Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2828:A2676
Extra
PDB:
ATOM 1 O3' G A2827 -45.146 -62.024 -46.537 1.00 73.01 O
ATOM 2 P G A2828 -44.541 -60.590 -46.881 1.00 78.56 P
ATOM 3 OP1 G A2828 -45.631 -59.597 -47.036 1.00 63.45 O
ATOM 4 OP2 G A2828 -43.581 -60.815 -47.980 1.00 73.09 O
ATOM 5 O5' G A2828 -43.742 -60.251 -45.541 1.00 58.84 O
ATOM 6 C5' G A2828 -44.484 -60.060 -44.357 1.00 64.22 C
ATOM 7 C4' G A2828 -43.544 -60.085 -43.182 1.00 52.03 C
ATOM 8 O4' G A2828 -42.735 -61.270 -43.267 1.00 49.75 O
ATOM 9 C3' G A2828 -42.504 -58.991 -43.212 1.00 56.76 C
ATOM 10 O3' G A2828 -43.093 -57.779 -42.796 1.00 59.75 O
ATOM 11 C2' G A2828 -41.513 -59.550 -42.203 1.00 60.36 C
ATOM 12 O2' G A2828 -41.929 -59.413 -40.862 1.00 69.71 O
ATOM 13 C1' G A2828 -41.520 -61.017 -42.604 1.00 56.75 C
ATOM 14 N9 G A2828 -40.469 -61.256 -43.563 1.00 68.48 N
ATOM 15 C8 G A2828 -40.606 -61.447 -44.912 1.00 69.37 C
ATOM 16 N7 G A2828 -39.464 -61.626 -45.520 1.00 76.48 N
ATOM 17 C5 G A2828 -38.518 -61.540 -44.505 1.00 71.85 C
ATOM 18 C6 G A2828 -37.112 -61.653 -44.560 1.00 70.46 C
ATOM 19 O6 G A2828 -36.398 -61.857 -45.552 1.00 81.10 O
ATOM 20 N1 G A2828 -36.542 -61.503 -43.301 1.00 71.17 N
ATOM 21 C2 G A2828 -37.243 -61.272 -42.141 1.00 69.70 C
ATOM 22 N2 G A2828 -36.522 -61.152 -41.017 1.00 74.63 N
ATOM 23 N3 G A2828 -38.561 -61.164 -42.077 1.00 68.43 N
ATOM 24 C4 G A2828 -39.126 -61.308 -43.295 1.00 72.27 C
ATOM 25 P U A2829 -42.907 -56.454 -43.678 1.00 76.12 P
ATOM 26 OP1 U A2829 -43.923 -55.480 -43.229 1.00 78.16 O
ATOM 27 OP2 U A2829 -42.857 -56.797 -45.114 1.00 71.04 O
ATOM 28 O5' U A2829 -41.465 -55.976 -43.184 1.00 69.62 O
TER
ATOM 1 O3' C B2675 -36.347 -63.286 -36.245 1.00 74.40 O
ATOM 2 P C B2676 -35.095 -62.487 -35.639 1.00 62.05 P
ATOM 3 OP1 C B2676 -33.894 -63.226 -36.071 1.00 86.88 O
ATOM 4 OP2 C B2676 -35.314 -62.257 -34.192 1.00 63.60 O
ATOM 5 O5' C B2676 -35.124 -61.084 -36.410 1.00 62.60 O
ATOM 6 C5' C B2676 -34.738 -61.017 -37.780 1.00 64.02 C
ATOM 7 C4' C B2676 -35.176 -59.717 -38.436 1.00 69.11 C
ATOM 8 O4' C B2676 -36.592 -59.506 -38.228 1.00 77.09 O
ATOM 9 C3' C B2676 -34.586 -58.433 -37.882 1.00 64.24 C
ATOM 10 O3' C B2676 -33.258 -58.255 -38.325 1.00 64.88 O
ATOM 11 C2' C B2676 -35.522 -57.434 -38.548 1.00 73.75 C
ATOM 12 O2' C B2676 -35.275 -57.302 -39.932 1.00 77.86 O
ATOM 13 C1' C B2676 -36.867 -58.117 -38.338 1.00 78.46 C
ATOM 14 N1 C B2676 -37.574 -57.603 -37.119 1.00 75.50 N
ATOM 15 C2 C B2676 -38.261 -56.392 -37.205 1.00 65.75 C
ATOM 16 O2 C B2676 -38.263 -55.805 -38.286 1.00 70.52 O
ATOM 17 N3 C B2676 -38.900 -55.907 -36.116 1.00 65.65 N
ATOM 18 C4 C B2676 -38.863 -56.594 -34.976 1.00 70.35 C
ATOM 19 N4 C B2676 -39.501 -56.092 -33.921 1.00 69.81 N
ATOM 20 C5 C B2676 -38.169 -57.831 -34.855 1.00 74.99 C
ATOM 21 C6 C B2676 -37.540 -58.295 -35.942 1.00 75.82 C
ATOM 22 P A B2677 -32.193 -57.511 -37.390 1.00 87.93 P
