ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A1378:A1372

Extra

PDB:
ATOM 1 O3' C A1377 199.218 106.774 -11.111 1.00 33.25 O
ATOM 2 P G A1378 197.956 105.948 -11.675 1.00 34.29 P
ATOM 3 OP1 G A1378 197.547 105.002 -10.580 1.00 31.45 O
ATOM 4 OP2 G A1378 198.294 105.418 -13.031 1.00 33.71 O
ATOM 5 O5' G A1378 196.801 107.044 -11.859 1.00 33.97 O
ATOM 6 C5' G A1378 196.031 107.523 -10.739 1.00 32.59 C
ATOM 7 C4' G A1378 194.682 108.026 -11.199 1.00 31.80 C
ATOM 8 O4' G A1378 194.869 108.965 -12.296 1.00 31.91 O
ATOM 9 C3' G A1378 193.704 107.002 -11.757 1.00 32.20 C
ATOM 10 O3' G A1378 192.950 106.339 -10.751 1.00 32.56 O
ATOM 11 C2' G A1378 192.794 107.884 -12.585 1.00 33.55 C
ATOM 12 O2' G A1378 191.922 108.593 -11.726 1.00 35.80 O
ATOM 13 C1' G A1378 193.791 108.859 -13.210 1.00 33.75 C
ATOM 14 N9 G A1378 194.304 108.307 -14.466 1.00 36.40 N
ATOM 15 C8 G A1378 195.561 107.802 -14.683 1.00 37.29 C
ATOM 16 N7 G A1378 195.710 107.293 -15.875 1.00 37.97 N
ATOM 17 C5 G A1378 194.486 107.487 -16.491 1.00 37.32 C
ATOM 18 C6 G A1378 194.049 107.128 -17.793 1.00 38.81 C
ATOM 19 O6 G A1378 194.669 106.534 -18.679 1.00 38.53 O
ATOM 20 N1 G A1378 192.745 107.530 -18.020 1.00 39.57 N
ATOM 21 C2 G A1378 191.959 108.187 -17.117 1.00 39.02 C
ATOM 22 N2 G A1378 190.738 108.517 -17.545 1.00 40.13 N
ATOM 23 N3 G A1378 192.343 108.508 -15.892 1.00 38.29 N
ATOM 24 C4 G A1378 193.612 108.134 -15.649 1.00 36.87 C
ATOM 25 P C A1379 192.680 104.754 -10.870 1.00 32.60 P
ATOM 26 OP1 C A1379 191.910 104.317 -9.658 1.00 34.08 O
ATOM 27 OP2 C A1379 193.963 104.081 -11.130 1.00 34.94 O
ATOM 28 O5' C A1379 191.747 104.625 -12.178 1.00 32.49 O
TER

ATOM 1 O3' A B1371 185.083 107.719 -16.842 1.00 25.36 O
ATOM 2 P C B1372 185.223 108.131 -15.307 1.00 26.91 P
ATOM 3 OP1 C B1372 185.302 106.866 -14.477 1.00 24.11 O
ATOM 4 OP2 C B1372 184.163 109.125 -15.061 1.00 27.96 O
ATOM 5 O5' C B1372 186.604 108.886 -15.257 1.00 27.17 O
ATOM 6 C5' C B1372 187.846 108.159 -15.196 1.00 28.44 C
ATOM 7 C4' C B1372 188.914 109.045 -14.632 1.00 27.80 C
ATOM 8 O4' C B1372 189.108 110.156 -15.535 1.00 27.57 O
ATOM 9 C3' C B1372 188.513 109.673 -13.315 1.00 28.65 C
ATOM 10 O3' C B1372 188.903 108.821 -12.277 1.00 30.91 O
ATOM 11 C2' C B1372 189.268 110.992 -13.314 1.00 28.06 C
ATOM 12 O2' C B1372 190.602 110.841 -12.901 1.00 29.86 O
ATOM 13 C1' C B1372 189.289 111.341 -14.799 1.00 26.90 C
ATOM 14 N1 C B1372 188.264 112.295 -15.220 1.00 26.88 N
ATOM 15 C2 C B1372 188.360 113.608 -14.784 1.00 29.52 C
ATOM 16 O2 C B1372 189.232 113.899 -13.960 1.00 33.66 O
ATOM 17 N3 C B1372 187.489 114.527 -15.254 1.00 29.72 N
ATOM 18 C4 C B1372 186.524 114.155 -16.089 1.00 26.36 C
ATOM 19 N4 C B1372 185.699 115.093 -16.534 1.00 28.53 N
ATOM 20 C5 C B1372 186.367 112.809 -16.504 1.00 23.57 C
ATOM 21 C6 C B1372 187.249 111.919 -16.051 1.00 24.68 C
ATOM 22 P A B1373 187.986 108.693 -10.971 1.00 33.26 P
ATOM 23 OP1 A B1373 188.675 107.740 -10.047 1.00 32.66 O
ATOM 24 OP2 A B1373 186.575 108.428 -11.404 1.00 35.54 O
ATOM 25 O5' A B1373 188.060 110.135 -10.355 1.00 32.80 O
TER

Atoms:
OP1: (197.547,105.002,-10.580)
OP2: (198.294,105.418,-13.031)
C3': (193.704,107.002,-11.757)
C1': (193.791,108.859,-13.210)
C5': (196.031,107.523,-10.739)
O6: (194.669,106.534,-18.679)
O4': (194.869,108.965,-12.296)
C8: (195.561,107.802,-14.683)
C2: (191.959,108.187,-17.117)
C6: (194.049,107.128,-17.793)
C5: (194.486,107.487,-16.491)
C4: (193.612,108.134,-15.649)
P: (197.956,105.948,-11.675)
C4': (194.682,108.026,-11.199)
C2': (192.794,107.884,-12.585)
O2': (191.922,108.593,-11.726)
N1: (192.745,107.530,-18.020)
N2: (190.738,108.517,-17.545)
N3: (192.343,108.508,-15.892)
N7: (195.710,107.293,-15.875)
N9: (194.304,108.307,-14.466)
O5': (196.801,107.044,-11.859)
O3': (192.950,106.339,-10.751)
C2: (188.360,113.608,-14.784)
OP1: (185.302,106.866,-14.477)
OP2: (184.163,109.125,-15.061)
C4: (186.524,114.155,-16.089)
O5': (186.604,108.886,-15.257)
C3': (188.513,109.673,-13.315)
C1': (189.289,111.341,-14.799)
O4': (189.108,110.156,-15.535)
C5': (187.846,108.159,-15.196)
P: (185.223,108.131,-15.307)
O2: (189.232,113.899,-13.960)
C4': (188.914,109.045,-14.632)
C2': (189.268,110.992,-13.314)
O2': (190.602,110.841,-12.901)
N1: (188.264,112.295,-15.220)
N3: (187.489,114.527,-15.254)
N4: (185.699,115.093,-16.534)
C6: (187.249,111.919,-16.051)
C5: (186.367,112.809,-16.504)
O3': (188.903,108.821,-12.277)
Image (generated by PyMOL):
PyMOL image
show in jmol