ClaRNA

Doublet info:

Details

Nucleotide types: CG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0183:0414

Extra

PDB:
ATOM 1 O3' A A 182 73.516 94.506 24.195 1.00 45.23 O
ATOM 2 P C A 183 73.687 93.075 24.881 1.00 47.00 P
ATOM 3 OP1 C A 183 74.012 93.349 26.302 1.00 46.90 O
ATOM 4 OP2 C A 183 74.611 92.249 24.064 1.00 45.64 O
ATOM 5 O5' C A 183 72.232 92.436 24.754 1.00 46.46 O
ATOM 6 C5' C A 183 71.068 93.188 25.139 1.00 47.14 C
ATOM 7 C4' C A 183 69.806 92.551 24.597 1.00 46.34 C
ATOM 8 O4' C A 183 69.910 92.412 23.159 1.00 47.23 O
ATOM 9 C3' C A 183 69.488 91.123 25.007 1.00 44.85 C
ATOM 10 O3' C A 183 68.933 91.055 26.312 1.00 44.62 O
ATOM 11 C2' C A 183 68.425 90.755 23.978 1.00 45.00 C
ATOM 12 O2' C A 183 67.172 91.338 24.279 1.00 46.84 O
ATOM 13 C1' C A 183 68.960 91.452 22.727 1.00 44.29 C
ATOM 14 N1 C A 183 69.578 90.546 21.742 1.00 41.80 N
ATOM 15 C2 C A 183 68.738 89.824 20.894 1.00 40.39 C
ATOM 16 O2 C A 183 67.510 89.932 21.034 1.00 38.18 O
ATOM 17 N3 C A 183 69.282 89.022 19.951 1.00 39.12 N
ATOM 18 C4 C A 183 70.607 88.920 19.849 1.00 38.96 C
ATOM 19 N4 C A 183 71.098 88.144 18.886 1.00 37.83 N
ATOM 20 C5 C A 183 71.486 89.619 20.722 1.00 38.97 C
ATOM 21 C6 C A 183 70.936 90.415 21.643 1.00 40.05 C
ATOM 22 P G A 184 69.302 89.824 27.271 1.00 45.26 P
ATOM 23 OP1 G A 184 68.278 89.796 28.340 1.00 45.13 O
ATOM 24 OP2 G A 184 70.743 89.907 27.627 1.00 43.21 O
ATOM 25 O5' G A 184 69.116 88.537 26.356 1.00 46.73 O
TER

ATOM 1 O3' U B 413 72.846 83.648 14.256 1.00 53.41 O
ATOM 2 P G B 414 73.317 84.859 13.321 1.00 53.88 P
ATOM 3 OP1 G B 414 72.190 85.195 12.418 1.00 55.02 O
ATOM 4 OP2 G B 414 74.644 84.516 12.754 1.00 53.66 O
ATOM 5 O5' G B 414 73.497 86.066 14.340 1.00 54.15 O
ATOM 6 C5' G B 414 72.380 86.517 15.123 1.00 52.18 C
ATOM 7 C4' G B 414 72.813 87.581 16.095 1.00 49.80 C
ATOM 8 O4' G B 414 73.825 87.042 16.977 1.00 47.70 O
ATOM 9 C3' G B 414 73.475 88.809 15.499 1.00 48.62 C
ATOM 10 O3' G B 414 72.505 89.720 14.992 1.00 49.80 O
ATOM 11 C2' G B 414 74.222 89.364 16.698 1.00 47.32 C
ATOM 12 O2' G B 414 73.355 90.023 17.599 1.00 47.50 O
ATOM 13 C1' G B 414 74.711 88.074 17.358 1.00 46.12 C
ATOM 14 N9 G B 414 76.053 87.693 16.948 1.00 43.89 N
ATOM 15 C8 G B 414 76.409 86.701 16.070 1.00 42.85 C
ATOM 16 N7 G B 414 77.699 86.594 15.919 1.00 43.50 N
ATOM 17 C5 G B 414 78.223 87.579 16.745 1.00 43.76 C
ATOM 18 C6 G B 414 79.573 87.951 17.000 1.00 44.71 C
ATOM 19 O6 G B 414 80.607 87.474 16.527 1.00 46.14 O
ATOM 20 N1 G B 414 79.650 89.001 17.904 1.00 44.07 N
ATOM 21 C2 G B 414 78.575 89.623 18.481 1.00 45.33 C
ATOM 22 N2 G B 414 78.856 90.628 19.316 1.00 46.36 N
ATOM 23 N3 G B 414 77.317 89.289 18.253 1.00 44.65 N
ATOM 24 C4 G B 414 77.217 88.265 17.382 1.00 43.58 C
ATOM 25 P C B 415 72.865 90.635 13.722 1.00 50.04 P
ATOM 26 OP1 C B 415 71.673 91.466 13.411 1.00 47.60 O
ATOM 27 OP2 C B 415 73.460 89.772 12.664 1.00 49.81 O
ATOM 28 O5' C B 415 74.001 91.594 14.280 1.00 47.90 O
TER

Atoms:
C2: (68.738,89.824,20.894)
OP1: (74.012,93.349,26.302)
OP2: (74.611,92.249,24.064)
C4: (70.607,88.920,19.849)
O5': (72.232,92.436,24.754)
C3': (69.488,91.123,25.007)
C1': (68.960,91.452,22.727)
O4': (69.910,92.412,23.159)
C5': (71.068,93.188,25.139)
P: (73.687,93.075,24.881)
O2: (67.510,89.932,21.034)
C4': (69.806,92.551,24.597)
C2': (68.425,90.755,23.978)
O2': (67.172,91.338,24.279)
N1: (69.578,90.546,21.742)
N3: (69.282,89.022,19.951)
N4: (71.098,88.144,18.886)
C6: (70.936,90.415,21.643)
C5: (71.486,89.619,20.722)
O3': (68.933,91.055,26.312)
OP1: (72.190,85.195,12.418)
OP2: (74.644,84.516,12.754)
C3': (73.475,88.809,15.499)
C1': (74.711,88.074,17.358)
C5': (72.380,86.517,15.123)
O6: (80.607,87.474,16.527)
O4': (73.825,87.042,16.977)
C8: (76.409,86.701,16.070)
C2: (78.575,89.623,18.481)
C6: (79.573,87.951,17.000)
C5: (78.223,87.579,16.745)
C4: (77.217,88.265,17.382)
P: (73.317,84.859,13.321)
C4': (72.813,87.581,16.095)
C2': (74.222,89.364,16.698)
O2': (73.355,90.023,17.599)
N1: (79.650,89.001,17.904)
N2: (78.856,90.628,19.316)
N3: (77.317,89.289,18.253)
N7: (77.699,86.594,15.919)
N9: (76.053,87.693,16.948)
O5': (73.497,86.066,14.340)
O3': (72.505,89.720,14.992)
Image (generated by PyMOL):
PyMOL image
show in jmol