Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1310:A1213
Extra
PDB:
ATOM 1 O3' A A1309 247.831 109.349 -10.485 1.00 75.65 O
ATOM 2 P G A1310 248.045 109.907 -11.981 1.00 75.68 P
ATOM 3 OP1 G A1310 247.136 109.127 -12.880 1.00 76.43 O
ATOM 4 OP2 G A1310 249.519 109.912 -12.226 1.00 77.09 O
ATOM 5 O5' G A1310 247.513 111.418 -11.949 1.00 72.74 O
ATOM 6 C5' G A1310 246.112 111.711 -11.852 1.00 70.45 C
ATOM 7 C4' G A1310 245.909 113.164 -11.511 1.00 69.00 C
ATOM 8 O4' G A1310 246.678 113.461 -10.324 1.00 68.59 O
ATOM 9 C3' G A1310 246.400 114.153 -12.553 1.00 68.82 C
ATOM 10 O3' G A1310 245.389 114.427 -13.511 1.00 69.62 O
ATOM 11 C2' G A1310 246.738 115.386 -11.725 1.00 68.42 C
ATOM 12 O2' G A1310 245.615 116.184 -11.442 1.00 66.77 O
ATOM 13 C1' G A1310 247.226 114.765 -10.417 1.00 69.58 C
ATOM 14 N9 G A1310 248.682 114.673 -10.290 1.00 70.72 N
ATOM 15 C8 G A1310 249.433 113.520 -10.276 1.00 71.60 C
ATOM 16 N7 G A1310 250.713 113.741 -10.141 1.00 73.00 N
ATOM 17 C5 G A1310 250.823 115.125 -10.060 1.00 71.41 C
ATOM 18 C6 G A1310 251.977 115.949 -9.919 1.00 70.79 C
ATOM 19 O6 G A1310 253.163 115.602 -9.836 1.00 71.49 O
ATOM 20 N1 G A1310 251.642 117.301 -9.887 1.00 68.84 N
ATOM 21 C2 G A1310 250.364 117.796 -9.985 1.00 69.00 C
ATOM 22 N2 G A1310 250.246 119.121 -9.934 1.00 67.22 N
ATOM 23 N3 G A1310 249.281 117.041 -10.124 1.00 69.55 N
ATOM 24 C4 G A1310 249.582 115.721 -10.152 1.00 70.58 C
ATOM 25 P C A1311 245.671 114.155 -15.071 1.00 70.66 P
ATOM 26 OP1 C A1311 244.473 114.584 -15.855 1.00 70.50 O
ATOM 27 OP2 C A1311 246.164 112.758 -15.175 1.00 69.32 O
ATOM 28 O5' C A1311 246.825 115.186 -15.432 1.00 71.05 O
TER
ATOM 1 O3' A B1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 2 P C B1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 3 OP1 C B1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 4 OP2 C B1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 5 O5' C B1213 248.559 123.280 -11.451 1.00 75.45 O
ATOM 6 C5' C B1213 249.693 122.387 -11.377 1.00 74.51 C
ATOM 7 C4' C B1213 249.367 121.060 -12.026 1.00 73.77 C
ATOM 8 O4' C B1213 248.233 120.476 -11.344 1.00 73.80 O
ATOM 9 C3' C B1213 248.976 121.076 -13.499 1.00 73.80 C
ATOM 10 O3' C B1213 250.126 120.972 -14.323 1.00 74.91 O
ATOM 11 C2' C B1213 248.137 119.813 -13.634 1.00 73.32 C
ATOM 12 O2' C B1213 248.941 118.669 -13.834 1.00 72.78 O
ATOM 13 C1' C B1213 247.449 119.734 -12.266 1.00 72.79 C
ATOM 14 N1 C B1213 246.062 120.265 -12.271 1.00 70.22 N
ATOM 15 C2 C B1213 245.014 119.426 -12.679 1.00 68.59 C
ATOM 16 O2 C B1213 245.256 118.240 -12.955 1.00 69.98 O
ATOM 17 N3 C B1213 243.765 119.929 -12.763 1.00 65.76 N
ATOM 18 C4 C B1213 243.537 121.199 -12.455 1.00 64.95 C
ATOM 19 N4 C B1213 242.307 121.663 -12.611 1.00 65.59 N
ATOM 20 C5 C B1213 244.565 122.057 -11.989 1.00 66.62 C
ATOM 21 C6 C B1213 245.802 121.556 -11.913 1.00 68.66 C
