Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1910:A1908
Extra
PDB:
ATOM 1 O3' U A1909 -9.991 94.717 162.426 1.00 4.63 O
ATOM 2 P C A1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 3 OP1 C A1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 4 OP2 C A1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 5 O5' C A1910 -11.511 92.737 162.481 1.00 3.90 O
ATOM 6 C5' C A1910 -12.861 93.070 162.174 1.00 3.90 C
ATOM 7 C4' C A1910 -13.555 91.859 161.619 1.00 3.90 C
ATOM 8 O4' C A1910 -12.805 91.415 160.466 1.00 3.90 O
ATOM 9 C3' C A1910 -13.566 90.651 162.540 1.00 3.90 C
ATOM 10 O3' C A1910 -14.677 90.669 163.424 1.00 3.90 O
ATOM 11 C2' C A1910 -13.637 89.487 161.570 1.00 3.90 C
ATOM 12 O2' C A1910 -14.944 89.292 161.085 1.00 3.90 O
ATOM 13 C1' C A1910 -12.793 90.008 160.420 1.00 3.90 C
ATOM 14 N1 C A1910 -11.409 89.543 160.463 1.00 0.79 N
ATOM 15 C2 C A1910 -11.132 88.299 159.941 1.00 0.79 C
ATOM 16 O2 C A1910 -12.067 87.629 159.486 1.00 0.79 O
ATOM 17 N3 C A1910 -9.863 87.845 159.938 1.00 0.79 N
ATOM 18 C4 C A1910 -8.885 88.605 160.438 1.00 0.79 C
ATOM 19 N4 C A1910 -7.635 88.135 160.397 1.00 0.79 N
ATOM 20 C5 C A1910 -9.145 89.883 160.994 1.00 0.79 C
ATOM 21 C6 C A1910 -10.412 90.308 160.989 1.00 0.79 C
ATOM 22 P U A1911 -14.660 89.714 164.716 1.00 0.79 P
ATOM 23 OP1 U A1911 -15.859 90.068 165.541 1.00 0.79 O
ATOM 24 OP2 U A1911 -13.297 89.767 165.306 1.00 0.79 O
ATOM 25 O5' U A1911 -14.884 88.254 164.112 1.00 27.44 O
TER
ATOM 1 O3' U B1907 -1.806 88.642 158.091 1.00 11.86 O
ATOM 2 P G B1908 -2.673 88.257 159.390 1.00 20.09 P
ATOM 3 OP1 G B1908 -1.745 87.708 160.379 1.00 3.67 O
ATOM 4 OP2 G B1908 -3.869 87.484 158.992 1.00 3.67 O
ATOM 5 O5' G B1908 -3.183 89.637 159.966 1.00 26.59 O
ATOM 6 C5' G B1908 -4.206 90.358 159.282 1.00 26.59 C
ATOM 7 C4' G B1908 -5.101 91.016 160.275 1.00 26.59 C
ATOM 8 O4' G B1908 -5.788 90.000 161.018 1.00 26.59 O
ATOM 9 C3' G B1908 -4.325 91.851 161.267 1.00 26.59 C
ATOM 10 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 11 C2' G B1908 -5.109 91.694 162.574 1.00 26.59 C
ATOM 12 O2' G B1908 -6.144 92.648 162.756 1.00 26.59 O
ATOM 13 C1' G B1908 -5.766 90.314 162.381 1.00 26.59 C
ATOM 14 N9 G B1908 -5.280 89.116 163.050 1.00 7.67 N
ATOM 15 C8 G B1908 -4.042 88.527 162.953 1.00 7.67 C
ATOM 16 N7 G B1908 -3.981 87.366 163.553 1.00 7.67 N
ATOM 17 C5 G B1908 -5.246 87.196 164.105 1.00 7.67 C
ATOM 18 C6 G B1908 -5.802 86.109 164.850 1.00 7.67 C
ATOM 19 O6 G B1908 -5.282 85.043 165.148 1.00 7.67 O
ATOM 20 N1 G B1908 -7.115 86.358 165.233 1.00 7.67 N
ATOM 21 C2 G B1908 -7.820 87.494 164.921 1.00 7.67 C
ATOM 22 N2 G B1908 -9.066 87.560 165.388 1.00 7.67 N
ATOM 23 N3 G B1908 -7.334 88.497 164.205 1.00 7.67 N
ATOM 24 C4 G B1908 -6.046 88.283 163.836 1.00 7.67 C
