Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OI1:A562:A536
Extra
PDB:
ATOM 1 O3' G A 561 185.958 -93.945 -88.017 1.00 59.45 O
ATOM 2 P G A 562 185.515 -95.011 -89.158 1.00 75.83 P
ATOM 3 OP1 G A 562 185.720 -94.342 -90.490 1.00 50.89 O
ATOM 4 OP2 G A 562 184.151 -95.510 -88.795 1.00 58.86 O
ATOM 5 O5' G A 562 186.576 -96.171 -88.982 1.00 53.05 O
ATOM 6 C5' G A 562 187.956 -95.884 -89.109 1.00 56.14 C
ATOM 7 C4' G A 562 188.774 -97.141 -89.190 1.00 55.97 C
ATOM 8 O4' G A 562 189.006 -97.671 -87.853 1.00 57.07 O
ATOM 9 C3' G A 562 188.140 -98.301 -89.943 1.00 48.99 C
ATOM 10 O3' G A 562 188.273 -98.176 -91.352 1.00 51.92 O
ATOM 11 C2' G A 562 188.877 -99.501 -89.353 1.00 55.90 C
ATOM 12 O2' G A 562 190.199 -99.590 -89.870 1.00 65.59 O
ATOM 13 C1' G A 562 188.982 -99.085 -87.890 1.00 52.59 C
ATOM 14 N9 G A 562 187.827 -99.555 -87.099 1.00 61.71 N
ATOM 15 C8 G A 562 186.679 -98.839 -86.802 1.00 58.07 C
ATOM 16 N7 G A 562 185.838 -99.522 -86.083 1.00 56.01 N
ATOM 17 C5 G A 562 186.455-100.760 -85.877 1.00 61.66 C
ATOM 18 C6 G A 562 186.014-101.927 -85.160 1.00 67.25 C
ATOM 19 O6 G A 562 184.944-102.118 -84.528 1.00 68.22 O
ATOM 20 N1 G A 562 186.964-102.946 -85.227 1.00 60.45 N
ATOM 21 C2 G A 562 188.162-102.869 -85.897 1.00 60.47 C
ATOM 22 N2 G A 562 188.939-103.969 -85.846 1.00 60.66 N
ATOM 23 N3 G A 562 188.572-101.796 -86.562 1.00 57.00 N
ATOM 24 C4 G A 562 187.684-100.790 -86.507 1.00 55.37 C
ATOM 25 P U A 563 187.337 -99.032 -92.350 1.00 57.50 P
ATOM 26 OP1 U A 563 187.871 -98.829 -93.730 1.00 44.60 O
ATOM 27 OP2 U A 563 185.937 -98.660 -92.062 1.00 68.02 O
ATOM 28 O5' U A 563 187.595-100.529 -91.896 1.00 48.67 O
TER
ATOM 1 O3' G B 535 195.010-106.260 -84.661 1.00 64.44 O
ATOM 2 P C B 536 194.494-107.736 -85.058 1.00 70.46 P
ATOM 3 OP1 C B 536 194.036-108.386 -83.807 1.00 74.44 O
ATOM 4 OP2 C B 536 195.576-108.381 -85.850 1.00 61.63 O
ATOM 5 O5' C B 536 193.238-107.441 -85.990 1.00 64.08 O
ATOM 6 C5' C B 536 192.021-107.001 -85.431 1.00 53.69 C
ATOM 7 C4' C B 536 191.008-106.690 -86.495 1.00 63.44 C
ATOM 8 O4' C B 536 191.534-105.680 -87.398 1.00 61.24 O
ATOM 9 C3' C B 536 190.628-107.838 -87.420 1.00 60.99 C
ATOM 10 O3' C B 536 189.699-108.738 -86.852 1.00 56.15 O
ATOM 11 C2' C B 536 190.098-107.106 -88.651 1.00 63.22 C
ATOM 12 O2' C B 536 188.787-106.586 -88.424 1.00 54.29 O
ATOM 13 C1' C B 536 191.083-105.944 -88.722 1.00 62.41 C
ATOM 14 N1 C B 536 192.246-106.302 -89.537 1.00 67.82 N
ATOM 15 C2 C B 536 192.109-106.153 -90.908 1.00 65.73 C
ATOM 16 O2 C B 536 191.012-105.707 -91.304 1.00 61.31 O
ATOM 17 N3 C B 536 193.162-106.476 -91.704 1.00 58.04 N
ATOM 18 C4 C B 536 194.282-106.938 -91.140 1.00 51.30 C
ATOM 19 N4 C B 536 195.305-107.265 -91.917 1.00 63.05 N
ATOM 20 C5 C B 536 194.432-107.105 -89.744 1.00 55.83 C
ATOM 21 C6 C B 536 193.390-106.784 -88.976 1.00 64.27 C
ATOM 22 P U B 537 189.789-110.299 -87.229 1.00 76.95 P
