Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQE:A1310:A1213
Extra
PDB:
ATOM 1 O3' A A1309 247.321 109.187 -10.638 1.00 42.99 O
ATOM 2 P G A1310 247.475 109.798 -12.119 1.00 42.01 P
ATOM 3 OP1 G A1310 246.558 109.061 -13.048 1.00 41.32 O
ATOM 4 OP2 G A1310 248.933 109.804 -12.393 1.00 45.83 O
ATOM 5 O5' G A1310 246.967 111.306 -11.993 1.00 39.48 O
ATOM 6 C5' G A1310 245.570 111.615 -11.893 1.00 37.75 C
ATOM 7 C4' G A1310 245.380 113.086 -11.627 1.00 36.60 C
ATOM 8 O4' G A1310 246.120 113.448 -10.436 1.00 37.12 O
ATOM 9 C3' G A1310 245.897 114.012 -12.709 1.00 35.92 C
ATOM 10 O3' G A1310 244.891 114.235 -13.680 1.00 37.18 O
ATOM 11 C2' G A1310 246.229 115.287 -11.943 1.00 35.60 C
ATOM 12 O2' G A1310 245.120 116.122 -11.733 1.00 33.10 O
ATOM 13 C1' G A1310 246.682 114.739 -10.590 1.00 37.08 C
ATOM 14 N9 G A1310 248.134 114.620 -10.465 1.00 39.87 N
ATOM 15 C8 G A1310 248.862 113.456 -10.479 1.00 40.20 C
ATOM 16 N7 G A1310 250.144 113.652 -10.345 1.00 42.14 N
ATOM 17 C5 G A1310 250.278 115.030 -10.234 1.00 40.89 C
ATOM 18 C6 G A1310 251.444 115.832 -10.079 1.00 41.36 C
ATOM 19 O6 G A1310 252.626 115.470 -10.027 1.00 40.94 O
ATOM 20 N1 G A1310 251.130 117.185 -9.995 1.00 41.78 N
ATOM 21 C2 G A1310 249.859 117.704 -10.070 1.00 41.37 C
ATOM 22 N2 G A1310 249.759 119.030 -9.946 1.00 40.12 N
ATOM 23 N3 G A1310 248.768 116.971 -10.243 1.00 41.31 N
ATOM 24 C4 G A1310 249.049 115.648 -10.308 1.00 40.57 C
ATOM 25 P C A1311 245.189 113.910 -15.226 1.00 38.37 P
ATOM 26 OP1 C A1311 243.979 114.288 -16.019 1.00 38.10 O
ATOM 27 OP2 C A1311 245.707 112.519 -15.273 1.00 36.89 O
ATOM 28 O5' C A1311 246.328 114.956 -15.618 1.00 39.60 O
TER
ATOM 1 O3' A B1212 247.579 123.291 -9.090 1.00 44.96 O
ATOM 2 P C B1213 247.762 124.197 -10.419 1.00 45.85 P
ATOM 3 OP1 C B1213 248.966 125.048 -10.201 1.00 47.61 O
ATOM 4 OP2 C B1213 246.493 124.867 -10.796 1.00 43.53 O
ATOM 5 O5' C B1213 248.120 123.126 -11.540 1.00 46.81 O
ATOM 6 C5' C B1213 249.183 122.174 -11.349 1.00 46.91 C
ATOM 7 C4' C B1213 248.835 120.864 -12.018 1.00 48.22 C
ATOM 8 O4' C B1213 247.669 120.308 -11.363 1.00 48.48 O
ATOM 9 C3' C B1213 248.464 120.906 -13.496 1.00 49.03 C
ATOM 10 O3' C B1213 249.596 120.802 -14.349 1.00 49.32 O
ATOM 11 C2' C B1213 247.601 119.663 -13.658 1.00 49.76 C
ATOM 12 O2' C B1213 248.388 118.506 -13.870 1.00 50.91 O
ATOM 13 C1' C B1213 246.891 119.584 -12.302 1.00 49.02 C
ATOM 14 N1 C B1213 245.514 120.136 -12.336 1.00 47.56 N
ATOM 15 C2 C B1213 244.467 119.316 -12.786 1.00 46.23 C
ATOM 16 O2 C B1213 244.708 118.141 -13.100 1.00 46.61 O
ATOM 17 N3 C B1213 243.222 119.824 -12.872 1.00 44.67 N
ATOM 18 C4 C B1213 242.994 121.088 -12.532 1.00 44.39 C
ATOM 19 N4 C B1213 241.756 121.549 -12.667 1.00 44.12 N
ATOM 20 C5 C B1213 244.027 121.938 -12.047 1.00 44.90 C
ATOM 21 C6 C B1213 245.259 121.426 -11.961 1.00 46.41 C
ATOM 22 P A B1214 249.430 121.057 -15.928 1.00 49.23 P
