ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUW:B9:B10

Extra

PDB:
ATOM 1 O3' U A 8 -8.128 -3.966 -26.640 1.00 88.48 O
ATOM 2 P G A 9 -9.014 -4.630 -27.793 1.00 89.79 P
ATOM 3 OP1 G A 9 -8.129 -4.717 -28.981 1.00 88.99 O
ATOM 4 OP2 G A 9 -10.327 -3.922 -27.827 1.00 90.22 O
ATOM 5 O5' G A 9 -9.321 -6.099 -27.259 1.00 88.25 O
ATOM 6 C5' G A 9 -10.507 -6.349 -26.540 1.00 87.69 C
ATOM 7 C4' G A 9 -10.329 -7.682 -25.859 1.00 88.05 C
ATOM 8 O4' G A 9 -8.970 -7.723 -25.363 1.00 87.26 O
ATOM 9 C3' G A 9 -11.182 -7.891 -24.624 1.00 88.91 C
ATOM 10 O3' G A 9 -12.462 -8.431 -24.991 1.00 92.31 O
ATOM 11 C2' G A 9 -10.320 -8.779 -23.708 1.00 87.58 C
ATOM 12 O2' G A 9 -10.687 -10.154 -23.701 1.00 88.23 O
ATOM 13 C1' G A 9 -8.884 -8.568 -24.232 1.00 83.81 C
ATOM 14 N9 G A 9 -7.901 -7.948 -23.326 1.00 82.55 N
ATOM 15 C8 G A 9 -6.556 -8.257 -23.264 1.00 82.15 C
ATOM 16 N7 G A 9 -5.876 -7.570 -22.383 1.00 81.37 N
ATOM 17 C5 G A 9 -6.829 -6.742 -21.821 1.00 81.24 C
ATOM 18 C6 G A 9 -6.689 -5.765 -20.812 1.00 81.26 C
ATOM 19 O6 G A 9 -5.684 -5.426 -20.200 1.00 81.94 O
ATOM 20 N1 G A 9 -7.879 -5.127 -20.518 1.00 82.11 N
ATOM 21 C2 G A 9 -9.073 -5.400 -21.139 1.00 82.30 C
ATOM 22 N2 G A 9 -10.097 -4.676 -20.681 1.00 82.08 N
ATOM 23 N3 G A 9 -9.230 -6.316 -22.093 1.00 82.03 N
ATOM 24 C4 G A 9 -8.074 -6.953 -22.389 1.00 81.71 C
ATOM 25 P C A 10 -13.729 -7.433 -24.957 1.00 94.73 P
ATOM 26 OP1 C A 10 -14.966 -8.257 -24.878 1.00 94.57 O
ATOM 27 OP2 C A 10 -13.552 -6.417 -26.016 1.00 93.25 O
ATOM 28 O5' C A 10 -13.553 -6.692 -23.549 1.00 94.39 O
TER

ATOM 1 O3' G B 9 -12.462 -8.431 -24.991 1.00 92.31 O
ATOM 2 P C B 10 -13.729 -7.433 -24.957 1.00 94.73 P
ATOM 3 OP1 C B 10 -14.966 -8.257 -24.878 1.00 94.57 O
ATOM 4 OP2 C B 10 -13.552 -6.417 -26.016 1.00 93.25 O
ATOM 5 O5' C B 10 -13.553 -6.692 -23.549 1.00 94.39 O
ATOM 6 C5' C B 10 -13.962 -7.315 -22.331 1.00 93.24 C
ATOM 7 C4' C B 10 -14.132 -6.290 -21.226 1.00 91.47 C
ATOM 8 O4' C B 10 -12.981 -5.419 -21.141 1.00 90.25 O
ATOM 9 C3' C B 10 -15.348 -5.389 -21.389 1.00 91.55 C
ATOM 10 O3' C B 10 -16.003 -5.320 -20.125 1.00 92.72 O
ATOM 11 C2' C B 10 -14.788 -4.043 -21.870 1.00 91.21 C
ATOM 12 O2' C B 10 -15.456 -2.925 -21.314 1.00 92.03 O
ATOM 13 C1' C B 10 -13.336 -4.069 -21.398 1.00 89.92 C
ATOM 14 N1 C B 10 -12.292 -3.499 -22.347 1.00 89.40 N
ATOM 15 C2 C B 10 -11.274 -2.668 -21.826 1.00 88.66 C
ATOM 16 O2 C B 10 -11.262 -2.411 -20.611 1.00 87.84 O
ATOM 17 N3 C B 10 -10.326 -2.169 -22.673 1.00 88.41 N
ATOM 18 C4 C B 10 -10.363 -2.471 -23.980 1.00 89.19 C
ATOM 19 N4 C B 10 -9.415 -1.950 -24.778 1.00 89.04 N
ATOM 20 C5 C B 10 -11.385 -3.318 -24.529 1.00 88.73 C
ATOM 21 C6 C B 10 -12.316 -3.798 -23.690 1.00 88.79 C
ATOM 22 P U B 11 -16.711 -6.624 -19.504 1.00 93.59 P
ATOM 23 OP1 U B 11 -16.905 -7.627 -20.588 1.00 93.99 O
ATOM 24 OP2 U B 11 -17.878 -6.128 -18.730 1.00 93.61 O
ATOM 25 O5' U B 11 -15.636 -7.226 -18.479 1.00 90.66 O
TER

Atoms:
OP1: (-8.129,-4.717,-28.981)
OP2: (-10.327,-3.922,-27.827)
C3': (-11.182,-7.891,-24.624)
C1': (-8.884,-8.568,-24.232)
C5': (-10.507,-6.349,-26.540)
O6: (-5.684,-5.426,-20.200)
O4': (-8.970,-7.723,-25.363)
C8: (-6.556,-8.257,-23.264)
C2: (-9.073,-5.400,-21.139)
C6: (-6.689,-5.765,-20.812)
C5: (-6.829,-6.742,-21.821)
C4: (-8.074,-6.953,-22.389)
P: (-9.014,-4.630,-27.793)
C4': (-10.329,-7.682,-25.859)
C2': (-10.320,-8.779,-23.708)
O2': (-10.687,-10.154,-23.701)
N1: (-7.879,-5.127,-20.518)
N2: (-10.097,-4.676,-20.681)
N3: (-9.230,-6.316,-22.093)
N7: (-5.876,-7.570,-22.383)
N9: (-7.901,-7.948,-23.326)
O5': (-9.321,-6.099,-27.259)
O3': (-12.462,-8.431,-24.991)
C2: (-11.274,-2.668,-21.826)
OP1: (-14.966,-8.257,-24.878)
OP2: (-13.552,-6.417,-26.016)
C4: (-10.363,-2.471,-23.980)
O5': (-13.553,-6.692,-23.549)
C3': (-15.348,-5.389,-21.389)
C1': (-13.336,-4.069,-21.398)
O4': (-12.981,-5.419,-21.141)
C5': (-13.962,-7.315,-22.331)
P: (-13.729,-7.433,-24.957)
O2: (-11.262,-2.411,-20.611)
C4': (-14.132,-6.290,-21.226)
C2': (-14.788,-4.043,-21.870)
O2': (-15.456,-2.925,-21.314)
N1: (-12.292,-3.499,-22.347)
N3: (-10.326,-2.169,-22.673)
N4: (-9.415,-1.950,-24.778)
C6: (-12.316,-3.798,-23.690)
C5: (-11.385,-3.318,-24.529)
O3': (-16.003,-5.320,-20.125)
Image (generated by PyMOL):
PyMOL image
show in jmol