ATOM 23 OP1 A B2677 -30.852 -57.720 -37.981 1.00 97.34 O
ATOM 24 OP2 A B2677 -32.459 -57.889 -35.985 1.00 85.04 O
ATOM 25 O5' A B2677 -32.603 -55.979 -37.562 1.00 78.49 O
TER
ATOM 2 P G A2828 -44.541 -60.590 -46.881 1.00 78.56 P
ATOM 3 OP1 G A2828 -45.631 -59.597 -47.036 1.00 63.45 O
ATOM 4 OP2 G A2828 -43.581 -60.815 -47.980 1.00 73.09 O
ATOM 5 O5' G A2828 -43.742 -60.251 -45.541 1.00 58.84 O
ATOM 6 C5' G A2828 -44.484 -60.060 -44.357 1.00 64.22 C
ATOM 7 C4' G A2828 -43.544 -60.085 -43.182 1.00 52.03 C
ATOM 8 O4' G A2828 -42.735 -61.270 -43.267 1.00 49.75 O
ATOM 9 C3' G A2828 -42.504 -58.991 -43.212 1.00 56.76 C
ATOM 10 O3' G A2828 -43.093 -57.779 -42.796 1.00 59.75 O
ATOM 11 C2' G A2828 -41.513 -59.550 -42.203 1.00 60.36 C
ATOM 12 O2' G A2828 -41.929 -59.413 -40.862 1.00 69.71 O
ATOM 13 C1' G A2828 -41.520 -61.017 -42.604 1.00 56.75 C
ATOM 14 N9 G A2828 -40.469 -61.256 -43.563 1.00 68.48 N
ATOM 15 C8 G A2828 -40.606 -61.447 -44.912 1.00 69.37 C
ATOM 16 N7 G A2828 -39.464 -61.626 -45.520 1.00 76.48 N
ATOM 17 C5 G A2828 -38.518 -61.540 -44.505 1.00 71.85 C
ATOM 18 C6 G A2828 -37.112 -61.653 -44.560 1.00 70.46 C
ATOM 19 O6 G A2828 -36.398 -61.857 -45.552 1.00 81.10 O
ATOM 20 N1 G A2828 -36.542 -61.503 -43.301 1.00 71.17 N
ATOM 21 C2 G A2828 -37.243 -61.272 -42.141 1.00 69.70 C
ATOM 22 N2 G A2828 -36.522 -61.152 -41.017 1.00 74.63 N
ATOM 23 N3 G A2828 -38.561 -61.164 -42.077 1.00 68.43 N
ATOM 24 C4 G A2828 -39.126 -61.308 -43.295 1.00 72.27 C
ATOM 25 P U A2829 -42.907 -56.454 -43.678 1.00 76.12 P
ATOM 26 OP1 U A2829 -43.923 -55.480 -43.229 1.00 78.16 O
ATOM 27 OP2 U A2829 -42.857 -56.797 -45.114 1.00 71.04 O
ATOM 28 O5' U A2829 -41.465 -55.976 -43.184 1.00 69.62 O
TER
ATOM 1 O3' C B2675 -36.347 -63.286 -36.245 1.00 74.40 O
ATOM 2 P C B2676 -35.095 -62.487 -35.639 1.00 62.05 P
ATOM 3 OP1 C B2676 -33.894 -63.226 -36.071 1.00 86.88 O
ATOM 4 OP2 C B2676 -35.314 -62.257 -34.192 1.00 63.60 O
ATOM 5 O5' C B2676 -35.124 -61.084 -36.410 1.00 62.60 O
ATOM 6 C5' C B2676 -34.738 -61.017 -37.780 1.00 64.02 C
ATOM 7 C4' C B2676 -35.176 -59.717 -38.436 1.00 69.11 C
ATOM 8 O4' C B2676 -36.592 -59.506 -38.228 1.00 77.09 O
ATOM 9 C3' C B2676 -34.586 -58.433 -37.882 1.00 64.24 C
ATOM 10 O3' C B2676 -33.258 -58.255 -38.325 1.00 64.88 O
ATOM 11 C2' C B2676 -35.522 -57.434 -38.548 1.00 73.75 C
ATOM 12 O2' C B2676 -35.275 -57.302 -39.932 1.00 77.86 O
ATOM 13 C1' C B2676 -36.867 -58.117 -38.338 1.00 78.46 C
ATOM 14 N1 C B2676 -37.574 -57.603 -37.119 1.00 75.50 N
ATOM 15 C2 C B2676 -38.261 -56.392 -37.205 1.00 65.75 C
ATOM 16 O2 C B2676 -38.263 -55.805 -38.286 1.00 70.52 O
ATOM 17 N3 C B2676 -38.900 -55.907 -36.116 1.00 65.65 N
ATOM 18 C4 C B2676 -38.863 -56.594 -34.976 1.00 70.35 C
ATOM 19 N4 C B2676 -39.501 -56.092 -33.921 1.00 69.81 N
ATOM 20 C5 C B2676 -38.169 -57.831 -34.855 1.00 74.99 C