ATOM 25 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 26 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 27 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 28 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
TER
ATOM 2 P C A1910 -10.646 93.661 163.434 1.00 3.18 P
ATOM 3 OP1 C A1910 -11.598 94.350 164.366 1.00 3.76 O
ATOM 4 OP2 C A1910 -9.490 92.890 163.985 1.00 3.76 O
ATOM 5 O5' C A1910 -11.511 92.737 162.481 1.00 3.90 O
ATOM 6 C5' C A1910 -12.861 93.070 162.174 1.00 3.90 C
ATOM 7 C4' C A1910 -13.555 91.859 161.619 1.00 3.90 C
ATOM 8 O4' C A1910 -12.805 91.415 160.466 1.00 3.90 O
ATOM 9 C3' C A1910 -13.566 90.651 162.540 1.00 3.90 C
ATOM 10 O3' C A1910 -14.677 90.669 163.424 1.00 3.90 O
ATOM 11 C2' C A1910 -13.637 89.487 161.570 1.00 3.90 C
ATOM 12 O2' C A1910 -14.944 89.292 161.085 1.00 3.90 O
ATOM 13 C1' C A1910 -12.793 90.008 160.420 1.00 3.90 C
ATOM 14 N1 C A1910 -11.409 89.543 160.463 1.00 0.79 N
ATOM 15 C2 C A1910 -11.132 88.299 159.941 1.00 0.79 C
ATOM 16 O2 C A1910 -12.067 87.629 159.486 1.00 0.79 O
ATOM 17 N3 C A1910 -9.863 87.845 159.938 1.00 0.79 N
ATOM 18 C4 C A1910 -8.885 88.605 160.438 1.00 0.79 C
ATOM 19 N4 C A1910 -7.635 88.135 160.397 1.00 0.79 N
ATOM 20 C5 C A1910 -9.145 89.883 160.994 1.00 0.79 C
ATOM 21 C6 C A1910 -10.412 90.308 160.989 1.00 0.79 C
ATOM 22 P U A1911 -14.660 89.714 164.716 1.00 0.79 P
ATOM 23 OP1 U A1911 -15.859 90.068 165.541 1.00 0.79 O
ATOM 24 OP2 U A1911 -13.297 89.767 165.306 1.00 0.79 O
ATOM 25 O5' U A1911 -14.884 88.254 164.112 1.00 27.44 O
TER
ATOM 1 O3' U B1907 -1.806 88.642 158.091 1.00 11.86 O
ATOM 2 P G B1908 -2.673 88.257 159.390 1.00 20.09 P
ATOM 3 OP1 G B1908 -1.745 87.708 160.379 1.00 3.67 O
ATOM 4 OP2 G B1908 -3.869 87.484 158.992 1.00 3.67 O
ATOM 5 O5' G B1908 -3.183 89.637 159.966 1.00 26.59 O
ATOM 6 C5' G B1908 -4.206 90.358 159.282 1.00 26.59 C
ATOM 7 C4' G B1908 -5.101 91.016 160.275 1.00 26.59 C
ATOM 8 O4' G B1908 -5.788 90.000 161.018 1.00 26.59 O
ATOM 9 C3' G B1908 -4.325 91.851 161.267 1.00 26.59 C
ATOM 10 O3' G B1908 -4.181 93.126 160.599 1.00 26.59 O
ATOM 11 C2' G B1908 -5.109 91.694 162.574 1.00 26.59 C
ATOM 12 O2' G B1908 -6.144 92.648 162.756 1.00 26.59 O
ATOM 13 C1' G B1908 -5.766 90.314 162.381 1.00 26.59 C
ATOM 14 N9 G B1908 -5.280 89.116 163.050 1.00 7.67 N
ATOM 15 C8 G B1908 -4.042 88.527 162.953 1.00 7.67 C
ATOM 16 N7 G B1908 -3.981 87.366 163.553 1.00 7.67 N
ATOM 17 C5 G B1908 -5.246 87.196 164.105 1.00 7.67 C
ATOM 18 C6 G B1908 -5.802 86.109 164.850 1.00 7.67 C
ATOM 19 O6 G B1908 -5.282 85.043 165.148 1.00 7.67 O
ATOM 20 N1 G B1908 -7.115 86.358 165.233 1.00 7.67 N
ATOM 21 C2 G B1908 -7.820 87.494 164.921 1.00 7.67 C
ATOM 22 N2 G B1908 -9.066 87.560 165.388 1.00 7.67 N
ATOM 23 N3 G B1908 -7.334 88.497 164.205 1.00 7.67 N