ATOM 23 OP1 U B 537 188.591-110.976 -86.598 1.00 51.49 O
ATOM 24 OP2 U B 537 191.155-110.746 -86.860 1.00 61.02 O
ATOM 25 O5' U B 537 189.644-110.299 -88.826 1.00 64.93 O
TER
ATOM 2 P G A 562 185.515 -95.011 -89.158 1.00 75.83 P
ATOM 3 OP1 G A 562 185.720 -94.342 -90.490 1.00 50.89 O
ATOM 4 OP2 G A 562 184.151 -95.510 -88.795 1.00 58.86 O
ATOM 5 O5' G A 562 186.576 -96.171 -88.982 1.00 53.05 O
ATOM 6 C5' G A 562 187.956 -95.884 -89.109 1.00 56.14 C
ATOM 7 C4' G A 562 188.774 -97.141 -89.190 1.00 55.97 C
ATOM 8 O4' G A 562 189.006 -97.671 -87.853 1.00 57.07 O
ATOM 9 C3' G A 562 188.140 -98.301 -89.943 1.00 48.99 C
ATOM 10 O3' G A 562 188.273 -98.176 -91.352 1.00 51.92 O
ATOM 11 C2' G A 562 188.877 -99.501 -89.353 1.00 55.90 C
ATOM 12 O2' G A 562 190.199 -99.590 -89.870 1.00 65.59 O
ATOM 13 C1' G A 562 188.982 -99.085 -87.890 1.00 52.59 C
ATOM 14 N9 G A 562 187.827 -99.555 -87.099 1.00 61.71 N
ATOM 15 C8 G A 562 186.679 -98.839 -86.802 1.00 58.07 C
ATOM 16 N7 G A 562 185.838 -99.522 -86.083 1.00 56.01 N
ATOM 17 C5 G A 562 186.455-100.760 -85.877 1.00 61.66 C
ATOM 18 C6 G A 562 186.014-101.927 -85.160 1.00 67.25 C
ATOM 19 O6 G A 562 184.944-102.118 -84.528 1.00 68.22 O
ATOM 20 N1 G A 562 186.964-102.946 -85.227 1.00 60.45 N
ATOM 21 C2 G A 562 188.162-102.869 -85.897 1.00 60.47 C
ATOM 22 N2 G A 562 188.939-103.969 -85.846 1.00 60.66 N
ATOM 23 N3 G A 562 188.572-101.796 -86.562 1.00 57.00 N
ATOM 24 C4 G A 562 187.684-100.790 -86.507 1.00 55.37 C
ATOM 25 P U A 563 187.337 -99.032 -92.350 1.00 57.50 P
ATOM 26 OP1 U A 563 187.871 -98.829 -93.730 1.00 44.60 O
ATOM 27 OP2 U A 563 185.937 -98.660 -92.062 1.00 68.02 O
ATOM 28 O5' U A 563 187.595-100.529 -91.896 1.00 48.67 O
TER
ATOM 1 O3' G B 535 195.010-106.260 -84.661 1.00 64.44 O
ATOM 2 P C B 536 194.494-107.736 -85.058 1.00 70.46 P
ATOM 3 OP1 C B 536 194.036-108.386 -83.807 1.00 74.44 O
ATOM 4 OP2 C B 536 195.576-108.381 -85.850 1.00 61.63 O
ATOM 5 O5' C B 536 193.238-107.441 -85.990 1.00 64.08 O
ATOM 6 C5' C B 536 192.021-107.001 -85.431 1.00 53.69 C
ATOM 7 C4' C B 536 191.008-106.690 -86.495 1.00 63.44 C
ATOM 8 O4' C B 536 191.534-105.680 -87.398 1.00 61.24 O
ATOM 9 C3' C B 536 190.628-107.838 -87.420 1.00 60.99 C
ATOM 10 O3' C B 536 189.699-108.738 -86.852 1.00 56.15 O
ATOM 11 C2' C B 536 190.098-107.106 -88.651 1.00 63.22 C
ATOM 12 O2' C B 536 188.787-106.586 -88.424 1.00 54.29 O
ATOM 13 C1' C B 536 191.083-105.944 -88.722 1.00 62.41 C
ATOM 14 N1 C B 536 192.246-106.302 -89.537 1.00 67.82 N
ATOM 15 C2 C B 536 192.109-106.153 -90.908 1.00 65.73 C
ATOM 16 O2 C B 536 191.012-105.707 -91.304 1.00 61.31 O
ATOM 17 N3 C B 536 193.162-106.476 -91.704 1.00 58.04 N
ATOM 18 C4 C B 536 194.282-106.938 -91.140 1.00 51.30 C
ATOM 19 N4 C B 536 195.305-107.265 -91.917 1.00 63.05 N
ATOM 20 C5 C B 536 194.432-107.105 -89.744 1.00 55.83 C
ATOM 21 C6 C B 536 193.390-106.784 -88.976 1.00 64.27 C
