Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A497:A507
Extra
PDB:
ATOM 1 O3' C A 496 -59.753 79.649 96.690 1.00 20.46 O
ATOM 2 P C A 497 -60.386 79.733 98.175 1.00 34.94 P
ATOM 3 OP1 C A 497 -61.502 80.713 98.177 1.00 49.31 O
ATOM 4 OP2 C A 497 -59.270 79.891 99.145 1.00 45.46 O
ATOM 5 O5' C A 497 -61.014 78.294 98.417 1.00 49.53 O
ATOM 6 C5' C A 497 -60.197 77.202 98.861 1.00 48.34 C
ATOM 7 C4' C A 497 -61.069 76.089 99.377 1.00 47.87 C
ATOM 8 O4' C A 497 -61.991 75.670 98.336 1.00 47.14 O
ATOM 9 C3' C A 497 -60.342 74.823 99.795 1.00 48.44 C
ATOM 10 O3' C A 497 -59.885 74.949 101.143 1.00 49.72 O
ATOM 11 C2' C A 497 -61.414 73.742 99.627 1.00 47.59 C
ATOM 12 O2' C A 497 -62.261 73.590 100.750 1.00 47.89 O
ATOM 13 C1' C A 497 -62.237 74.281 98.450 1.00 47.15 C
ATOM 14 N1 C A 497 -61.959 73.640 97.150 1.00 44.23 N
ATOM 15 C2 C A 497 -62.657 72.477 96.810 1.00 45.19 C
ATOM 16 O2 C A 497 -63.480 72.010 97.613 1.00 45.33 O
ATOM 17 N3 C A 497 -62.416 71.891 95.621 1.00 44.81 N
ATOM 18 C4 C A 497 -61.519 72.415 94.788 1.00 44.00 C
ATOM 19 N4 C A 497 -61.310 71.800 93.631 1.00 44.59 N
ATOM 20 C5 C A 497 -60.793 73.592 95.106 1.00 43.79 C
ATOM 21 C6 C A 497 -61.041 74.169 96.284 1.00 44.63 C
ATOM 22 P A A 498 -58.569 74.158 101.628 1.00 41.25 P
ATOM 23 OP1 A A 498 -58.620 74.197 103.114 1.00 36.32 O
ATOM 24 OP2 A A 498 -57.361 74.659 100.922 1.00 38.52 O
ATOM 25 O5' A A 498 -58.835 72.657 101.161 1.00 43.31 O
TER
ATOM 1 O3' C B 506 -56.355 74.687 84.923 1.00 21.26 O
ATOM 2 P G B 507 -57.674 75.533 85.332 1.00 17.68 P
ATOM 3 OP1 G B 507 -58.763 75.109 84.396 1.00 44.10 O
ATOM 4 OP2 G B 507 -57.278 76.949 85.378 1.00 42.46 O
ATOM 5 O5' G B 507 -58.079 75.033 86.800 1.00 1.64 O
ATOM 6 C5' G B 507 -58.852 73.821 86.965 1.00 1.64 C
ATOM 7 C4' G B 507 -59.348 73.653 88.389 1.00 3.51 C
ATOM 8 O4' G B 507 -58.254 73.354 89.291 1.00 2.72 O
ATOM 9 C3' G B 507 -60.081 74.814 89.039 1.00 5.21 C
ATOM 10 O3' G B 507 -61.458 74.847 88.702 1.00 8.41 O
ATOM 11 C2' G B 507 -59.953 74.482 90.514 1.00 4.54 C
ATOM 12 O2' G B 507 -60.967 73.566 90.884 1.00 5.16 O
ATOM 13 C1' G B 507 -58.549 73.865 90.583 1.00 2.77 C
ATOM 14 N9 G B 507 -57.552 74.884 90.904 1.00 29.80 N
ATOM 15 C8 G B 507 -56.728 75.526 90.013 1.00 30.43 C
ATOM 16 N7 G B 507 -55.998 76.458 90.567 1.00 30.32 N
ATOM 17 C5 G B 507 -56.346 76.418 91.907 1.00 28.67 C
ATOM 18 C6 G B 507 -55.898 77.203 92.972 1.00 27.66 C
ATOM 19 O6 G B 507 -55.095 78.134 92.946 1.00 27.54 O
ATOM 20 N1 G B 507 -56.488 76.826 94.167 1.00 25.79 N
ATOM 21 C2 G B 507 -57.401 75.817 94.311 1.00 25.62 C
ATOM 22 N2 G B 507 -57.832 75.583 95.558 1.00 25.21 N
ATOM 23 N3 G B 507 -57.852 75.084 93.310 1.00 25.60 N
ATOM 24 C4 G B 507 -57.284 75.435 92.141 1.00 28.23 C
