOM 17 C5 G A2128 -97.082 -50.184 13.255 1.00 8.46 C
ATOM 18 C6 G A2128 -96.381 -49.083 12.713 1.00 8.46 C
ATOM 19 O6 G A2128 -96.765 -48.259 11.874 1.00 8.46 O
ATOM 20 N1 G A2128 -95.102 -48.985 13.236 1.00 8.46 N
ATOM 21 C2 G A2128 -94.569 -49.837 14.153 1.00 8.46 C
ATOM 22 N2 G A2128 -93.325 -49.562 14.532 1.00 8.46 N
ATOM 23 N3 G A2128 -95.209 -50.879 14.662 1.00 8.46 N
ATOM 24 C4 G A2128 -96.452 -50.990 14.174 1.00 8.46 C
ATOM 25 P G A2129 -99.977 -51.564 19.266 1.00 7.59 P
ATOM 26 OP1 G A2129 -100.407 -52.008 20.615 1.00 18.97 O
ATOM 27 OP2 G A2129 -101.000 -51.095 18.302 1.00 18.97 O
ATOM 28 O5' G A2129 -98.916 -50.401 19.456 1.00 4.26 O
TER
ATOM 1 O3' C B1979 -85.142 -48.967 14.383 1.00 9.65 O
ATOM 2 P C B1980 -85.985 -48.598 15.686 1.00 30.46 P
ATOM 3 OP1 C B1980 -86.386 -47.186 15.494 1.00 36.83 O
ATOM 4 OP2 C B1980 -85.196 -48.985 16.880 1.00 36.83 O
ATOM 5 O5' C B1980 -87.259 -49.555 15.620 1.00 7.43 O
ATOM 6 C5' C B1980 -88.363 -49.275 14.733 1.00 7.43 C
ATOM 7 C4' C B1980 -89.459 -50.303 14.908 1.00 7.43 C
ATOM 8 O4' C B1980 -89.031 -51.576 14.370 1.00 7.43 O
ATOM 9 C3' C B1980 -89.852 -50.615 16.338 1.00 7.43 C
ATOM 10 O3' C B1980 -90.772 -49.659 16.829 1.00 7.43 O
ATOM 11 C2' C B1980 -90.438 -52.020 16.235 1.00 7.43 C
ATOM 12 O2' C B1980 -91.770 -52.046 15.789 1.00 7.43 O
ATOM 13 C1' C B1980 -89.580 -52.636 15.136 1.00 7.43 C
ATOM 14 N1 C B1980 -88.491 -53.491 15.656 1.00 10.05 N
ATOM 15 C2 C B1980 -88.818 -54.771 16.101 1.00 10.05 C
ATOM 16 O2 C B1980 -90.008 -55.143 16.021 1.00 10.05 O
ATOM 17 N3 C B1980 -87.835 -55.574 16.602 1.00 10.05 N
ATOM 18 C4 C B1980 -86.576 -55.135 16.656 1.00 10.05 C
ATOM 19 N4 C B1980 -85.646 -55.949 17.158 1.00 10.05 N
ATOM 20 C5 C B1980 -86.214 -53.835 16.197 1.00 10.05 C
ATOM 21 C6 C B1980 -87.193 -53.053 15.710 1.00 10.05 C
ATOM 22 P C B1981 -90.579 -49.067 18.307 1.00 5.19 P
ATOM 23 OP1 C B1981 -91.301 -47.775 18.378 1.00 9.67 O
ATOM 24 OP2 C B1981 -89.121 -49.122 18.628 1.00 9.67 O
ATOM 25 O5' C B1981 -91.367 -50.097 19.224 1.00 7.82 O
TER
ATOM 2 P G A2128 -102.116 -53.176 13.996 1.00 37.60 P
ATOM 3 OP1 G A2128 -102.501 -51.801 13.591 1.00 31.74 O
ATOM 4 OP2 G A2128 -101.713 -54.176 12.946 1.00 31.74 O
ATOM 5 O5' G A2128 -100.960 -52.998 15.080 1.00 0.79 O
ATOM 6 C5' G A2128 -100.615 -54.058 15.982 1.00 0.79 C
ATOM 7 C4' G A2128 -99.178 -53.925 16.432 1.00 0.79 C
ATOM 8 O4' G A2128 -98.308 -53.932 15.266 1.00 0.79 O
ATOM 9 C3' G A2128 -98.816 -52.650 17.172 1.00 0.79 C