ATOM 22 P A B1214 250.019 121.255 -15.903 1.00 75.76 P
ATOM 23 OP1 A B1214 248.649 120.901 -16.353 1.00 75.67 O
ATOM 24 OP2 A B1214 251.193 120.593 -16.556 1.00 79.09 O
ATOM 25 O5' A B1214 250.209 122.825 -16.016 1.00 74.41 O
TER
ATOM 2 P G A1310 248.045 109.907 -11.981 1.00 75.68 P
ATOM 3 OP1 G A1310 247.136 109.127 -12.880 1.00 76.43 O
ATOM 4 OP2 G A1310 249.519 109.912 -12.226 1.00 77.09 O
ATOM 5 O5' G A1310 247.513 111.418 -11.949 1.00 72.74 O
ATOM 6 C5' G A1310 246.112 111.711 -11.852 1.00 70.45 C
ATOM 7 C4' G A1310 245.909 113.164 -11.511 1.00 69.00 C
ATOM 8 O4' G A1310 246.678 113.461 -10.324 1.00 68.59 O
ATOM 9 C3' G A1310 246.400 114.153 -12.553 1.00 68.82 C
ATOM 10 O3' G A1310 245.389 114.427 -13.511 1.00 69.62 O
ATOM 11 C2' G A1310 246.738 115.386 -11.725 1.00 68.42 C
ATOM 12 O2' G A1310 245.615 116.184 -11.442 1.00 66.77 O
ATOM 13 C1' G A1310 247.226 114.765 -10.417 1.00 69.58 C
ATOM 14 N9 G A1310 248.682 114.673 -10.290 1.00 70.72 N
ATOM 15 C8 G A1310 249.433 113.520 -10.276 1.00 71.60 C
ATOM 16 N7 G A1310 250.713 113.741 -10.141 1.00 73.00 N
ATOM 17 C5 G A1310 250.823 115.125 -10.060 1.00 71.41 C
ATOM 18 C6 G A1310 251.977 115.949 -9.919 1.00 70.79 C
ATOM 19 O6 G A1310 253.163 115.602 -9.836 1.00 71.49 O
ATOM 20 N1 G A1310 251.642 117.301 -9.887 1.00 68.84 N
ATOM 21 C2 G A1310 250.364 117.796 -9.985 1.00 69.00 C
ATOM 22 N2 G A1310 250.246 119.121 -9.934 1.00 67.22 N
ATOM 23 N3 G A1310 249.281 117.041 -10.124 1.00 69.55 N
ATOM 24 C4 G A1310 249.582 115.721 -10.152 1.00 70.58 C
ATOM 25 P C A1311 245.671 114.155 -15.071 1.00 70.66 P
ATOM 26 OP1 C A1311 244.473 114.584 -15.855 1.00 70.50 O
ATOM 27 OP2 C A1311 246.164 112.758 -15.175 1.00 69.32 O
ATOM 28 O5' C A1311 246.825 115.186 -15.432 1.00 71.05 O
TER
ATOM 1 O3' A B1212 248.096 123.349 -8.976 1.00 73.52 O
ATOM 2 P C B1213 248.245 124.310 -10.267 1.00 75.09 P
ATOM 3 OP1 C B1213 249.470 125.131 -10.022 1.00 75.48 O
ATOM 4 OP2 C B1213 246.975 125.007 -10.573 1.00 71.99 O
ATOM 5 O5' C B1213 248.559 123.280 -11.451 1.00 75.45 O
ATOM 6 C5' C B1213 249.693 122.387 -11.377 1.00 74.51 C
ATOM 7 C4' C B1213 249.367 121.060 -12.026 1.00 73.77 C
ATOM 8 O4' C B1213 248.233 120.476 -11.344 1.00 73.80 O
ATOM 9 C3' C B1213 248.976 121.076 -13.499 1.00 73.80 C
ATOM 10 O3' C B1213 250.126 120.972 -14.323 1.00 74.91 O
ATOM 11 C2' C B1213 248.137 119.813 -13.634 1.00 73.32 C
ATOM 12 O2' C B1213 248.941 118.669 -13.834 1.00 72.78 O
ATOM 13 C1' C B1213 247.449 119.734 -12.266 1.00 72.79 C
ATOM 14 N1 C B1213 246.062 120.265 -12.271 1.00 70.22 N
ATOM 15 C2 C B1213 245.014 119.426 -12.679 1.00 68.59 C
ATOM 16 O2 C B1213 245.256 118.240 -12.955 1.00 69.98 O
ATOM 17 N3 C B1213 243.765 119.929 -12.763 1.00 65.76 N
ATOM 18 C4 C B1213 243.537 121.199 -12.455 1.00 64.95 C
ATOM 19 N4 C B1213 242.307 121.663 -12.611 1.00 65.59 N
ATOM 20 C5 C B1213 244.565 122.057 -11.989 1.00 66.62 C