ATOM 25 P G B 508 -62.082 76.178 88.069 1.00 40.28 P
ATOM 26 OP1 G B 508 -63.438 75.837 87.586 1.00 16.80 O
ATOM 27 OP2 G B 508 -61.066 76.699 87.114 1.00 16.11 O
ATOM 28 O5' G B 508 -62.233 77.180 89.301 1.00 40.00 O
TER
ATOM 2 P C A 497 -60.386 79.733 98.175 1.00 34.94 P
ATOM 3 OP1 C A 497 -61.502 80.713 98.177 1.00 49.31 O
ATOM 4 OP2 C A 497 -59.270 79.891 99.145 1.00 45.46 O
ATOM 5 O5' C A 497 -61.014 78.294 98.417 1.00 49.53 O
ATOM 6 C5' C A 497 -60.197 77.202 98.861 1.00 48.34 C
ATOM 7 C4' C A 497 -61.069 76.089 99.377 1.00 47.87 C
ATOM 8 O4' C A 497 -61.991 75.670 98.336 1.00 47.14 O
ATOM 9 C3' C A 497 -60.342 74.823 99.795 1.00 48.44 C
ATOM 10 O3' C A 497 -59.885 74.949 101.143 1.00 49.72 O
ATOM 11 C2' C A 497 -61.414 73.742 99.627 1.00 47.59 C
ATOM 12 O2' C A 497 -62.261 73.590 100.750 1.00 47.89 O
ATOM 13 C1' C A 497 -62.237 74.281 98.450 1.00 47.15 C
ATOM 14 N1 C A 497 -61.959 73.640 97.150 1.00 44.23 N
ATOM 15 C2 C A 497 -62.657 72.477 96.810 1.00 45.19 C
ATOM 16 O2 C A 497 -63.480 72.010 97.613 1.00 45.33 O
ATOM 17 N3 C A 497 -62.416 71.891 95.621 1.00 44.81 N
ATOM 18 C4 C A 497 -61.519 72.415 94.788 1.00 44.00 C
ATOM 19 N4 C A 497 -61.310 71.800 93.631 1.00 44.59 N
ATOM 20 C5 C A 497 -60.793 73.592 95.106 1.00 43.79 C
ATOM 21 C6 C A 497 -61.041 74.169 96.284 1.00 44.63 C
ATOM 22 P A A 498 -58.569 74.158 101.628 1.00 41.25 P
ATOM 23 OP1 A A 498 -58.620 74.197 103.114 1.00 36.32 O
ATOM 24 OP2 A A 498 -57.361 74.659 100.922 1.00 38.52 O
ATOM 25 O5' A A 498 -58.835 72.657 101.161 1.00 43.31 O
TER
ATOM 1 O3' C B 506 -56.355 74.687 84.923 1.00 21.26 O
ATOM 2 P G B 507 -57.674 75.533 85.332 1.00 17.68 P
ATOM 3 OP1 G B 507 -58.763 75.109 84.396 1.00 44.10 O
ATOM 4 OP2 G B 507 -57.278 76.949 85.378 1.00 42.46 O
ATOM 5 O5' G B 507 -58.079 75.033 86.800 1.00 1.64 O
ATOM 6 C5' G B 507 -58.852 73.821 86.965 1.00 1.64 C
ATOM 7 C4' G B 507 -59.348 73.653 88.389 1.00 3.51 C
ATOM 8 O4' G B 507 -58.254 73.354 89.291 1.00 2.72 O
ATOM 9 C3' G B 507 -60.081 74.814 89.039 1.00 5.21 C
ATOM 10 O3' G B 507 -61.458 74.847 88.702 1.00 8.41 O
ATOM 11 C2' G B 507 -59.953 74.482 90.514 1.00 4.54 C
ATOM 12 O2' G B 507 -60.967 73.566 90.884 1.00 5.16 O
ATOM 13 C1' G B 507 -58.549 73.865 90.583 1.00 2.77 C
ATOM 14 N9 G B 507 -57.552 74.884 90.904 1.00 29.80 N
ATOM 15 C8 G B 507 -56.728 75.526 90.013 1.00 30.43 C
ATOM 16 N7 G B 507 -55.998 76.458 90.567 1.00 30.32 N
ATOM 17 C5 G B 507 -56.346 76.418 91.907 1.00 28.67 C
ATOM 18 C6 G B 507 -55.898 77.203 92.972 1.00 27.66 C
ATOM 19 O6 G B 507 -55.095 78.134 92.946 1.00 27.54 O
ATOM 20 N1 G B 507 -56.488 76.826 94.167 1.00 25.79 N
ATOM 21 C2 G B 507 -57.401 75.817 94.311 1.00 25.62 C
ATOM 22 N2 G B 507 -57.832 75.583 95.558 1.00 25.21 N