ATOM 10 O3' G A2128 -99.120 -52.737 18.556 1.00 0.79 O
ATOM 11 C2' G A2128 -97.321 -52.560 16.918 1.00 0.79 C
ATOM 12 O2' G A2128 -96.612 -53.451 17.759 1.00 0.79 O
ATOM 13 C1' G A2128 -97.222 -53.045 15.468 1.00 0.79 C
ATOM 14 N9 G A2128 -97.372 -51.954 14.507 1.00 8.46 N
ATOM 15 C8 G A2128 -98.492 -51.683 13.766 1.00 8.46 C
ATOM 16 N7 G A2128 -98.364 -50.632 13.007 1.00 8.46 N
ATOM 17 C5 G A2128 -97.082 -50.184 13.255 1.00 8.46 C
ATOM 18 C6 G A2128 -96.381 -49.083 12.713 1.00 8.46 C
ATOM 19 O6 G A2128 -96.765 -48.259 11.874 1.00 8.46 O
ATOM 20 N1 G A2128 -95.102 -48.985 13.236 1.00 8.46 N
ATOM 21 C2 G A2128 -94.569 -49.837 14.153 1.00 8.46 C
ATOM 22 N2 G A2128 -93.325 -49.562 14.532 1.00 8.46 N
ATOM 23 N3 G A2128 -95.209 -50.879 14.662 1.00 8.46 N
ATOM 24 C4 G A2128 -96.452 -50.990 14.174 1.00 8.46 C
ATOM 25 P G A2129 -99.977 -51.564 19.266 1.00 7.59 P
ATOM 26 OP1 G A2129 -100.407 -52.008 20.615 1.00 18.97 O
ATOM 27 OP2 G A2129 -101.000 -51.095 18.302 1.00 18.97 O
ATOM 28 O5' G A2129 -98.916 -50.401 19.456 1.00 4.26 O
TER
ATOM 1 O3' C B1979 -85.142 -48.967 14.383 1.00 9.65 O
ATOM 2 P C B1980 -85.985 -48.598 15.686 1.00 30.46 P
ATOM 3 OP1 C B1980 -86.386 -47.186 15.494 1.00 36.83 O
ATOM 4 OP2 C B1980 -85.196 -48.985 16.880 1.00 36.83 O
ATOM 5 O5' C B1980 -87.259 -49.555 15.620 1.00 7.43 O
ATOM 6 C5' C B1980 -88.363 -49.275 14.733 1.00 7.43 C
ATOM 7 C4' C B1980 -89.459 -50.303 14.908 1.00 7.43 C
ATOM 8 O4' C B1980 -89.031 -51.576 14.370 1.00 7.43 O
ATOM 9 C3' C B1980 -89.852 -50.615 16.338 1.00 7.43 C
ATOM 10 O3' C B1980 -90.772 -49.659 16.829 1.00 7.43 O
ATOM 11 C2' C B1980 -90.438 -52.020 16.235 1.00 7.43 C
ATOM 12 O2' C B1980 -91.770 -52.046 15.789 1.00 7.43 O
ATOM 13 C1' C B1980 -89.580 -52.636 15.136 1.00 7.43 C
ATOM 14 N1 C B1980 -88.491 -53.491 15.656 1.00 10.05 N
ATOM 15 C2 C B1980 -88.818 -54.771 16.101 1.00 10.05 C
ATOM 16 O2 C B1980 -90.008 -55.143 16.021 1.00 10.05 O
ATOM 17 N3 C B1980 -87.835 -55.574 16.602 1.00 10.05 N
ATOM 18 C4 C B1980 -86.576 -55.135 16.656 1.00 10.05 C
ATOM 19 N4 C B1980 -85.646 -55.949 17.158 1.00 10.05 N
ATOM 20 C5 C B1980 -86.214 -53.835 16.197 1.00 10.05 C
ATOM 21 C6 C B1980 -87.193 -53.053 15.710 1.00 10.05 C
ATOM 22 P C B1981 -90.579 -49.067 18.307 1.00 5.19 P
ATOM 23 OP1 C B1981 -91.301 -47.775 18.378 1.00 9.67 O
ATOM 24 OP2 C B1981 -89.121 -49.122 18.628 1.00 9.67 O
ATOM 25 O5' C B1981 -91.367 -50.097 19.224 1.00 7.82 O
TER
Atoms:
OP1: (-102.501,-51.801,13.591)
OP2: (-101.713,-54.176,12.946)