ATOM 21 C6 C B1213 245.802 121.556 -11.913 1.00 68.66 C
ATOM 22 P A B1214 250.019 121.255 -15.903 1.00 75.76 P
ATOM 23 OP1 A B1214 248.649 120.901 -16.353 1.00 75.67 O
ATOM 24 OP2 A B1214 251.193 120.593 -16.556 1.00 79.09 O
ATOM 25 O5' A B1214 250.209 122.825 -16.016 1.00 74.41 O
TER
Atoms:
OP1: (247.136,109.127,-12.880)
OP2: (249.519,109.912,-12.226)
C3': (246.400,114.153,-12.553)
C1': (247.226,114.765,-10.417)
C5': (246.112,111.711,-11.852)
O6: (253.163,115.602,-9.836)
O4': (246.678,113.461,-10.324)
C8: (249.433,113.520,-10.276)
C2: (250.364,117.796,-9.985)
C6: (251.977,115.949,-9.919)
C5: (250.823,115.125,-10.060)
C4: (249.582,115.721,-10.152)
P: (248.045,109.907,-11.981)
C4': (245.909,113.164,-11.511)
C2': (246.738,115.386,-11.725)
O2': (245.615,116.184,-11.442)
N1: (251.642,117.301,-9.887)
N2: (250.246,119.121,-9.934)
N3: (249.281,117.041,-10.124)
N7: (250.713,113.741,-10.141)
N9: (248.682,114.673,-10.290)
O5': (247.513,111.418,-11.949)
O3': (245.389,114.427,-13.511)
OP2: (249.519,109.912,-12.226)
C3': (246.400,114.153,-12.553)
C1': (247.226,114.765,-10.417)
C5': (246.112,111.711,-11.852)
O6: (253.163,115.602,-9.836)
O4': (246.678,113.461,-10.324)
C8: (249.433,113.520,-10.276)
C2: (250.364,117.796,-9.985)
C6: (251.977,115.949,-9.919)
C5: (250.823,115.125,-10.060)
C4: (249.582,115.721,-10.152)
P: (248.045,109.907,-11.981)
C4': (245.909,113.164,-11.511)
C2': (246.738,115.386,-11.725)
O2': (245.615,116.184,-11.442)
N1: (251.642,117.301,-9.887)
N2: (250.246,119.121,-9.934)
N3: (249.281,117.041,-10.124)
N7: (250.713,113.741,-10.141)
N9: (248.682,114.673,-10.290)
O5': (247.513,111.418,-11.949)
O3': (245.389,114.427,-13.511)
C2: (245.014,119.426,-12.679)
OP1: (249.470,125.131,-10.022)
OP2: (246.975,125.007,-10.573)
C4: (243.537,121.199,-12.455)
O5': (248.559,123.280,-11.451)
C3': (248.976,121.076,-13.499)
C1': (247.449,119.734,-12.266)
O4': (248.233,120.476,-11.344)
C5': (249.693,122.387,-11.377)
P: (248.245,124.310,-10.267)
O2: (245.256,118.240,-12.955)
C4': (249.367,121.060,-12.026)
C2': (248.137,119.813,-13.634)
O2': (248.941,118.669,-13.834)
N1: (246.062,120.265,-12.271)
N3: (243.765,119.929,-12.763)
N4: (242.307,121.663,-12.611)
C6: (245.802,121.556,-11.913)
C5: (244.565,122.057,-11.989)
O3': (250.126,120.972,-14.323)
OP1: (249.470,125.131,-10.022)
OP2: (246.975,125.007,-10.573)
C4: (243.537,121.199,-12.455)
O5': (248.559,123.280,-11.451)
C3': (248.976,121.076,-13.499)
C1': (247.449,119.734,-12.266)
O4': (248.233,120.476,-11.344)
C5': (249.693,122.387,-11.377)
P: (248.245,124.310,-10.267)
O2: (245.256,118.240,-12.955)
C4': (249.367,121.060,-12.026)
C2': (248.137,119.813,-13.634)
O2': (248.941,118.669,-13.834)
N1: (246.062,120.265,-12.271)
N3: (243.765,119.929,-12.763)
N4: (242.307,121.663,-12.611)
C6: (245.802,121.556,-11.913)
C5: (244.565,122.057,-11.989)
O3': (250.126,120.972,-14.323)
Image (generated by PyMOL):