Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A2456:A2453
Extra
PDB:
ATOM 1 O3' G A2455 -15.984 107.716 174.270 1.00 8.65 O
ATOM 2 P C A2456 -16.092 108.662 172.968 1.00 10.45 P
ATOM 3 OP1 C A2456 -14.963 109.622 173.040 1.00 22.63 O
ATOM 4 OP2 C A2456 -17.484 109.161 172.833 1.00 22.63 O
ATOM 5 O5' C A2456 -15.805 107.700 171.743 1.00 0.79 O
ATOM 6 C5' C A2456 -14.559 107.015 171.658 1.00 0.79 C
ATOM 7 C4' C A2456 -14.619 105.983 170.582 1.00 0.79 C
ATOM 8 O4' C A2456 -15.629 104.991 170.898 1.00 0.79 O
ATOM 9 C3' C A2456 -15.071 106.536 169.257 1.00 0.79 C
ATOM 10 O3' C A2456 -14.024 107.230 168.625 1.00 0.79 O
ATOM 11 C2' C A2456 -15.618 105.300 168.548 1.00 0.79 C
ATOM 12 O2' C A2456 -14.674 104.427 167.962 1.00 0.79 O
ATOM 13 C1' C A2456 -16.274 104.571 169.709 1.00 0.79 C
ATOM 14 N1 C A2456 -17.692 104.937 169.787 1.00 1.14 N
ATOM 15 C2 C A2456 -18.583 104.337 168.890 1.00 1.14 C
ATOM 16 O2 C A2456 -18.145 103.495 168.074 1.00 1.14 O
ATOM 17 N3 C A2456 -19.881 104.686 168.923 1.00 1.14 N
ATOM 18 C4 C A2456 -20.299 105.598 169.795 1.00 1.14 C
ATOM 19 N4 C A2456 -21.579 105.938 169.766 1.00 1.14 N
ATOM 20 C5 C A2456 -19.420 106.211 170.728 1.00 1.14 C
ATOM 21 C6 C A2456 -18.138 105.854 170.694 1.00 1.14 C
ATOM 22 P U A2457 -14.371 108.517 167.740 1.00 10.35 P
ATOM 23 OP1 U A2457 -13.093 109.166 167.367 1.00 10.35 O
ATOM 24 OP2 U A2457 -15.459 109.315 168.398 1.00 10.35 O
ATOM 25 O5' U A2457 -14.958 107.866 166.420 1.00 6.97 O
TER
ATOM 1 O3' C B2452 -24.782 107.545 175.000 1.00 1.04 O
ATOM 2 P G B2453 -24.650 108.868 174.090 1.00 11.17 P
ATOM 3 OP1 G B2453 -23.984 109.896 174.922 1.00 28.87 O
ATOM 4 OP2 G B2453 -25.966 109.165 173.469 1.00 28.87 O
ATOM 5 O5' G B2453 -23.621 108.466 172.947 1.00 0.79 O
ATOM 6 C5' G B2453 -22.353 107.893 173.272 1.00 0.79 C
ATOM 7 C4' G B2453 -21.237 108.752 172.735 1.00 0.79 C
ATOM 8 O4' G B2453 -21.396 108.912 171.308 1.00 0.79 O
ATOM 9 C3' G B2453 -21.174 110.167 173.279 1.00 0.79 C
ATOM 10 O3' G B2453 -20.386 110.179 174.457 1.00 0.79 O
ATOM 11 C2' G B2453 -20.469 110.935 172.166 1.00 0.79 C
ATOM 12 O2' G B2453 -19.063 110.835 172.260 1.00 0.79 O
ATOM 13 C1' G B2453 -20.936 110.189 170.914 1.00 0.79 C
ATOM 14 N9 G B2453 -21.985 110.825 170.126 1.00 30.61 N
ATOM 15 C8 G B2453 -22.103 110.797 168.761 1.00 30.61 C
ATOM 16 N7 G B2453 -23.167 111.408 168.324 1.00 30.61 N
ATOM 17 C5 G B2453 -23.778 111.882 169.471 1.00 30.61 C
ATOM 18 C6 G B2453 -24.977 112.614 169.632 1.00 30.61 C
ATOM 19 O6 G B2453 -25.772 112.993 168.774 1.00 30.61 O
ATOM 20 N1 G B2453 -25.227 112.888 170.961 1.00 30.61 N
ATOM 21 C2 G B2453 -24.434 112.496 172.007 1.00 30.61 C
ATOM 22 N2 G B2453 -24.856 112.846 173.225 1.00 30.61 N
ATOM 23 N3 G B2453 -23.317 111.808 171.874 1.00 30.61 N
ATOM 24 C4 G B2453 -23.053 111.537 170.589 1.00 30.61 C
ATOM 25 P A B2454 -20.824 111.095 175.689 1.00 16.38 P