C3': (-98.816,-52.650,17.172)
C1': (-97.222,-53.045,15.468)
C5': (-100.615,-54.058,15.982)
O6: (-96.765,-48.259,11.874)
O4': (-98.308,-53.932,15.266)
C8: (-98.492,-51.683,13.766)
C2: (-94.569,-49.837,14.153)
C6: (-96.381,-49.083,12.713)
C5: (-97.082,-50.184,13.255)
C4: (-96.452,-50.990,14.174)
P: (-102.116,-53.176,13.996)
C4': (-99.178,-53.925,16.432)
C2': (-97.321,-52.560,16.918)
O2': (-96.612,-53.451,17.759)
N1: (-95.102,-48.985,13.236)
N2: (-93.325,-49.562,14.532)
N3: (-95.209,-50.879,14.662)
N7: (-98.364,-50.632,13.007)
N9: (-97.372,-51.954,14.507)
O5': (-100.960,-52.998,15.080)
O3': (-99.120,-52.737,18.556)
OP2: (-101.713,-54.176,12.946)
C3': (-98.816,-52.650,17.172)
C1': (-97.222,-53.045,15.468)
C5': (-100.615,-54.058,15.982)
O6: (-96.765,-48.259,11.874)
O4': (-98.308,-53.932,15.266)
C8: (-98.492,-51.683,13.766)
C2: (-94.569,-49.837,14.153)
C6: (-96.381,-49.083,12.713)
C5: (-97.082,-50.184,13.255)
C4: (-96.452,-50.990,14.174)
P: (-102.116,-53.176,13.996)
C4': (-99.178,-53.925,16.432)
C2': (-97.321,-52.560,16.918)
O2': (-96.612,-53.451,17.759)
N1: (-95.102,-48.985,13.236)
N2: (-93.325,-49.562,14.532)
N3: (-95.209,-50.879,14.662)
N7: (-98.364,-50.632,13.007)
N9: (-97.372,-51.954,14.507)
O5': (-100.960,-52.998,15.080)
O3': (-99.120,-52.737,18.556)
C2: (-88.818,-54.771,16.101)
OP1: (-86.386,-47.186,15.494)
OP2: (-85.196,-48.985,16.880)
C4: (-86.576,-55.135,16.656)
O5': (-87.259,-49.555,15.620)
C3': (-89.852,-50.615,16.338)
C1': (-89.580,-52.636,15.136)
O4': (-89.031,-51.576,14.370)
C5': (-88.363,-49.275,14.733)
P: (-85.985,-48.598,15.686)
O2: (-90.008,-55.143,16.021)
C4': (-89.459,-50.303,14.908)
C2': (-90.438,-52.020,16.235)
O2': (-91.770,-52.046,15.789)
N1: (-88.491,-53.491,15.656)
N3: (-87.835,-55.574,16.602)
N4: (-85.646,-55.949,17.158)
C6: (-87.193,-53.053,15.710)
C5: (-86.214,-53.835,16.197)
O3': (-90.772,-49.659,16.829)
OP1: (-86.386,-47.186,15.494)
OP2: (-85.196,-48.985,16.880)
C4: (-86.576,-55.135,16.656)
O5': (-87.259,-49.555,15.620)
C3': (-89.852,-50.615,16.338)
C1': (-89.580,-52.636,15.136)
O4': (-89.031,-51.576,14.370)
C5': (-88.363,-49.275,14.733)
P: (-85.985,-48.598,15.686)
O2: (-90.008,-55.143,16.021)
C4': (-89.459,-50.303,14.908)
C2': (-90.438,-52.020,16.235)
O2': (-91.770,-52.046,15.789)
N1: (-88.491,-53.491,15.656)
N3: (-87.835,-55.574,16.602)
N4: (-85.646,-55.949,17.158)
C6: (-87.193,-53.053,15.710)
C5: (-86.214,-53.835,16.197)
O3': (-90.772,-49.659,16.829)
Image (generated by PyMOL):