ATOM 23 N3 G B 507 -57.852 75.084 93.310 1.00 25.60 N
ATOM 24 C4 G B 507 -57.284 75.435 92.141 1.00 28.23 C
ATOM 25 P G B 508 -62.082 76.178 88.069 1.00 40.28 P
ATOM 26 OP1 G B 508 -63.438 75.837 87.586 1.00 16.80 O
ATOM 27 OP2 G B 508 -61.066 76.699 87.114 1.00 16.11 O
ATOM 28 O5' G B 508 -62.233 77.180 89.301 1.00 40.00 O
TER
Atoms:
C2: (-62.657,72.477,96.810)
OP1: (-61.502,80.713,98.177)
OP2: (-59.270,79.891,99.145)
C4: (-61.519,72.415,94.788)
O5': (-61.014,78.294,98.417)
C3': (-60.342,74.823,99.795)
C1': (-62.237,74.281,98.450)
O4': (-61.991,75.670,98.336)
C5': (-60.197,77.202,98.861)
P: (-60.386,79.733,98.175)
O2: (-63.480,72.010,97.613)
C4': (-61.069,76.089,99.377)
C2': (-61.414,73.742,99.627)
O2': (-62.261,73.590,100.750)
N1: (-61.959,73.640,97.150)
N3: (-62.416,71.891,95.621)
N4: (-61.310,71.800,93.631)
C6: (-61.041,74.169,96.284)
C5: (-60.793,73.592,95.106)
O3': (-59.885,74.949,101.143)
OP1: (-61.502,80.713,98.177)
OP2: (-59.270,79.891,99.145)
C4: (-61.519,72.415,94.788)
O5': (-61.014,78.294,98.417)
C3': (-60.342,74.823,99.795)
C1': (-62.237,74.281,98.450)
O4': (-61.991,75.670,98.336)
C5': (-60.197,77.202,98.861)
P: (-60.386,79.733,98.175)
O2: (-63.480,72.010,97.613)
C4': (-61.069,76.089,99.377)
C2': (-61.414,73.742,99.627)
O2': (-62.261,73.590,100.750)
N1: (-61.959,73.640,97.150)
N3: (-62.416,71.891,95.621)
N4: (-61.310,71.800,93.631)
C6: (-61.041,74.169,96.284)
C5: (-60.793,73.592,95.106)
O3': (-59.885,74.949,101.143)
OP1: (-58.763,75.109,84.396)
OP2: (-57.278,76.949,85.378)
C3': (-60.081,74.814,89.039)
C1': (-58.549,73.865,90.583)
C5': (-58.852,73.821,86.965)
O6: (-55.095,78.134,92.946)
O4': (-58.254,73.354,89.291)
C8: (-56.728,75.526,90.013)
C2: (-57.401,75.817,94.311)
C6: (-55.898,77.203,92.972)
C5: (-56.346,76.418,91.907)
C4: (-57.284,75.435,92.141)
P: (-57.674,75.533,85.332)
C4': (-59.348,73.653,88.389)
C2': (-59.953,74.482,90.514)
O2': (-60.967,73.566,90.884)
N1: (-56.488,76.826,94.167)
N2: (-57.832,75.583,95.558)
N3: (-57.852,75.084,93.310)
N7: (-55.998,76.458,90.567)
N9: (-57.552,74.884,90.904)
O5': (-58.079,75.033,86.800)
O3': (-61.458,74.847,88.702)
OP2: (-57.278,76.949,85.378)
C3': (-60.081,74.814,89.039)
C1': (-58.549,73.865,90.583)
C5': (-58.852,73.821,86.965)
O6: (-55.095,78.134,92.946)
O4': (-58.254,73.354,89.291)
C8: (-56.728,75.526,90.013)
C2: (-57.401,75.817,94.311)
C6: (-55.898,77.203,92.972)
C5: (-56.346,76.418,91.907)
C4: (-57.284,75.435,92.141)
P: (-57.674,75.533,85.332)
C4': (-59.348,73.653,88.389)
C2': (-59.953,74.482,90.514)
O2': (-60.967,73.566,90.884)
N1: (-56.488,76.826,94.167)
N2: (-57.832,75.583,95.558)
N3: (-57.852,75.084,93.310)
N7: (-55.998,76.458,90.567)
N9: (-57.552,74.884,90.904)
O5': (-58.079,75.033,86.800)
O3': (-61.458,74.847,88.702)
Image (generated by PyMOL):