Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y8Y:B9:B8
Extra
PDB:
ATOM 1 O3' C A 8 19.526 -7.477 -10.816 1.00111.26 O
ATOM 2 P G A 9 19.810 -7.548 -12.399 1.00124.23 P
ATOM 3 OP1 G A 9 20.862 -6.548 -12.701 1.00122.37 O
ATOM 4 OP2 G A 9 20.070 -8.972 -12.723 1.00123.88 O
ATOM 5 O5' G A 9 18.420 -7.090 -13.043 1.00 46.83 O
ATOM 6 C5' G A 9 17.467 -8.049 -13.509 1.00 30.93 C
ATOM 7 C4' G A 9 16.493 -7.440 -14.496 1.00 23.78 C
ATOM 8 O4' G A 9 16.090 -6.126 -14.009 1.00 19.38 O
ATOM 9 C3' G A 9 17.055 -7.203 -15.907 1.00 19.74 C
ATOM 10 O3' G A 9 15.993 -7.269 -16.870 1.00 23.54 O
ATOM 11 C2' G A 9 17.510 -5.768 -15.806 1.00 17.94 C
ATOM 12 O2' G A 9 17.689 -5.122 -17.044 1.00 19.08 O
ATOM 13 C1' G A 9 16.360 -5.173 -15.017 1.00 18.83 C
ATOM 14 N9 G A 9 16.670 -3.883 -14.413 1.00 18.06 N
ATOM 15 C8 G A 9 15.976 -2.728 -14.685 1.00 22.32 C
ATOM 16 N7 G A 9 16.472 -1.681 -14.103 1.00 20.61 N
ATOM 17 C5 G A 9 17.573 -2.167 -13.427 1.00 19.21 C
ATOM 18 C6 G A 9 18.495 -1.473 -12.627 1.00 18.83 C
ATOM 19 O6 G A 9 18.522 -0.270 -12.353 1.00 29.44 O
ATOM 20 N1 G A 9 19.465 -2.329 -12.116 1.00 23.81 N
ATOM 21 C2 G A 9 19.524 -3.671 -12.362 1.00 28.62 C
ATOM 22 N2 G A 9 20.540 -4.315 -11.790 1.00 30.70 N
ATOM 23 N3 G A 9 18.671 -4.342 -13.115 1.00 23.64 N
ATOM 24 C4 G A 9 17.722 -3.524 -13.615 1.00 20.30 C
ATOM 25 P U A 10 16.039 -8.299 -18.100 1.00 23.09 P
ATOM 26 OP1 U A 10 17.467 -8.575 -18.409 1.00 21.12 O
ATOM 27 OP2 U A 10 15.170 -7.736 -19.173 1.00 22.21 O
ATOM 28 O5' U A 10 15.363 -9.607 -17.488 1.00 24.21 O
TER
ATOM 1 O3' G B 7 24.996 -3.857 -10.712 1.00 88.27 O
ATOM 2 P C B 8 23.505 -4.446 -10.950 1.00106.84 P
ATOM 3 OP1 C B 8 23.616 -5.484 -12.003 1.00107.24 O
ATOM 4 OP2 C B 8 22.607 -3.296 -11.185 1.00108.58 O
ATOM 5 O5' C B 8 23.144 -5.134 -9.552 1.00108.86 O
ATOM 6 C5' C B 8 21.806 -5.099 -9.035 1.00107.80 C
ATOM 7 C4' C B 8 21.059 -6.400 -9.275 1.00107.38 C
ATOM 8 O4' C B 8 20.674 -6.982 -7.991 1.00103.79 O
ATOM 9 C3' C B 8 19.750 -6.272 -10.075 1.00108.01 C
ATOM 10 O3' C B 8 19.526 -7.477 -10.816 1.00111.26 O
ATOM 11 C2' C B 8 18.712 -6.190 -8.964 1.00103.06 C
ATOM 12 O2' C B 8 17.394 -6.504 -9.364 1.00100.40 O
ATOM 13 C1' C B 8 19.279 -7.226 -8.008 1.00100.95 C
ATOM 14 N1 C B 8 18.743 -7.175 -6.626 1.00 94.38 N
ATOM 15 C2 C B 8 18.836 -6.053 -5.796 1.00 91.14 C
ATOM 16 O2 C B 8 19.397 -5.029 -6.214 1.00 90.37 O
ATOM 17 N3 C B 8 18.306 -6.126 -4.546 1.00 87.52 N
ATOM 18 C4 C B 8 17.707 -7.246 -4.123 1.00 86.59 C
ATOM 19 N4 C B 8 17.201 -7.274 -2.888 1.00 86.18 N
ATOM 20 C5 C B 8 17.598 -8.398 -4.948 1.00 86.16 C
ATOM 21 C6 C B 8 18.124 -8.309 -6.172 1.00 89.11 C
ATOM 22 P G B 9 19.810 -7.548 -12.399 1.00124.23 P