ATOM 24 C4 G B1908 -6.046 88.283 163.836 1.00 7.67 C
ATOM 25 P U B1909 -4.896 94.463 161.150 1.00 20.14 P
ATOM 26 OP1 U B1909 -4.335 95.567 160.334 1.00 20.14 O
ATOM 27 OP2 U B1909 -4.816 94.544 162.627 1.00 20.14 O
ATOM 28 O5' U B1909 -6.427 94.381 160.764 1.00 4.63 O
TER
Atoms:
C2: (-11.132,88.299,159.941)
OP1: (-11.598,94.350,164.366)
OP2: (-9.490,92.890,163.985)
C4: (-8.885,88.605,160.438)
O5': (-11.511,92.737,162.481)
C3': (-13.566,90.651,162.540)
C1': (-12.793,90.008,160.420)
O4': (-12.805,91.415,160.466)
C5': (-12.861,93.070,162.174)
P: (-10.646,93.661,163.434)
O2: (-12.067,87.629,159.486)
C4': (-13.555,91.859,161.619)
C2': (-13.637,89.487,161.570)
O2': (-14.944,89.292,161.085)
N1: (-11.409,89.543,160.463)
N3: (-9.863,87.845,159.938)
N4: (-7.635,88.135,160.397)
C6: (-10.412,90.308,160.989)
C5: (-9.145,89.883,160.994)
O3': (-14.677,90.669,163.424)
OP1: (-11.598,94.350,164.366)
OP2: (-9.490,92.890,163.985)
C4: (-8.885,88.605,160.438)
O5': (-11.511,92.737,162.481)
C3': (-13.566,90.651,162.540)
C1': (-12.793,90.008,160.420)
O4': (-12.805,91.415,160.466)
C5': (-12.861,93.070,162.174)
P: (-10.646,93.661,163.434)
O2: (-12.067,87.629,159.486)
C4': (-13.555,91.859,161.619)
C2': (-13.637,89.487,161.570)
O2': (-14.944,89.292,161.085)
N1: (-11.409,89.543,160.463)
N3: (-9.863,87.845,159.938)
N4: (-7.635,88.135,160.397)
C6: (-10.412,90.308,160.989)
C5: (-9.145,89.883,160.994)
O3': (-14.677,90.669,163.424)
OP1: (-1.745,87.708,160.379)
OP2: (-3.869,87.484,158.992)
C3': (-4.325,91.851,161.267)
C1': (-5.766,90.314,162.381)
C5': (-4.206,90.358,159.282)
O6: (-5.282,85.043,165.148)
O4': (-5.788,90.000,161.018)
C8: (-4.042,88.527,162.953)
C2: (-7.820,87.494,164.921)
C6: (-5.802,86.109,164.850)
C5: (-5.246,87.196,164.105)
C4: (-6.046,88.283,163.836)
P: (-2.673,88.257,159.390)
C4': (-5.101,91.016,160.275)
C2': (-5.109,91.694,162.574)
O2': (-6.144,92.648,162.756)
N1: (-7.115,86.358,165.233)
N2: (-9.066,87.560,165.388)
N3: (-7.334,88.497,164.205)
N7: (-3.981,87.366,163.553)
N9: (-5.280,89.116,163.050)
O5': (-3.183,89.637,159.966)
O3': (-4.181,93.126,160.599)
OP2: (-3.869,87.484,158.992)
C3': (-4.325,91.851,161.267)
C1': (-5.766,90.314,162.381)
C5': (-4.206,90.358,159.282)
O6: (-5.282,85.043,165.148)
O4': (-5.788,90.000,161.018)
C8: (-4.042,88.527,162.953)
C2: (-7.820,87.494,164.921)
C6: (-5.802,86.109,164.850)
C5: (-5.246,87.196,164.105)
C4: (-6.046,88.283,163.836)
P: (-2.673,88.257,159.390)
C4': (-5.101,91.016,160.275)
C2': (-5.109,91.694,162.574)
O2': (-6.144,92.648,162.756)
N1: (-7.115,86.358,165.233)
N2: (-9.066,87.560,165.388)
N3: (-7.334,88.497,164.205)
N7: (-3.981,87.366,163.553)
N9: (-5.280,89.116,163.050)
O5': (-3.183,89.637,159.966)
O3': (-4.181,93.126,160.599)
Image (generated by PyMOL):