ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2749:A2596

Extra

PDB:
ATOM 1 O3' G A2748 41.802 -61.958 45.124 1.00 55.86 O
ATOM 2 P G A2749 41.323 -60.447 45.430 1.00 60.03 P
ATOM 3 OP1 G A2749 42.553 -59.637 45.618 1.00 56.52 O
ATOM 4 OP2 G A2749 40.301 -60.463 46.501 1.00 60.85 O
ATOM 5 O5' G A2749 40.630 -60.021 44.062 1.00 53.47 O
ATOM 6 C5' G A2749 41.243 -60.378 42.824 1.00 48.31 C
ATOM 7 C4' G A2749 40.318 -60.113 41.671 1.00 49.52 C
ATOM 8 O4' G A2749 39.327 -61.160 41.534 1.00 44.88 O
ATOM 9 C3' G A2749 39.498 -58.851 41.803 1.00 51.64 C
ATOM 10 O3' G A2749 40.229 -57.686 41.500 1.00 47.10 O
ATOM 11 C2' G A2749 38.341 -59.093 40.845 1.00 56.02 C
ATOM 12 O2' G A2749 38.619 -58.717 39.505 1.00 48.03 O
ATOM 13 C1' G A2749 38.135 -60.606 40.987 1.00 55.20 C
ATOM 14 N9 G A2749 37.003 -60.893 41.868 1.00 61.08 N
ATOM 15 C8 G A2749 37.009 -61.009 43.238 1.00 62.43 C
ATOM 16 N7 G A2749 35.816 -61.150 43.748 1.00 61.14 N
ATOM 17 C5 G A2749 34.969 -61.145 42.649 1.00 63.03 C
ATOM 18 C6 G A2749 33.551 -61.221 42.578 1.00 67.09 C
ATOM 19 O6 G A2749 32.731 -61.268 43.516 1.00 67.44 O
ATOM 20 N1 G A2749 33.104 -61.214 41.256 1.00 62.21 N
ATOM 21 C2 G A2749 33.918 -61.137 40.142 1.00 60.49 C
ATOM 22 N2 G A2749 33.308 -61.202 38.940 1.00 58.96 N
ATOM 23 N3 G A2749 35.234 -61.021 40.200 1.00 59.39 N
ATOM 24 C4 G A2749 35.688 -61.031 41.476 1.00 60.31 C
ATOM 25 P U A2750 39.602 -56.267 41.885 1.00 48.61 P
ATOM 26 OP1 U A2750 40.653 -55.224 42.030 1.00 50.08 O
ATOM 27 OP2 U A2750 38.667 -56.522 43.006 1.00 49.66 O
ATOM 28 O5' U A2750 38.716 -55.917 40.616 1.00 53.07 O
TER

ATOM 1 O3' C B2595 35.241 -63.843 29.603 1.00 43.06 O
ATOM 2 P C B2596 34.445 -65.127 30.164 1.00 59.63 P
ATOM 3 OP1 C B2596 34.951 -66.408 29.600 1.00 48.43 O
ATOM 4 OP2 C B2596 33.002 -64.776 30.039 1.00 60.63 O
ATOM 5 O5' C B2596 34.793 -65.137 31.716 1.00 51.01 O
ATOM 6 C5' C B2596 35.895 -64.406 32.210 1.00 43.58 C
ATOM 7 C4' C B2596 35.586 -63.853 33.574 1.00 46.63 C
ATOM 8 O4' C B2596 36.821 -63.311 34.122 1.00 45.09 O
ATOM 9 C3' C B2596 34.565 -62.713 33.644 1.00 52.89 C
ATOM 10 O3' C B2596 33.200 -63.175 33.749 1.00 60.64 O
ATOM 11 C2' C B2596 35.026 -61.957 34.888 1.00 55.93 C
ATOM 12 O2' C B2596 34.607 -62.582 36.092 1.00 59.32 O
ATOM 13 C1' C B2596 36.553 -62.084 34.778 1.00 47.55 C
ATOM 14 N1 C B2596 37.169 -61.008 33.965 1.00 46.32 N
ATOM 15 C2 C B2596 37.386 -59.730 34.526 1.00 51.57 C
ATOM 16 O2 C B2596 37.077 -59.520 35.708 1.00 59.32 O
ATOM 17 N3 C B2596 37.932 -58.762 33.758 1.00 50.09 N
ATOM 18 C4 C B2596 38.256 -59.018 32.490 1.00 48.95 C
ATOM 19 N4 C B2596 38.806 -58.033 31.770 1.00 41.28 N
ATOM 20 C5 C B2596 38.042 -60.297 31.899 1.00 45.66 C
ATOM 21 C6 C B2596 37.509 -61.251 32.663 1.00 43.07 C
ATOM 22 P C B2597 31.961 -62.228 33.272 1.00 64.57 P
ATOM 23 OP1 C B2597 30.693 -62.931 33.585 1.00 64.29 O
ATOM 24 OP2 C B2597 32.213 -61.815 31.858 1.00 61.97 O
ATOM 25 O5' C B2597 32.037 -60.950 34.231 1.00 56.14 O
TER

Atoms:
OP1: (42.553,-59.637,45.618)
OP2: (40.301,-60.463,46.501)
C3': (39.498,-58.851,41.803)
C1': (38.135,-60.606,40.987)
C5': (41.243,-60.378,42.824)
O6: (32.731,-61.268,43.516)
O4': (39.327,-61.160,41.534)
C8: (37.009,-61.009,43.238)
C2: (33.918,-61.137,40.142)
C6: (33.551,-61.221,42.578)
C5: (34.969,-61.145,42.649)
C4: (35.688,-61.031,41.476)
P: (41.323,-60.447,45.430)
C4': (40.318,-60.113,41.671)
C2': (38.341,-59.093,40.845)
O2': (38.619,-58.717,39.505)
N1: (33.104,-61.214,41.256)
N2: (33.308,-61.202,38.940)
N3: (35.234,-61.021,40.200)
N7: (35.816,-61.150,43.748)
N9: (37.003,-60.893,41.868)
O5': (40.630,-60.021,44.062)
O3': (40.229,-57.686,41.500)
C2: (37.386,-59.730,34.526)
OP1: (34.951,-66.408,29.600)
OP2: (33.002,-64.776,30.039)
C4: (38.256,-59.018,32.490)
O5': (34.793,-65.137,31.716)
C3': (34.565,-62.713,33.644)
C1': (36.553,-62.084,34.778)
O4': (36.821,-63.311,34.122)
C5': (35.895,-64.406,32.210)
P: (34.445,-65.127,30.164)
O2: (37.077,-59.520,35.708)
C4': (35.586,-63.853,33.574)
C2': (35.026,-61.957,34.888)
O2': (34.607,-62.582,36.092)
N1: (37.169,-61.008,33.965)
N3: (37.932,-58.762,33.758)
N4: (38.806,-58.033,31.770)
C6: (37.509,-61.251,32.663)
C5: (38.042,-60.297,31.899)
O3': (33.200,-63.175,33.749)
Image (generated by PyMOL):
PyMOL image
show in jmol