ATOM 23 OP1 G B 9 20.862 -6.548 -12.701 1.00122.37 O
ATOM 24 OP2 G B 9 20.070 -8.972 -12.723 1.00123.88 O
ATOM 25 O5' G B 9 18.420 -7.090 -13.043 1.00 46.83 O
TER
ATOM 2 P G A 9 19.810 -7.548 -12.399 1.00124.23 P
ATOM 3 OP1 G A 9 20.862 -6.548 -12.701 1.00122.37 O
ATOM 4 OP2 G A 9 20.070 -8.972 -12.723 1.00123.88 O
ATOM 5 O5' G A 9 18.420 -7.090 -13.043 1.00 46.83 O
ATOM 6 C5' G A 9 17.467 -8.049 -13.509 1.00 30.93 C
ATOM 7 C4' G A 9 16.493 -7.440 -14.496 1.00 23.78 C
ATOM 8 O4' G A 9 16.090 -6.126 -14.009 1.00 19.38 O
ATOM 9 C3' G A 9 17.055 -7.203 -15.907 1.00 19.74 C
ATOM 10 O3' G A 9 15.993 -7.269 -16.870 1.00 23.54 O
ATOM 11 C2' G A 9 17.510 -5.768 -15.806 1.00 17.94 C
ATOM 12 O2' G A 9 17.689 -5.122 -17.044 1.00 19.08 O
ATOM 13 C1' G A 9 16.360 -5.173 -15.017 1.00 18.83 C
ATOM 14 N9 G A 9 16.670 -3.883 -14.413 1.00 18.06 N
ATOM 15 C8 G A 9 15.976 -2.728 -14.685 1.00 22.32 C
ATOM 16 N7 G A 9 16.472 -1.681 -14.103 1.00 20.61 N
ATOM 17 C5 G A 9 17.573 -2.167 -13.427 1.00 19.21 C
ATOM 18 C6 G A 9 18.495 -1.473 -12.627 1.00 18.83 C
ATOM 19 O6 G A 9 18.522 -0.270 -12.353 1.00 29.44 O
ATOM 20 N1 G A 9 19.465 -2.329 -12.116 1.00 23.81 N
ATOM 21 C2 G A 9 19.524 -3.671 -12.362 1.00 28.62 C
ATOM 22 N2 G A 9 20.540 -4.315 -11.790 1.00 30.70 N
ATOM 23 N3 G A 9 18.671 -4.342 -13.115 1.00 23.64 N
ATOM 24 C4 G A 9 17.722 -3.524 -13.615 1.00 20.30 C
ATOM 25 P U A 10 16.039 -8.299 -18.100 1.00 23.09 P
ATOM 26 OP1 U A 10 17.467 -8.575 -18.409 1.00 21.12 O
ATOM 27 OP2 U A 10 15.170 -7.736 -19.173 1.00 22.21 O
ATOM 28 O5' U A 10 15.363 -9.607 -17.488 1.00 24.21 O
TER
ATOM 1 O3' G B 7 24.996 -3.857 -10.712 1.00 88.27 O
ATOM 2 P C B 8 23.505 -4.446 -10.950 1.00106.84 P
ATOM 3 OP1 C B 8 23.616 -5.484 -12.003 1.00107.24 O
ATOM 4 OP2 C B 8 22.607 -3.296 -11.185 1.00108.58 O
ATOM 5 O5' C B 8 23.144 -5.134 -9.552 1.00108.86 O
ATOM 6 C5' C B 8 21.806 -5.099 -9.035 1.00107.80 C
ATOM 7 C4' C B 8 21.059 -6.400 -9.275 1.00107.38 C
ATOM 8 O4' C B 8 20.674 -6.982 -7.991 1.00103.79 O
ATOM 9 C3' C B 8 19.750 -6.272 -10.075 1.00108.01 C
ATOM 10 O3' C B 8 19.526 -7.477 -10.816 1.00111.26 O
ATOM 11 C2' C B 8 18.712 -6.190 -8.964 1.00103.06 C
ATOM 12 O2' C B 8 17.394 -6.504 -9.364 1.00100.40 O
ATOM 13 C1' C B 8 19.279 -7.226 -8.008 1.00100.95 C
ATOM 14 N1 C B 8 18.743 -7.175 -6.626 1.00 94.38 N
ATOM 15 C2 C B 8 18.836 -6.053 -5.796 1.00 91.14 C
ATOM 16 O2 C B 8 19.397 -5.029 -6.214 1.00 90.37 O
ATOM 17 N3 C B 8 18.306 -6.126 -4.546 1.00 87.52 N
ATOM 18 C4 C B 8 17.707 -7.246 -4.123 1.00 86.59 C
ATOM 19 N4 C B 8 17.201 -7.274 -2.888 1.00 86.18 N
ATOM 20 C5 C B 8 17.598 -8.398 -4.948 1.00 86.16 C
