Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12092:12091
Extra
PDB:
ATOM 1 O3' C A2091 -0.909 -1.980 61.500 1.00 49.83 O
ATOM 2 P C A2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 3 OP1 C A2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 4 OP2 C A2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 5 O5' C A2092 -2.151 -0.823 59.701 1.00 46.83 O
ATOM 6 C5' C A2092 -2.081 -1.942 58.833 1.00 46.81 C
ATOM 7 C4' C A2092 -3.438 -2.439 58.448 1.00 47.10 C
ATOM 8 O4' C A2092 -4.089 -3.072 59.586 1.00 47.13 O
ATOM 9 C3' C A2092 -4.417 -1.395 58.024 1.00 47.41 C
ATOM 10 O3' C A2092 -4.198 -0.968 56.710 1.00 47.50 O
ATOM 11 C2' C A2092 -5.748 -2.111 58.230 1.00 47.65 C
ATOM 12 O2' C A2092 -5.941 -3.060 57.214 1.00 47.73 O
ATOM 13 C1' C A2092 -5.483 -2.876 59.511 1.00 47.46 C
ATOM 14 N1 C A2092 -5.910 -2.138 60.705 1.00 47.51 N
ATOM 15 C2 C A2092 -7.205 -2.239 61.241 1.00 47.77 C
ATOM 16 O2 C A2092 -8.066 -2.977 60.690 1.00 47.97 O
ATOM 17 N3 C A2092 -7.512 -1.529 62.374 1.00 47.82 N
ATOM 18 C4 C A2092 -6.595 -0.752 62.974 1.00 47.63 C
ATOM 19 N4 C A2092 -6.907 -0.066 64.094 1.00 47.69 N
ATOM 20 C5 C A2092 -5.268 -0.664 62.442 1.00 47.36 C
ATOM 21 C6 C A2092 -4.988 -1.376 61.346 1.00 47.31 C
ATOM 22 P U A2093 -4.661 0.502 56.261 1.00 45.61 P
ATOM 23 OP1 U A2093 -6.163 0.512 56.293 1.00 45.95 O
ATOM 24 OP2 U A2093 -3.980 0.823 54.963 1.00 45.60 O
ATOM 25 O5' U A2093 -4.055 1.419 57.426 1.00 45.44 O
TER
ATOM 1 O3' G B2090 -4.520 -0.367 66.648 1.00 44.55 O
ATOM 2 P C B2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 3 OP1 C B2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 4 OP2 C B2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 5 O5' C B2091 -2.542 -0.998 65.396 1.00 50.06 O
ATOM 6 C5' C B2091 -1.469 -0.979 64.497 1.00 49.87 C
ATOM 7 C4' C B2091 -1.355 -2.312 63.817 1.00 49.79 C
ATOM 8 O4' C B2091 -2.156 -3.294 64.534 1.00 49.88 O
ATOM 9 C3' C B2091 -1.886 -2.336 62.415 1.00 49.97 C
ATOM 10 O3' C B2091 -0.909 -1.980 61.500 1.00 49.83 O
ATOM 11 C2' C B2091 -2.412 -3.742 62.214 1.00 50.01 C
ATOM 12 O2' C B2091 -1.387 -4.580 61.751 1.00 49.79 O
ATOM 13 C1' C B2091 -2.782 -4.176 63.625 1.00 50.00 C
ATOM 14 N1 C B2091 -4.232 -4.167 63.870 1.00 50.30 N
ATOM 15 C2 C B2091 -5.093 -4.896 63.076 1.00 50.50 C
ATOM 16 O2 C B2091 -4.570 -5.483 62.153 1.00 50.41 O
ATOM 17 N3 C B2091 -6.435 -4.958 63.287 1.00 50.79 N
ATOM 18 C4 C B2091 -6.887 -4.278 64.323 1.00 50.87 C
ATOM 19 N4 C B2091 -8.173 -4.303 64.588 1.00 51.16 N
ATOM 20 C5 C B2091 -6.049 -3.531 65.182 1.00 50.68 C