ATOM 21 C6 C B2676 -37.540 -58.295 -35.942 1.00 75.82 C
ATOM 22 P A B2677 -32.193 -57.511 -37.390 1.00 87.93 P
ATOM 23 OP1 A B2677 -30.852 -57.720 -37.981 1.00 97.34 O
ATOM 24 OP2 A B2677 -32.459 -57.889 -35.985 1.00 85.04 O
ATOM 25 O5' A B2677 -32.603 -55.979 -37.562 1.00 78.49 O
TER
Atoms:
OP1: (-45.631,-59.597,-47.036)
OP2: (-43.581,-60.815,-47.980)
C3': (-42.504,-58.991,-43.212)
C1': (-41.520,-61.017,-42.604)
C5': (-44.484,-60.060,-44.357)
O6: (-36.398,-61.857,-45.552)
O4': (-42.735,-61.270,-43.267)
C8: (-40.606,-61.447,-44.912)
C2: (-37.243,-61.272,-42.141)
C6: (-37.112,-61.653,-44.560)
C5: (-38.518,-61.540,-44.505)
C4: (-39.126,-61.308,-43.295)
P: (-44.541,-60.590,-46.881)
C4': (-43.544,-60.085,-43.182)
C2': (-41.513,-59.550,-42.203)
O2': (-41.929,-59.413,-40.862)
N1: (-36.542,-61.503,-43.301)
N2: (-36.522,-61.152,-41.017)
N3: (-38.561,-61.164,-42.077)
N7: (-39.464,-61.626,-45.520)
N9: (-40.469,-61.256,-43.563)
O5': (-43.742,-60.251,-45.541)
O3': (-43.093,-57.779,-42.796)
OP2: (-43.581,-60.815,-47.980)
C3': (-42.504,-58.991,-43.212)
C1': (-41.520,-61.017,-42.604)
C5': (-44.484,-60.060,-44.357)
O6: (-36.398,-61.857,-45.552)
O4': (-42.735,-61.270,-43.267)
C8: (-40.606,-61.447,-44.912)
C2: (-37.243,-61.272,-42.141)
C6: (-37.112,-61.653,-44.560)
C5: (-38.518,-61.540,-44.505)
C4: (-39.126,-61.308,-43.295)
P: (-44.541,-60.590,-46.881)
C4': (-43.544,-60.085,-43.182)
C2': (-41.513,-59.550,-42.203)
O2': (-41.929,-59.413,-40.862)
N1: (-36.542,-61.503,-43.301)
N2: (-36.522,-61.152,-41.017)
N3: (-38.561,-61.164,-42.077)
N7: (-39.464,-61.626,-45.520)
N9: (-40.469,-61.256,-43.563)
O5': (-43.742,-60.251,-45.541)
O3': (-43.093,-57.779,-42.796)
C2: (-38.261,-56.392,-37.205)
OP1: (-33.894,-63.226,-36.071)
OP2: (-35.314,-62.257,-34.192)
C4: (-38.863,-56.594,-34.976)
O5': (-35.124,-61.084,-36.410)
C3': (-34.586,-58.433,-37.882)
C1': (-36.867,-58.117,-38.338)
O4': (-36.592,-59.506,-38.228)
C5': (-34.738,-61.017,-37.780)
P: (-35.095,-62.487,-35.639)
O2: (-38.263,-55.805,-38.286)
C4': (-35.176,-59.717,-38.436)
C2': (-35.522,-57.434,-38.548)
O2': (-35.275,-57.302,-39.932)
N1: (-37.574,-57.603,-37.119)
N3: (-38.900,-55.907,-36.116)
N4: (-39.501,-56.092,-33.921)
C6: (-37.540,-58.295,-35.942)
C5: (-38.169,-57.831,-34.855)
O3': (-33.258,-58.255,-38.325)
OP1: (-33.894,-63.226,-36.071)
OP2: (-35.314,-62.257,-34.192)
C4: (-38.863,-56.594,-34.976)
O5': (-35.124,-61.084,-36.410)
C3': (-34.586,-58.433,-37.882)
C1': (-36.867,-58.117,-38.338)
O4': (-36.592,-59.506,-38.228)
C5': (-34.738,-61.017,-37.780)
P: (-35.095,-62.487,-35.639)
O2: (-38.263,-55.805,-38.286)
C4': (-35.176,-59.717,-38.436)
C2': (-35.522,-57.434,-38.548)
O2': (-35.275,-57.302,-39.932)
N1: (-37.574,-57.603,-37.119)
N3: (-38.900,-55.907,-36.116)
N4: (-39.501,-56.092,-33.921)
C6: (-37.540,-58.295,-35.942)
C5: (-38.169,-57.831,-34.855)
O3': (-33.258,-58.255,-38.325)
Image (generated by PyMOL):