ATOM 21 C6 C B 8 18.124 -8.309 -6.172 1.00 89.11 C
ATOM 22 P G B 9 19.810 -7.548 -12.399 1.00124.23 P
ATOM 23 OP1 G B 9 20.862 -6.548 -12.701 1.00122.37 O
ATOM 24 OP2 G B 9 20.070 -8.972 -12.723 1.00123.88 O
ATOM 25 O5' G B 9 18.420 -7.090 -13.043 1.00 46.83 O
TER
Atoms:
OP1: (20.862,-6.548,-12.701)
OP2: (20.070,-8.972,-12.723)
C3': (17.055,-7.203,-15.907)
C1': (16.360,-5.173,-15.017)
C5': (17.467,-8.049,-13.509)
O6: (18.522,-0.270,-12.353)
O4': (16.090,-6.126,-14.009)
C8: (15.976,-2.728,-14.685)
C2: (19.524,-3.671,-12.362)
C6: (18.495,-1.473,-12.627)
C5: (17.573,-2.167,-13.427)
C4: (17.722,-3.524,-13.615)
P: (19.810,-7.548,-12.399)
C4': (16.493,-7.440,-14.496)
C2': (17.510,-5.768,-15.806)
O2': (17.689,-5.122,-17.044)
N1: (19.465,-2.329,-12.116)
N2: (20.540,-4.315,-11.790)
N3: (18.671,-4.342,-13.115)
N7: (16.472,-1.681,-14.103)
N9: (16.670,-3.883,-14.413)
O5': (18.420,-7.090,-13.043)
O3': (15.993,-7.269,-16.870)
OP2: (20.070,-8.972,-12.723)
C3': (17.055,-7.203,-15.907)
C1': (16.360,-5.173,-15.017)
C5': (17.467,-8.049,-13.509)
O6: (18.522,-0.270,-12.353)
O4': (16.090,-6.126,-14.009)
C8: (15.976,-2.728,-14.685)
C2: (19.524,-3.671,-12.362)
C6: (18.495,-1.473,-12.627)
C5: (17.573,-2.167,-13.427)
C4: (17.722,-3.524,-13.615)
P: (19.810,-7.548,-12.399)
C4': (16.493,-7.440,-14.496)
C2': (17.510,-5.768,-15.806)
O2': (17.689,-5.122,-17.044)
N1: (19.465,-2.329,-12.116)
N2: (20.540,-4.315,-11.790)
N3: (18.671,-4.342,-13.115)
N7: (16.472,-1.681,-14.103)
N9: (16.670,-3.883,-14.413)
O5': (18.420,-7.090,-13.043)
O3': (15.993,-7.269,-16.870)
C2: (18.836,-6.053,-5.796)
OP1: (23.616,-5.484,-12.003)
OP2: (22.607,-3.296,-11.185)
C4: (17.707,-7.246,-4.123)
O5': (23.144,-5.134,-9.552)
C3': (19.750,-6.272,-10.075)
C1': (19.279,-7.226,-8.008)
O4': (20.674,-6.982,-7.991)
C5': (21.806,-5.099,-9.035)
P: (23.505,-4.446,-10.950)
O2: (19.397,-5.029,-6.214)
C4': (21.059,-6.400,-9.275)
C2': (18.712,-6.190,-8.964)
O2': (17.394,-6.504,-9.364)
N1: (18.743,-7.175,-6.626)
N3: (18.306,-6.126,-4.546)
N4: (17.201,-7.274,-2.888)
C6: (18.124,-8.309,-6.172)
C5: (17.598,-8.398,-4.948)
O3': (19.526,-7.477,-10.816)
OP1: (23.616,-5.484,-12.003)
OP2: (22.607,-3.296,-11.185)
C4: (17.707,-7.246,-4.123)
O5': (23.144,-5.134,-9.552)
C3': (19.750,-6.272,-10.075)
C1': (19.279,-7.226,-8.008)
O4': (20.674,-6.982,-7.991)
C5': (21.806,-5.099,-9.035)
P: (23.505,-4.446,-10.950)
O2: (19.397,-5.029,-6.214)
C4': (21.059,-6.400,-9.275)
C2': (18.712,-6.190,-8.964)
O2': (17.394,-6.504,-9.364)
N1: (18.743,-7.175,-6.626)
N3: (18.306,-6.126,-4.546)
N4: (17.201,-7.274,-2.888)
C6: (18.124,-8.309,-6.172)
C5: (17.598,-8.398,-4.948)
O3': (19.526,-7.477,-10.816)
Image (generated by PyMOL):