ATOM 23 OP1 A B1214 247.995 120.980 -16.242 1.00 51.90 O
ATOM 24 OP2 A B1214 250.353 120.169 -16.658 1.00 51.31 O
ATOM 25 O5' A B1214 249.879 122.564 -16.110 1.00 48.56 O
TER
ATOM 2 P G A1310 247.475 109.798 -12.119 1.00 42.01 P
ATOM 3 OP1 G A1310 246.558 109.061 -13.048 1.00 41.32 O
ATOM 4 OP2 G A1310 248.933 109.804 -12.393 1.00 45.83 O
ATOM 5 O5' G A1310 246.967 111.306 -11.993 1.00 39.48 O
ATOM 6 C5' G A1310 245.570 111.615 -11.893 1.00 37.75 C
ATOM 7 C4' G A1310 245.380 113.086 -11.627 1.00 36.60 C
ATOM 8 O4' G A1310 246.120 113.448 -10.436 1.00 37.12 O
ATOM 9 C3' G A1310 245.897 114.012 -12.709 1.00 35.92 C
ATOM 10 O3' G A1310 244.891 114.235 -13.680 1.00 37.18 O
ATOM 11 C2' G A1310 246.229 115.287 -11.943 1.00 35.60 C
ATOM 12 O2' G A1310 245.120 116.122 -11.733 1.00 33.10 O
ATOM 13 C1' G A1310 246.682 114.739 -10.590 1.00 37.08 C
ATOM 14 N9 G A1310 248.134 114.620 -10.465 1.00 39.87 N
ATOM 15 C8 G A1310 248.862 113.456 -10.479 1.00 40.20 C
ATOM 16 N7 G A1310 250.144 113.652 -10.345 1.00 42.14 N
ATOM 17 C5 G A1310 250.278 115.030 -10.234 1.00 40.89 C
ATOM 18 C6 G A1310 251.444 115.832 -10.079 1.00 41.36 C
ATOM 19 O6 G A1310 252.626 115.470 -10.027 1.00 40.94 O
ATOM 20 N1 G A1310 251.130 117.185 -9.995 1.00 41.78 N
ATOM 21 C2 G A1310 249.859 117.704 -10.070 1.00 41.37 C
ATOM 22 N2 G A1310 249.759 119.030 -9.946 1.00 40.12 N
ATOM 23 N3 G A1310 248.768 116.971 -10.243 1.00 41.31 N
ATOM 24 C4 G A1310 249.049 115.648 -10.308 1.00 40.57 C
ATOM 25 P C A1311 245.189 113.910 -15.226 1.00 38.37 P
ATOM 26 OP1 C A1311 243.979 114.288 -16.019 1.00 38.10 O
ATOM 27 OP2 C A1311 245.707 112.519 -15.273 1.00 36.89 O
ATOM 28 O5' C A1311 246.328 114.956 -15.618 1.00 39.60 O
TER
ATOM 1 O3' A B1212 247.579 123.291 -9.090 1.00 44.96 O
ATOM 2 P C B1213 247.762 124.197 -10.419 1.00 45.85 P
ATOM 3 OP1 C B1213 248.966 125.048 -10.201 1.00 47.61 O
ATOM 4 OP2 C B1213 246.493 124.867 -10.796 1.00 43.53 O
ATOM 5 O5' C B1213 248.120 123.126 -11.540 1.00 46.81 O
ATOM 6 C5' C B1213 249.183 122.174 -11.349 1.00 46.91 C
ATOM 7 C4' C B1213 248.835 120.864 -12.018 1.00 48.22 C
ATOM 8 O4' C B1213 247.669 120.308 -11.363 1.00 48.48 O
ATOM 9 C3' C B1213 248.464 120.906 -13.496 1.00 49.03 C
ATOM 10 O3' C B1213 249.596 120.802 -14.349 1.00 49.32 O
ATOM 11 C2' C B1213 247.601 119.663 -13.658 1.00 49.76 C
ATOM 12 O2' C B1213 248.388 118.506 -13.870 1.00 50.91 O
ATOM 13 C1' C B1213 246.891 119.584 -12.302 1.00 49.02 C
ATOM 14 N1 C B1213 245.514 120.136 -12.336 1.00 47.56 N
ATOM 15 C2 C B1213 244.467 119.316 -12.786 1.00 46.23 C
ATOM 16 O2 C B1213 244.708 118.141 -13.100 1.00 46.61 O
ATOM 17 N3 C B1213 243.222 119.824 -12.872 1.00 44.67 N
ATOM 18 C4 C B1213 242.994 121.088 -12.532 1.00 44.39 C
ATOM 19 N4 C B1213 241.756 121.549 -12.667 1.00 44.12 N
ATOM 20 C5 C B1213 244.027 121.938 -12.047 1.00 44.90 C