ATOM 21 C6 C B2091 -4.736 -3.513 64.942 1.00 50.40 C
ATOM 22 P C B2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 23 OP1 C B2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 24 OP2 C B2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 25 O5' C B2092 -2.151 -0.823 59.701 1.00 46.83 O
TER
ATOM 2 P C A2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 3 OP1 C A2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 4 OP2 C A2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 5 O5' C A2092 -2.151 -0.823 59.701 1.00 46.83 O
ATOM 6 C5' C A2092 -2.081 -1.942 58.833 1.00 46.81 C
ATOM 7 C4' C A2092 -3.438 -2.439 58.448 1.00 47.10 C
ATOM 8 O4' C A2092 -4.089 -3.072 59.586 1.00 47.13 O
ATOM 9 C3' C A2092 -4.417 -1.395 58.024 1.00 47.41 C
ATOM 10 O3' C A2092 -4.198 -0.968 56.710 1.00 47.50 O
ATOM 11 C2' C A2092 -5.748 -2.111 58.230 1.00 47.65 C
ATOM 12 O2' C A2092 -5.941 -3.060 57.214 1.00 47.73 O
ATOM 13 C1' C A2092 -5.483 -2.876 59.511 1.00 47.46 C
ATOM 14 N1 C A2092 -5.910 -2.138 60.705 1.00 47.51 N
ATOM 15 C2 C A2092 -7.205 -2.239 61.241 1.00 47.77 C
ATOM 16 O2 C A2092 -8.066 -2.977 60.690 1.00 47.97 O
ATOM 17 N3 C A2092 -7.512 -1.529 62.374 1.00 47.82 N
ATOM 18 C4 C A2092 -6.595 -0.752 62.974 1.00 47.63 C
ATOM 19 N4 C A2092 -6.907 -0.066 64.094 1.00 47.69 N
ATOM 20 C5 C A2092 -5.268 -0.664 62.442 1.00 47.36 C
ATOM 21 C6 C A2092 -4.988 -1.376 61.346 1.00 47.31 C
ATOM 22 P U A2093 -4.661 0.502 56.261 1.00 45.61 P
ATOM 23 OP1 U A2093 -6.163 0.512 56.293 1.00 45.95 O
ATOM 24 OP2 U A2093 -3.980 0.823 54.963 1.00 45.60 O
ATOM 25 O5' U A2093 -4.055 1.419 57.426 1.00 45.44 O
TER
ATOM 1 O3' G B2090 -4.520 -0.367 66.648 1.00 44.55 O
ATOM 2 P C B2091 -3.298 0.309 65.866 1.00 50.30 P
ATOM 3 OP1 C B2091 -2.482 1.064 66.871 1.00 50.16 O
ATOM 4 OP2 C B2091 -3.884 1.058 64.686 1.00 50.52 O
ATOM 5 O5' C B2091 -2.542 -0.998 65.396 1.00 50.06 O
ATOM 6 C5' C B2091 -1.469 -0.979 64.497 1.00 49.87 C
ATOM 7 C4' C B2091 -1.355 -2.312 63.817 1.00 49.79 C
ATOM 8 O4' C B2091 -2.156 -3.294 64.534 1.00 49.88 O
ATOM 9 C3' C B2091 -1.886 -2.336 62.415 1.00 49.97 C
ATOM 10 O3' C B2091 -0.909 -1.980 61.500 1.00 49.83 O
ATOM 11 C2' C B2091 -2.412 -3.742 62.214 1.00 50.01 C
ATOM 12 O2' C B2091 -1.387 -4.580 61.751 1.00 49.79 O
ATOM 13 C1' C B2091 -2.782 -4.176 63.625 1.00 50.00 C
ATOM 14 N1 C B2091 -4.232 -4.167 63.870 1.00 50.30 N
ATOM 15 C2 C B2091 -5.093 -4.896 63.076 1.00 50.50 C
ATOM 16 O2 C B2091 -4.570 -5.483 62.153 1.00 50.41 O
ATOM 17 N3 C B2091 -6.435 -4.958 63.287 1.00 50.79 N
ATOM 18 C4 C B2091 -6.887 -4.278 64.323 1.00 50.87 C