ATOM 26 OP1 A B2454 -21.984 110.483 176.386 1.00 29.39 O
ATOM 27 OP2 A B2454 -20.949 112.473 175.145 1.00 29.39 O
ATOM 28 O5' A B2454 -19.554 111.018 176.647 1.00 1.05 O
TER
ATOM 2 P C A2456 -16.092 108.662 172.968 1.00 10.45 P
ATOM 3 OP1 C A2456 -14.963 109.622 173.040 1.00 22.63 O
ATOM 4 OP2 C A2456 -17.484 109.161 172.833 1.00 22.63 O
ATOM 5 O5' C A2456 -15.805 107.700 171.743 1.00 0.79 O
ATOM 6 C5' C A2456 -14.559 107.015 171.658 1.00 0.79 C
ATOM 7 C4' C A2456 -14.619 105.983 170.582 1.00 0.79 C
ATOM 8 O4' C A2456 -15.629 104.991 170.898 1.00 0.79 O
ATOM 9 C3' C A2456 -15.071 106.536 169.257 1.00 0.79 C
ATOM 10 O3' C A2456 -14.024 107.230 168.625 1.00 0.79 O
ATOM 11 C2' C A2456 -15.618 105.300 168.548 1.00 0.79 C
ATOM 12 O2' C A2456 -14.674 104.427 167.962 1.00 0.79 O
ATOM 13 C1' C A2456 -16.274 104.571 169.709 1.00 0.79 C
ATOM 14 N1 C A2456 -17.692 104.937 169.787 1.00 1.14 N
ATOM 15 C2 C A2456 -18.583 104.337 168.890 1.00 1.14 C
ATOM 16 O2 C A2456 -18.145 103.495 168.074 1.00 1.14 O
ATOM 17 N3 C A2456 -19.881 104.686 168.923 1.00 1.14 N
ATOM 18 C4 C A2456 -20.299 105.598 169.795 1.00 1.14 C
ATOM 19 N4 C A2456 -21.579 105.938 169.766 1.00 1.14 N
ATOM 20 C5 C A2456 -19.420 106.211 170.728 1.00 1.14 C
ATOM 21 C6 C A2456 -18.138 105.854 170.694 1.00 1.14 C
ATOM 22 P U A2457 -14.371 108.517 167.740 1.00 10.35 P
ATOM 23 OP1 U A2457 -13.093 109.166 167.367 1.00 10.35 O
ATOM 24 OP2 U A2457 -15.459 109.315 168.398 1.00 10.35 O
ATOM 25 O5' U A2457 -14.958 107.866 166.420 1.00 6.97 O
TER
ATOM 1 O3' C B2452 -24.782 107.545 175.000 1.00 1.04 O
ATOM 2 P G B2453 -24.650 108.868 174.090 1.00 11.17 P
ATOM 3 OP1 G B2453 -23.984 109.896 174.922 1.00 28.87 O
ATOM 4 OP2 G B2453 -25.966 109.165 173.469 1.00 28.87 O
ATOM 5 O5' G B2453 -23.621 108.466 172.947 1.00 0.79 O
ATOM 6 C5' G B2453 -22.353 107.893 173.272 1.00 0.79 C
ATOM 7 C4' G B2453 -21.237 108.752 172.735 1.00 0.79 C
ATOM 8 O4' G B2453 -21.396 108.912 171.308 1.00 0.79 O
ATOM 9 C3' G B2453 -21.174 110.167 173.279 1.00 0.79 C
ATOM 10 O3' G B2453 -20.386 110.179 174.457 1.00 0.79 O
ATOM 11 C2' G B2453 -20.469 110.935 172.166 1.00 0.79 C
ATOM 12 O2' G B2453 -19.063 110.835 172.260 1.00 0.79 O
ATOM 13 C1' G B2453 -20.936 110.189 170.914 1.00 0.79 C
ATOM 14 N9 G B2453 -21.985 110.825 170.126 1.00 30.61 N
ATOM 15 C8 G B2453 -22.103 110.797 168.761 1.00 30.61 C
ATOM 16 N7 G B2453 -23.167 111.408 168.324 1.00 30.61 N
ATOM 17 C5 G B2453 -23.778 111.882 169.471 1.00 30.61 C
ATOM 18 C6 G B2453 -24.977 112.614 169.632 1.00 30.61 C
ATOM 19 O6 G B2453 -25.772 112.993 168.774 1.00 30.61 O
ATOM 20 N1 G B2453 -25.227 112.888 170.961 1.00 30.61 N
ATOM 21 C2 G B2453 -24.434 112.496 172.007 1.00 30.61 C
ATOM 22 N2 G B2453 -24.856 112.846 173.225 1.00 30.61 N
ATOM 23 N3 G B2453 -23.317 111.808 171.874 1.00 30.61 N
ATOM 24 C4 G B2453 -23.053 111.537 170.589 1.00 30.61 C
