Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2219:A2111
Extra
PDB:
ATOM 1 O3' A A2218 125.140 -43.218 -39.688 1.00 32.96 O
ATOM 2 P G A2219 124.938 -42.757 -41.197 1.00 50.45 P
ATOM 3 OP1 G A2219 123.612 -43.254 -41.637 1.00 43.58 O
ATOM 4 OP2 G A2219 126.140 -43.170 -41.953 1.00 39.69 O
ATOM 5 O5' G A2219 124.893 -41.185 -41.047 1.00 38.01 O
ATOM 6 C5' G A2219 123.930 -40.574 -40.221 1.00 38.53 C
ATOM 7 C4' G A2219 123.980 -39.095 -40.373 1.00 44.43 C
ATOM 8 O4' G A2219 124.934 -38.562 -39.442 1.00 51.33 O
ATOM 9 C3' G A2219 124.436 -38.605 -41.740 1.00 45.14 C
ATOM 10 O3' G A2219 123.357 -38.477 -42.639 1.00 49.93 O
ATOM 11 C2' G A2219 125.135 -37.286 -41.444 1.00 44.18 C
ATOM 12 O2' G A2219 124.196 -36.219 -41.401 1.00 51.40 O
ATOM 13 C1' G A2219 125.679 -37.525 -40.034 1.00 52.32 C
ATOM 14 N9 G A2219 127.106 -37.918 -40.031 1.00 49.09 N
ATOM 15 C8 G A2219 127.793 -38.812 -40.824 1.00 50.37 C
ATOM 16 N7 G A2219 129.068 -38.926 -40.522 1.00 43.94 N
ATOM 17 C5 G A2219 129.227 -38.058 -39.452 1.00 47.28 C
ATOM 18 C6 G A2219 130.384 -37.726 -38.702 1.00 47.56 C
ATOM 19 O6 G A2219 131.533 -38.160 -38.846 1.00 46.36 O
ATOM 20 N1 G A2219 130.087 -36.798 -37.703 1.00 46.52 N
ATOM 21 C2 G A2219 128.842 -36.260 -37.477 1.00 43.26 C
ATOM 22 N2 G A2219 128.734 -35.378 -36.486 1.00 47.34 N
ATOM 23 N3 G A2219 127.765 -36.538 -38.170 1.00 43.12 N
ATOM 24 C4 G A2219 128.031 -37.441 -39.134 1.00 47.08 C
ATOM 25 P U A2220 123.601 -38.457 -44.217 1.00 47.38 P
ATOM 26 OP1 U A2220 124.997 -38.886 -44.455 1.00 72.29 O
ATOM 27 OP2 U A2220 123.176 -37.129 -44.695 1.00 51.62 O
ATOM 28 O5' U A2220 122.610 -39.585 -44.724 1.00 37.76 O
TER
ATOM 1 O3' G B2110 127.137 -35.796 -30.001 1.00 42.96 O
ATOM 2 P C B2111 126.020 -34.906 -30.707 1.00 42.00 P
ATOM 3 OP1 C B2111 126.665 -33.639 -31.150 1.00 48.09 O
ATOM 4 OP2 C B2111 124.879 -34.834 -29.771 1.00 37.67 O
ATOM 5 O5' C B2111 125.639 -35.801 -31.971 1.00 36.29 O
ATOM 6 C5' C B2111 126.639 -36.498 -32.694 1.00 31.78 C
ATOM 7 C4' C B2111 126.111 -37.036 -34.002 1.00 37.71 C
ATOM 8 O4' C B2111 125.533 -38.349 -33.796 1.00 39.99 O
ATOM 9 C3' C B2111 125.000 -36.235 -34.666 1.00 36.87 C
ATOM 10 O3' C B2111 125.478 -35.156 -35.438 1.00 32.03 O
ATOM 11 C2' C B2111 124.292 -37.288 -35.497 1.00 49.38 C
ATOM 12 O2' C B2111 125.028 -37.566 -36.676 1.00 47.49 O
ATOM 13 C1' C B2111 124.380 -38.501 -34.586 1.00 46.66 C
ATOM 14 N1 C B2111 123.218 -38.598 -33.685 1.00 46.17 N
ATOM 15 C2 C B2111 122.083 -39.274 -34.125 1.00 43.05 C
ATOM 16 O2 C B2111 122.090 -39.756 -35.277 1.00 43.79 O
ATOM 17 N3 C B2111 121.034 -39.377 -33.277 1.00 39.00 N
ATOM 18 C4 C B2111 121.097 -38.838 -32.063 1.00 39.17 C
ATOM 19 N4 C B2111 120.049 -38.955 -31.263 1.00 38.98 N
ATOM 20 C5 C B2111 122.241 -38.148 -31.596 1.00 46.05 C
ATOM 21 C6 C B2111 123.272 -38.053 -32.434 1.00 42.09 C
ATOM 22 P G B2112 124.499 -33.953 -35.812 1.00 52.32 P