ATOM 19 N4 C B2091 -8.173 -4.303 64.588 1.00 51.16 N
ATOM 20 C5 C B2091 -6.049 -3.531 65.182 1.00 50.68 C
ATOM 21 C6 C B2091 -4.736 -3.513 64.942 1.00 50.40 C
ATOM 22 P C B2092 -1.005 -0.566 60.792 1.00 46.54 P
ATOM 23 OP1 C B2092 0.304 -0.322 60.119 1.00 46.33 O
ATOM 24 OP2 C B2092 -1.468 0.410 61.811 1.00 46.65 O
ATOM 25 O5' C B2092 -2.151 -0.823 59.701 1.00 46.83 O
TER
Atoms:
C2: (-7.205,-2.239,61.241)
OP1: (0.304,-0.322,60.119)
OP2: (-1.468,0.410,61.811)
C4: (-6.595,-0.752,62.974)
O5': (-2.151,-0.823,59.701)
C3': (-4.417,-1.395,58.024)
C1': (-5.483,-2.876,59.511)
O4': (-4.089,-3.072,59.586)
C5': (-2.081,-1.942,58.833)
P: (-1.005,-0.566,60.792)
O2: (-8.066,-2.977,60.690)
C4': (-3.438,-2.439,58.448)
C2': (-5.748,-2.111,58.230)
O2': (-5.941,-3.060,57.214)
N1: (-5.910,-2.138,60.705)
N3: (-7.512,-1.529,62.374)
N4: (-6.907,-0.066,64.094)
C6: (-4.988,-1.376,61.346)
C5: (-5.268,-0.664,62.442)
O3': (-4.198,-0.968,56.710)
OP1: (0.304,-0.322,60.119)
OP2: (-1.468,0.410,61.811)
C4: (-6.595,-0.752,62.974)
O5': (-2.151,-0.823,59.701)
C3': (-4.417,-1.395,58.024)
C1': (-5.483,-2.876,59.511)
O4': (-4.089,-3.072,59.586)
C5': (-2.081,-1.942,58.833)
P: (-1.005,-0.566,60.792)
O2: (-8.066,-2.977,60.690)
C4': (-3.438,-2.439,58.448)
C2': (-5.748,-2.111,58.230)
O2': (-5.941,-3.060,57.214)
N1: (-5.910,-2.138,60.705)
N3: (-7.512,-1.529,62.374)
N4: (-6.907,-0.066,64.094)
C6: (-4.988,-1.376,61.346)
C5: (-5.268,-0.664,62.442)
O3': (-4.198,-0.968,56.710)
C2: (-5.093,-4.896,63.076)
OP1: (-2.482,1.064,66.871)
OP2: (-3.884,1.058,64.686)
C4: (-6.887,-4.278,64.323)
O5': (-2.542,-0.998,65.396)
C3': (-1.886,-2.336,62.415)
C1': (-2.782,-4.176,63.625)
O4': (-2.156,-3.294,64.534)
C5': (-1.469,-0.979,64.497)
P: (-3.298,0.309,65.866)
O2: (-4.570,-5.483,62.153)
C4': (-1.355,-2.312,63.817)
C2': (-2.412,-3.742,62.214)
O2': (-1.387,-4.580,61.751)
N1: (-4.232,-4.167,63.870)
N3: (-6.435,-4.958,63.287)
N4: (-8.173,-4.303,64.588)
C6: (-4.736,-3.513,64.942)
C5: (-6.049,-3.531,65.182)
O3': (-0.909,-1.980,61.500)
OP1: (-2.482,1.064,66.871)
OP2: (-3.884,1.058,64.686)
C4: (-6.887,-4.278,64.323)
O5': (-2.542,-0.998,65.396)
C3': (-1.886,-2.336,62.415)
C1': (-2.782,-4.176,63.625)
O4': (-2.156,-3.294,64.534)
C5': (-1.469,-0.979,64.497)
P: (-3.298,0.309,65.866)
O2: (-4.570,-5.483,62.153)
C4': (-1.355,-2.312,63.817)
C2': (-2.412,-3.742,62.214)
O2': (-1.387,-4.580,61.751)
N1: (-4.232,-4.167,63.870)
N3: (-6.435,-4.958,63.287)
N4: (-8.173,-4.303,64.588)
C6: (-4.736,-3.513,64.942)
C5: (-6.049,-3.531,65.182)
O3': (-0.909,-1.980,61.500)
Image (generated by PyMOL):