ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A110:A280

Extra

PDB:
ATOM 1 O3' C A 109 128.024 72.965 -17.629 1.00 26.79 O
ATOM 2 P G A 110 128.781 71.682 -17.025 1.00 26.99 P
ATOM 3 OP1 G A 110 128.065 70.469 -17.477 1.00 27.68 O
ATOM 4 OP2 G A 110 130.218 71.791 -17.316 1.00 28.71 O
ATOM 5 O5' G A 110 128.555 71.896 -15.454 1.00 25.75 O
ATOM 6 C5' G A 110 129.039 70.959 -14.512 1.00 24.14 C
ATOM 7 C4' G A 110 130.061 71.606 -13.627 1.00 24.91 C
ATOM 8 O4' G A 110 131.209 72.002 -14.422 1.00 24.99 O
ATOM 9 C3' G A 110 129.646 72.892 -12.947 1.00 25.49 C
ATOM 10 O3' G A 110 128.841 72.698 -11.814 1.00 25.26 O
ATOM 11 C2' G A 110 130.988 73.534 -12.623 1.00 26.28 C
ATOM 12 O2' G A 110 131.616 73.002 -11.471 1.00 27.85 O
ATOM 13 C1' G A 110 131.809 73.154 -13.852 1.00 26.08 C
ATOM 14 N9 G A 110 131.801 74.242 -14.826 1.00 25.93 N
ATOM 15 C8 G A 110 131.243 74.248 -16.080 1.00 26.11 C
ATOM 16 N7 G A 110 131.380 75.389 -16.694 1.00 26.45 N
ATOM 17 C5 G A 110 132.074 76.184 -15.792 1.00 26.73 C
ATOM 18 C6 G A 110 132.508 77.521 -15.899 1.00 26.95 C
ATOM 19 O6 G A 110 132.364 78.299 -16.848 1.00 31.49 O
ATOM 20 N1 G A 110 133.174 77.938 -14.753 1.00 24.25 N
ATOM 21 C2 G A 110 133.394 77.168 -13.646 1.00 25.01 C
ATOM 22 N2 G A 110 134.046 77.753 -12.627 1.00 24.33 N
ATOM 23 N3 G A 110 133.001 75.915 -13.537 1.00 27.73 N
ATOM 24 C4 G A 110 132.349 75.491 -14.640 1.00 26.33 C
ATOM 25 P C A 111 127.598 73.686 -11.569 1.00 24.51 P
ATOM 26 OP1 C A 111 126.742 73.102 -10.513 1.00 22.49 O
ATOM 27 OP2 C A 111 127.026 73.975 -12.921 1.00 27.13 O
ATOM 28 O5' C A 111 128.257 75.010 -11.010 1.00 24.36 O
TER

ATOM 1 O3' G B 279 139.365 75.978 -8.509 1.00 24.89 O
ATOM 2 P C B 280 139.220 77.495 -7.959 1.00 25.01 P
ATOM 3 OP1 C B 280 140.142 78.313 -8.801 1.00 26.08 O
ATOM 4 OP2 C B 280 139.382 77.457 -6.476 1.00 25.91 O
ATOM 5 O5' C B 280 137.738 77.941 -8.304 1.00 23.87 O
ATOM 6 C5' C B 280 137.388 78.374 -9.634 1.00 24.97 C
ATOM 7 C4' C B 280 135.928 78.782 -9.702 1.00 25.26 C
ATOM 8 O4' C B 280 135.091 77.629 -9.416 1.00 27.20 O
ATOM 9 C3' C B 280 135.455 79.824 -8.703 1.00 26.85 C
ATOM 10 O3' C B 280 135.723 81.147 -9.092 1.00 28.17 O
ATOM 11 C2' C B 280 133.962 79.552 -8.642 1.00 26.99 C
ATOM 12 O2' C B 280 133.288 80.085 -9.760 1.00 28.32 O
ATOM 13 C1' C B 280 133.929 78.030 -8.710 1.00 25.54 C
ATOM 14 N1 C B 280 134.000 77.497 -7.340 1.00 23.71 N
ATOM 15 C2 C B 280 132.812 77.350 -6.604 1.00 25.03 C
ATOM 16 O2 C B 280 131.720 77.546 -7.173 1.00 29.64 O
ATOM 17 N3 C B 280 132.883 76.988 -5.300 1.00 20.18 N
ATOM 18 C4 C B 280 134.066 76.744 -4.745 1.00 18.85 C
ATOM 19 N4 C B 280 134.099 76.442 -3.464 1.00 18.82 N
ATOM 20 C5 C B 280 135.276 76.812 -5.487 1.00 21.66 C
ATOM 21 C6 C B 280 135.200 77.192 -6.769 1.00 21.77 C
ATOM 22 P C B 281 135.870 82.283 -7.962 1.00 28.45 P
ATOM 23 OP1 C B 281 136.161 83.537 -8.710 1.00 29.39 O
ATOM 24 OP2 C B 281 136.805 81.816 -6.911 1.00 27.95 O
ATOM 25 O5' C B 281 134.403 82.394 -7.336 1.00 29.36 O
TER

Atoms:
OP1: (128.065,70.469,-17.477)
OP2: (130.218,71.791,-17.316)
C3': (129.646,72.892,-12.947)
C1': (131.809,73.154,-13.852)
C5': (129.039,70.959,-14.512)
O6: (132.364,78.299,-16.848)
O4': (131.209,72.002,-14.422)
C8: (131.243,74.248,-16.080)
C2: (133.394,77.168,-13.646)
C6: (132.508,77.521,-15.899)
C5: (132.074,76.184,-15.792)
C4: (132.349,75.491,-14.640)
P: (128.781,71.682,-17.025)
C4': (130.061,71.606,-13.627)
C2': (130.988,73.534,-12.623)
O2': (131.616,73.002,-11.471)
N1: (133.174,77.938,-14.753)
N2: (134.046,77.753,-12.627)
N3: (133.001,75.915,-13.537)
N7: (131.380,75.389,-16.694)
N9: (131.801,74.242,-14.826)
O5': (128.555,71.896,-15.454)
O3': (128.841,72.698,-11.814)
C2: (132.812,77.350,-6.604)
OP1: (140.142,78.313,-8.801)
OP2: (139.382,77.457,-6.476)
C4: (134.066,76.744,-4.745)
O5': (137.738,77.941,-8.304)
C3': (135.455,79.824,-8.703)
C1': (133.929,78.030,-8.710)
O4': (135.091,77.629,-9.416)
C5': (137.388,78.374,-9.634)
P: (139.220,77.495,-7.959)
O2: (131.720,77.546,-7.173)
C4': (135.928,78.782,-9.702)
C2': (133.962,79.552,-8.642)
O2': (133.288,80.085,-9.760)
N1: (134.000,77.497,-7.340)
N3: (132.883,76.988,-5.300)
N4: (134.099,76.442,-3.464)
C6: (135.200,77.192,-6.769)
C5: (135.276,76.812,-5.487)
O3': (135.723,81.147,-9.092)
Image (generated by PyMOL):
PyMOL image
show in jmol