ATOM 23 OP1 G B2112 125.273 -33.020 -36.663 1.00 53.67 O
ATOM 24 OP2 G B2112 123.913 -33.448 -34.537 1.00 52.20 O
ATOM 25 O5' G B2112 123.364 -34.664 -36.674 1.00 48.14 O
TER
ATOM 2 P G A2219 124.938 -42.757 -41.197 1.00 50.45 P
ATOM 3 OP1 G A2219 123.612 -43.254 -41.637 1.00 43.58 O
ATOM 4 OP2 G A2219 126.140 -43.170 -41.953 1.00 39.69 O
ATOM 5 O5' G A2219 124.893 -41.185 -41.047 1.00 38.01 O
ATOM 6 C5' G A2219 123.930 -40.574 -40.221 1.00 38.53 C
ATOM 7 C4' G A2219 123.980 -39.095 -40.373 1.00 44.43 C
ATOM 8 O4' G A2219 124.934 -38.562 -39.442 1.00 51.33 O
ATOM 9 C3' G A2219 124.436 -38.605 -41.740 1.00 45.14 C
ATOM 10 O3' G A2219 123.357 -38.477 -42.639 1.00 49.93 O
ATOM 11 C2' G A2219 125.135 -37.286 -41.444 1.00 44.18 C
ATOM 12 O2' G A2219 124.196 -36.219 -41.401 1.00 51.40 O
ATOM 13 C1' G A2219 125.679 -37.525 -40.034 1.00 52.32 C
ATOM 14 N9 G A2219 127.106 -37.918 -40.031 1.00 49.09 N
ATOM 15 C8 G A2219 127.793 -38.812 -40.824 1.00 50.37 C
ATOM 16 N7 G A2219 129.068 -38.926 -40.522 1.00 43.94 N
ATOM 17 C5 G A2219 129.227 -38.058 -39.452 1.00 47.28 C
ATOM 18 C6 G A2219 130.384 -37.726 -38.702 1.00 47.56 C
ATOM 19 O6 G A2219 131.533 -38.160 -38.846 1.00 46.36 O
ATOM 20 N1 G A2219 130.087 -36.798 -37.703 1.00 46.52 N
ATOM 21 C2 G A2219 128.842 -36.260 -37.477 1.00 43.26 C
ATOM 22 N2 G A2219 128.734 -35.378 -36.486 1.00 47.34 N
ATOM 23 N3 G A2219 127.765 -36.538 -38.170 1.00 43.12 N
ATOM 24 C4 G A2219 128.031 -37.441 -39.134 1.00 47.08 C
ATOM 25 P U A2220 123.601 -38.457 -44.217 1.00 47.38 P
ATOM 26 OP1 U A2220 124.997 -38.886 -44.455 1.00 72.29 O
ATOM 27 OP2 U A2220 123.176 -37.129 -44.695 1.00 51.62 O
ATOM 28 O5' U A2220 122.610 -39.585 -44.724 1.00 37.76 O
TER
ATOM 1 O3' G B2110 127.137 -35.796 -30.001 1.00 42.96 O
ATOM 2 P C B2111 126.020 -34.906 -30.707 1.00 42.00 P
ATOM 3 OP1 C B2111 126.665 -33.639 -31.150 1.00 48.09 O
ATOM 4 OP2 C B2111 124.879 -34.834 -29.771 1.00 37.67 O
ATOM 5 O5' C B2111 125.639 -35.801 -31.971 1.00 36.29 O
ATOM 6 C5' C B2111 126.639 -36.498 -32.694 1.00 31.78 C
ATOM 7 C4' C B2111 126.111 -37.036 -34.002 1.00 37.71 C
ATOM 8 O4' C B2111 125.533 -38.349 -33.796 1.00 39.99 O
ATOM 9 C3' C B2111 125.000 -36.235 -34.666 1.00 36.87 C
ATOM 10 O3' C B2111 125.478 -35.156 -35.438 1.00 32.03 O
ATOM 11 C2' C B2111 124.292 -37.288 -35.497 1.00 49.38 C
ATOM 12 O2' C B2111 125.028 -37.566 -36.676 1.00 47.49 O
ATOM 13 C1' C B2111 124.380 -38.501 -34.586 1.00 46.66 C
ATOM 14 N1 C B2111 123.218 -38.598 -33.685 1.00 46.17 N
ATOM 15 C2 C B2111 122.083 -39.274 -34.125 1.00 43.05 C
ATOM 16 O2 C B2111 122.090 -39.756 -35.277 1.00 43.79 O
ATOM 17 N3 C B2111 121.034 -39.377 -33.277 1.00 39.00 N
ATOM 18 C4 C B2111 121.097 -38.838 -32.063 1.00 39.17 C
ATOM 19 N4 C B2111 120.049 -38.955 -31.263 1.00 38.98 N
ATOM 20 C5 C B2111 122.241 -38.148 -31.596 1.00 46.05 C