ATOM 22 P U B 537 189.789-110.299 -87.229 1.00 76.95 P
ATOM 23 OP1 U B 537 188.591-110.976 -86.598 1.00 51.49 O
ATOM 24 OP2 U B 537 191.155-110.746 -86.860 1.00 61.02 O
ATOM 25 O5' U B 537 189.644-110.299 -88.826 1.00 64.93 O
TER
Atoms:
OP1: (185.720,-94.342,-90.490)
OP2: (184.151,-95.510,-88.795)
C3': (188.140,-98.301,-89.943)
C1': (188.982,-99.085,-87.890)
C5': (187.956,-95.884,-89.109)
O6: (184.944,-102.118,-84.528)
O4': (189.006,-97.671,-87.853)
C8: (186.679,-98.839,-86.802)
C2: (188.162,-102.869,-85.897)
C6: (186.014,-101.927,-85.160)
C5: (186.455,-100.760,-85.877)
C4: (187.684,-100.790,-86.507)
P: (185.515,-95.011,-89.158)
C4': (188.774,-97.141,-89.190)
C2': (188.877,-99.501,-89.353)
O2': (190.199,-99.590,-89.870)
N1: (186.964,-102.946,-85.227)
N2: (188.939,-103.969,-85.846)
N3: (188.572,-101.796,-86.562)
N7: (185.838,-99.522,-86.083)
N9: (187.827,-99.555,-87.099)
O5': (186.576,-96.171,-88.982)
O3': (188.273,-98.176,-91.352)
OP2: (184.151,-95.510,-88.795)
C3': (188.140,-98.301,-89.943)
C1': (188.982,-99.085,-87.890)
C5': (187.956,-95.884,-89.109)
O6: (184.944,-102.118,-84.528)
O4': (189.006,-97.671,-87.853)
C8: (186.679,-98.839,-86.802)
C2: (188.162,-102.869,-85.897)
C6: (186.014,-101.927,-85.160)
C5: (186.455,-100.760,-85.877)
C4: (187.684,-100.790,-86.507)
P: (185.515,-95.011,-89.158)
C4': (188.774,-97.141,-89.190)
C2': (188.877,-99.501,-89.353)
O2': (190.199,-99.590,-89.870)
N1: (186.964,-102.946,-85.227)
N2: (188.939,-103.969,-85.846)
N3: (188.572,-101.796,-86.562)
N7: (185.838,-99.522,-86.083)
N9: (187.827,-99.555,-87.099)
O5': (186.576,-96.171,-88.982)
O3': (188.273,-98.176,-91.352)
C2: (192.109,-106.153,-90.908)
OP1: (194.036,-108.386,-83.807)
OP2: (195.576,-108.381,-85.850)
C4: (194.282,-106.938,-91.140)
O5': (193.238,-107.441,-85.990)
C3': (190.628,-107.838,-87.420)
C1': (191.083,-105.944,-88.722)
O4': (191.534,-105.680,-87.398)
C5': (192.021,-107.001,-85.431)
P: (194.494,-107.736,-85.058)
O2: (191.012,-105.707,-91.304)
C4': (191.008,-106.690,-86.495)
C2': (190.098,-107.106,-88.651)
O2': (188.787,-106.586,-88.424)
N1: (192.246,-106.302,-89.537)
N3: (193.162,-106.476,-91.704)
N4: (195.305,-107.265,-91.917)
C6: (193.390,-106.784,-88.976)
C5: (194.432,-107.105,-89.744)
O3': (189.699,-108.738,-86.852)
OP1: (194.036,-108.386,-83.807)
OP2: (195.576,-108.381,-85.850)
C4: (194.282,-106.938,-91.140)
O5': (193.238,-107.441,-85.990)
C3': (190.628,-107.838,-87.420)
C1': (191.083,-105.944,-88.722)
O4': (191.534,-105.680,-87.398)
C5': (192.021,-107.001,-85.431)
P: (194.494,-107.736,-85.058)
O2: (191.012,-105.707,-91.304)
C4': (191.008,-106.690,-86.495)
C2': (190.098,-107.106,-88.651)
O2': (188.787,-106.586,-88.424)
N1: (192.246,-106.302,-89.537)
N3: (193.162,-106.476,-91.704)
N4: (195.305,-107.265,-91.917)
C6: (193.390,-106.784,-88.976)
C5: (194.432,-107.105,-89.744)
O3': (189.699,-108.738,-86.852)
Image (generated by PyMOL):