ATOM 21 C6 C B1213 245.259 121.426 -11.961 1.00 46.41 C
ATOM 22 P A B1214 249.430 121.057 -15.928 1.00 49.23 P
ATOM 23 OP1 A B1214 247.995 120.980 -16.242 1.00 51.90 O
ATOM 24 OP2 A B1214 250.353 120.169 -16.658 1.00 51.31 O
ATOM 25 O5' A B1214 249.879 122.564 -16.110 1.00 48.56 O
TER
Atoms:
OP1: (246.558,109.061,-13.048)
OP2: (248.933,109.804,-12.393)
C3': (245.897,114.012,-12.709)
C1': (246.682,114.739,-10.590)
C5': (245.570,111.615,-11.893)
O6: (252.626,115.470,-10.027)
O4': (246.120,113.448,-10.436)
C8: (248.862,113.456,-10.479)
C2: (249.859,117.704,-10.070)
C6: (251.444,115.832,-10.079)
C5: (250.278,115.030,-10.234)
C4: (249.049,115.648,-10.308)
P: (247.475,109.798,-12.119)
C4': (245.380,113.086,-11.627)
C2': (246.229,115.287,-11.943)
O2': (245.120,116.122,-11.733)
N1: (251.130,117.185,-9.995)
N2: (249.759,119.030,-9.946)
N3: (248.768,116.971,-10.243)
N7: (250.144,113.652,-10.345)
N9: (248.134,114.620,-10.465)
O5': (246.967,111.306,-11.993)
O3': (244.891,114.235,-13.680)
OP2: (248.933,109.804,-12.393)
C3': (245.897,114.012,-12.709)
C1': (246.682,114.739,-10.590)
C5': (245.570,111.615,-11.893)
O6: (252.626,115.470,-10.027)
O4': (246.120,113.448,-10.436)
C8: (248.862,113.456,-10.479)
C2: (249.859,117.704,-10.070)
C6: (251.444,115.832,-10.079)
C5: (250.278,115.030,-10.234)
C4: (249.049,115.648,-10.308)
P: (247.475,109.798,-12.119)
C4': (245.380,113.086,-11.627)
C2': (246.229,115.287,-11.943)
O2': (245.120,116.122,-11.733)
N1: (251.130,117.185,-9.995)
N2: (249.759,119.030,-9.946)
N3: (248.768,116.971,-10.243)
N7: (250.144,113.652,-10.345)
N9: (248.134,114.620,-10.465)
O5': (246.967,111.306,-11.993)
O3': (244.891,114.235,-13.680)
C2: (244.467,119.316,-12.786)
OP1: (248.966,125.048,-10.201)
OP2: (246.493,124.867,-10.796)
C4: (242.994,121.088,-12.532)
O5': (248.120,123.126,-11.540)
C3': (248.464,120.906,-13.496)
C1': (246.891,119.584,-12.302)
O4': (247.669,120.308,-11.363)
C5': (249.183,122.174,-11.349)
P: (247.762,124.197,-10.419)
O2: (244.708,118.141,-13.100)
C4': (248.835,120.864,-12.018)
C2': (247.601,119.663,-13.658)
O2': (248.388,118.506,-13.870)
N1: (245.514,120.136,-12.336)
N3: (243.222,119.824,-12.872)
N4: (241.756,121.549,-12.667)
C6: (245.259,121.426,-11.961)
C5: (244.027,121.938,-12.047)
O3': (249.596,120.802,-14.349)
OP1: (248.966,125.048,-10.201)
OP2: (246.493,124.867,-10.796)
C4: (242.994,121.088,-12.532)
O5': (248.120,123.126,-11.540)
C3': (248.464,120.906,-13.496)
C1': (246.891,119.584,-12.302)
O4': (247.669,120.308,-11.363)
C5': (249.183,122.174,-11.349)
P: (247.762,124.197,-10.419)
O2: (244.708,118.141,-13.100)
C4': (248.835,120.864,-12.018)
C2': (247.601,119.663,-13.658)
O2': (248.388,118.506,-13.870)
N1: (245.514,120.136,-12.336)
N3: (243.222,119.824,-12.872)
N4: (241.756,121.549,-12.667)
C6: (245.259,121.426,-11.961)
C5: (244.027,121.938,-12.047)
O3': (249.596,120.802,-14.349)
Image (generated by PyMOL):