ATOM 21 C6 C B2111 123.272 -38.053 -32.434 1.00 42.09 C
ATOM 22 P G B2112 124.499 -33.953 -35.812 1.00 52.32 P
ATOM 23 OP1 G B2112 125.273 -33.020 -36.663 1.00 53.67 O
ATOM 24 OP2 G B2112 123.913 -33.448 -34.537 1.00 52.20 O
ATOM 25 O5' G B2112 123.364 -34.664 -36.674 1.00 48.14 O
TER
Atoms:
OP1: (123.612,-43.254,-41.637)
OP2: (126.140,-43.170,-41.953)
C3': (124.436,-38.605,-41.740)
C1': (125.679,-37.525,-40.034)
C5': (123.930,-40.574,-40.221)
O6: (131.533,-38.160,-38.846)
O4': (124.934,-38.562,-39.442)
C8: (127.793,-38.812,-40.824)
C2: (128.842,-36.260,-37.477)
C6: (130.384,-37.726,-38.702)
C5: (129.227,-38.058,-39.452)
C4: (128.031,-37.441,-39.134)
P: (124.938,-42.757,-41.197)
C4': (123.980,-39.095,-40.373)
C2': (125.135,-37.286,-41.444)
O2': (124.196,-36.219,-41.401)
N1: (130.087,-36.798,-37.703)
N2: (128.734,-35.378,-36.486)
N3: (127.765,-36.538,-38.170)
N7: (129.068,-38.926,-40.522)
N9: (127.106,-37.918,-40.031)
O5': (124.893,-41.185,-41.047)
O3': (123.357,-38.477,-42.639)
OP2: (126.140,-43.170,-41.953)
C3': (124.436,-38.605,-41.740)
C1': (125.679,-37.525,-40.034)
C5': (123.930,-40.574,-40.221)
O6: (131.533,-38.160,-38.846)
O4': (124.934,-38.562,-39.442)
C8: (127.793,-38.812,-40.824)
C2: (128.842,-36.260,-37.477)
C6: (130.384,-37.726,-38.702)
C5: (129.227,-38.058,-39.452)
C4: (128.031,-37.441,-39.134)
P: (124.938,-42.757,-41.197)
C4': (123.980,-39.095,-40.373)
C2': (125.135,-37.286,-41.444)
O2': (124.196,-36.219,-41.401)
N1: (130.087,-36.798,-37.703)
N2: (128.734,-35.378,-36.486)
N3: (127.765,-36.538,-38.170)
N7: (129.068,-38.926,-40.522)
N9: (127.106,-37.918,-40.031)
O5': (124.893,-41.185,-41.047)
O3': (123.357,-38.477,-42.639)
C2: (122.083,-39.274,-34.125)
OP1: (126.665,-33.639,-31.150)
OP2: (124.879,-34.834,-29.771)
C4: (121.097,-38.838,-32.063)
O5': (125.639,-35.801,-31.971)
C3': (125.000,-36.235,-34.666)
C1': (124.380,-38.501,-34.586)
O4': (125.533,-38.349,-33.796)
C5': (126.639,-36.498,-32.694)
P: (126.020,-34.906,-30.707)
O2: (122.090,-39.756,-35.277)
C4': (126.111,-37.036,-34.002)
C2': (124.292,-37.288,-35.497)
O2': (125.028,-37.566,-36.676)
N1: (123.218,-38.598,-33.685)
N3: (121.034,-39.377,-33.277)
N4: (120.049,-38.955,-31.263)
C6: (123.272,-38.053,-32.434)
C5: (122.241,-38.148,-31.596)
O3': (125.478,-35.156,-35.438)
OP1: (126.665,-33.639,-31.150)
OP2: (124.879,-34.834,-29.771)
C4: (121.097,-38.838,-32.063)
O5': (125.639,-35.801,-31.971)
C3': (125.000,-36.235,-34.666)
C1': (124.380,-38.501,-34.586)
O4': (125.533,-38.349,-33.796)
C5': (126.639,-36.498,-32.694)
P: (126.020,-34.906,-30.707)
O2: (122.090,-39.756,-35.277)
C4': (126.111,-37.036,-34.002)
C2': (124.292,-37.288,-35.497)
O2': (125.028,-37.566,-36.676)
N1: (123.218,-38.598,-33.685)
N3: (121.034,-39.377,-33.277)
N4: (120.049,-38.955,-31.263)
C6: (123.272,-38.053,-32.434)
C5: (122.241,-38.148,-31.596)
O3': (125.478,-35.156,-35.438)
Image (generated by PyMOL):