ATOM 25 P A B2454 -20.824 111.095 175.689 1.00 16.38 P
ATOM 26 OP1 A B2454 -21.984 110.483 176.386 1.00 29.39 O
ATOM 27 OP2 A B2454 -20.949 112.473 175.145 1.00 29.39 O
ATOM 28 O5' A B2454 -19.554 111.018 176.647 1.00 1.05 O
TER
Atoms:
C2: (-18.583,104.337,168.890)
OP1: (-14.963,109.622,173.040)
OP2: (-17.484,109.161,172.833)
C4: (-20.299,105.598,169.795)
O5': (-15.805,107.700,171.743)
C3': (-15.071,106.536,169.257)
C1': (-16.274,104.571,169.709)
O4': (-15.629,104.991,170.898)
C5': (-14.559,107.015,171.658)
P: (-16.092,108.662,172.968)
O2: (-18.145,103.495,168.074)
C4': (-14.619,105.983,170.582)
C2': (-15.618,105.300,168.548)
O2': (-14.674,104.427,167.962)
N1: (-17.692,104.937,169.787)
N3: (-19.881,104.686,168.923)
N4: (-21.579,105.938,169.766)
C6: (-18.138,105.854,170.694)
C5: (-19.420,106.211,170.728)
O3': (-14.024,107.230,168.625)
OP1: (-14.963,109.622,173.040)
OP2: (-17.484,109.161,172.833)
C4: (-20.299,105.598,169.795)
O5': (-15.805,107.700,171.743)
C3': (-15.071,106.536,169.257)
C1': (-16.274,104.571,169.709)
O4': (-15.629,104.991,170.898)
C5': (-14.559,107.015,171.658)
P: (-16.092,108.662,172.968)
O2: (-18.145,103.495,168.074)
C4': (-14.619,105.983,170.582)
C2': (-15.618,105.300,168.548)
O2': (-14.674,104.427,167.962)
N1: (-17.692,104.937,169.787)
N3: (-19.881,104.686,168.923)
N4: (-21.579,105.938,169.766)
C6: (-18.138,105.854,170.694)
C5: (-19.420,106.211,170.728)
O3': (-14.024,107.230,168.625)
OP1: (-23.984,109.896,174.922)
OP2: (-25.966,109.165,173.469)
C3': (-21.174,110.167,173.279)
C1': (-20.936,110.189,170.914)
C5': (-22.353,107.893,173.272)
O6: (-25.772,112.993,168.774)
O4': (-21.396,108.912,171.308)
C8: (-22.103,110.797,168.761)
C2: (-24.434,112.496,172.007)
C6: (-24.977,112.614,169.632)
C5: (-23.778,111.882,169.471)
C4: (-23.053,111.537,170.589)
P: (-24.650,108.868,174.090)
C4': (-21.237,108.752,172.735)
C2': (-20.469,110.935,172.166)
O2': (-19.063,110.835,172.260)
N1: (-25.227,112.888,170.961)
N2: (-24.856,112.846,173.225)
N3: (-23.317,111.808,171.874)
N7: (-23.167,111.408,168.324)
N9: (-21.985,110.825,170.126)
O5': (-23.621,108.466,172.947)
O3': (-20.386,110.179,174.457)
OP2: (-25.966,109.165,173.469)
C3': (-21.174,110.167,173.279)
C1': (-20.936,110.189,170.914)
C5': (-22.353,107.893,173.272)
O6: (-25.772,112.993,168.774)
O4': (-21.396,108.912,171.308)
C8: (-22.103,110.797,168.761)
C2: (-24.434,112.496,172.007)
C6: (-24.977,112.614,169.632)
C5: (-23.778,111.882,169.471)
C4: (-23.053,111.537,170.589)
P: (-24.650,108.868,174.090)
C4': (-21.237,108.752,172.735)
C2': (-20.469,110.935,172.166)
O2': (-19.063,110.835,172.260)
N1: (-25.227,112.888,170.961)
N2: (-24.856,112.846,173.225)
N3: (-23.317,111.808,171.874)
N7: (-23.167,111.408,168.324)
N9: (-21.985,110.825,170.126)
O5': (-23.621,108.466,172.947)
O3': (-20.386,110.179,174.457)
Image (generated by PyMOL):