Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1332:A1235
Extra
PDB:
ATOM 1 O3' A A1331 -139.420 11.790 20.260 1.00 50.24 O
ATOM 2 P G A1332 -138.435 12.746 21.086 1.00 34.85 P
ATOM 3 OP1 G A1332 -137.058 12.230 20.885 1.00 34.85 O
ATOM 4 OP2 G A1332 -138.978 12.845 22.472 1.00 34.85 O
ATOM 5 O5' G A1332 -138.597 14.134 20.345 1.00 34.85 O
ATOM 6 C5' G A1332 -137.586 15.123 20.416 1.00 34.85 C
ATOM 7 C4' G A1332 -138.181 16.485 20.256 1.00 34.85 C
ATOM 8 O4' G A1332 -139.576 16.344 19.881 1.00 34.85 O
ATOM 9 C3' G A1332 -138.202 17.335 21.511 1.00 34.85 C
ATOM 10 O3' G A1332 -137.002 18.058 21.698 1.00 34.85 O
ATOM 11 C2' G A1332 -139.421 18.221 21.309 1.00 34.85 C
ATOM 12 O2' G A1332 -139.118 19.320 20.477 1.00 34.85 O
ATOM 13 C1' G A1332 -140.363 17.286 20.561 1.00 34.85 C
ATOM 14 N9 G A1332 -141.259 16.570 21.484 1.00 35.07 N
ATOM 15 C8 G A1332 -141.229 15.243 21.849 1.00 35.07 C
ATOM 16 N7 G A1332 -142.165 14.941 22.708 1.00 35.07 N
ATOM 17 C5 G A1332 -142.844 16.150 22.928 1.00 35.07 C
ATOM 18 C6 G A1332 -143.958 16.471 23.767 1.00 35.07 C
ATOM 19 O6 G A1332 -144.605 15.710 24.519 1.00 35.07 O
ATOM 20 N1 G A1332 -144.299 17.826 23.669 1.00 35.07 N
ATOM 21 C2 G A1332 -143.669 18.750 22.874 1.00 35.07 C
ATOM 22 N2 G A1332 -144.133 20.002 22.899 1.00 35.07 N
ATOM 23 N3 G A1332 -142.646 18.465 22.099 1.00 35.07 N
ATOM 24 C4 G A1332 -142.289 17.161 22.176 1.00 35.07 C
ATOM 25 P U A1333 -136.001 17.661 22.874 1.00 56.19 P
ATOM 26 OP1 U A1333 -134.701 18.295 22.564 1.00 56.19 O
ATOM 27 OP2 U A1333 -136.065 16.200 23.015 1.00 56.19 O
ATOM 28 O5' U A1333 -136.649 18.354 24.141 1.00 56.19 O
TER
ATOM 1 O3' A B1234 -144.734 25.183 21.626 1.00 43.67 O
ATOM 2 P C B1235 -144.087 25.984 22.853 1.00 32.29 P
ATOM 3 OP1 C B1235 -145.195 26.503 23.678 1.00 32.29 O
ATOM 4 OP2 C B1235 -143.117 26.951 22.292 1.00 32.29 O
ATOM 5 O5' C B1235 -143.314 24.837 23.638 1.00 32.29 O
ATOM 6 C5' C B1235 -143.833 23.518 23.712 1.00 32.29 C
ATOM 7 C4' C B1235 -142.732 22.518 23.942 1.00 32.29 C
ATOM 8 O4' C B1235 -142.070 22.229 22.679 1.00 32.29 O
ATOM 9 C3' C B1235 -141.605 22.973 24.863 1.00 32.29 C
ATOM 10 O3' C B1235 -141.906 22.803 26.236 1.00 32.29 O
ATOM 11 C2' C B1235 -140.429 22.135 24.392 1.00 32.29 C
ATOM 12 O2' C B1235 -140.487 20.828 24.939 1.00 32.29 O
ATOM 13 C1' C B1235 -140.685 22.061 22.884 1.00 32.29 C
ATOM 14 N1 C B1235 -139.971 23.137 22.164 1.00 32.82 N
ATOM 15 C2 C B1235 -138.687 22.886 21.657 1.00 32.82 C
ATOM 16 O2 C B1235 -138.220 21.745 21.811 1.00 32.82 O
ATOM 17 N3 C B1235 -138.001 23.887 21.026 1.00 32.82 N
ATOM 18 C4 C B1235 -138.552 25.105 20.897 1.00 32.82 C
ATOM 19 N4 C B1235 -137.869 26.064 20.261 1.00 32.82 N
ATOM 20 C5 C B1235 -139.854 25.384 21.421 1.00 32.82 C
ATOM 21 C6 C B1235 -140.518 24.390 22.041 1.00 32.82 C
ATOM 22 P A B1236 -140.834 23.219 27.376 1.00 32.81 P
ATOM 23 OP1 A B1236 -139.518 23.382 26.715 1.00 32.81 O
ATOM 24 OP2 A B1236 -140.956 22.227 28.472 1.00 32.81 O
ATOM 25 O5' A B1236 -141.371 24.634 27.869 1.00 32.81 O
TER
ATOM 2 P G A1332 -138.435 12.746 21.086 1.00 34.85 P
ATOM 3 OP1 G A1332 -137.058 12.230 20.885 1.00 34.85 O
ATOM 4 OP2 G A1332 -138.978 12.845 22.472 1.00 34.85 O
ATOM 5 O5' G A1332 -138.597 14.134 20.345 1.00 34.85 O
ATOM 6 C5' G A1332 -137.586 15.123 20.416 1.00 34.85 C
ATOM 7 C4' G A1332 -138.181 16.485 20.256 1.00 34.85 C
ATOM 8 O4' G A1332 -139.576 16.344 19.881 1.00 34.85 O
ATOM 9 C3' G A1332 -138.202 17.335 21.511 1.00 34.85 C
ATOM 10 O3' G A1332 -137.002 18.058 21.698 1.00 34.85 O
ATOM 11 C2' G A1332 -139.421 18.221 21.309 1.00 34.85 C
ATOM 12 O2' G A1332 -139.118 19.320 20.477 1.00 34.85 O
ATOM 13 C1' G A1332 -140.363 17.286 20.561 1.00 34.85 C
ATOM 14 N9 G A1332 -141.259 16.570 21.484 1.00 35.07 N
ATOM 15 C8 G A1332 -141.229 15.243 21.849 1.00 35.07 C
ATOM 16 N7 G A1332 -142.165 14.941 22.708 1.00 35.07 N
ATOM 17 C5 G A1332 -142.844 16.150 22.928 1.00 35.07 C
ATOM 18 C6 G A1332 -143.958 16.471 23.767 1.00 35.07 C
ATOM 19 O6 G A1332 -144.605 15.710 24.519 1.00 35.07 O
ATOM 20 N1 G A1332 -144.299 17.826 23.669 1.00 35.07 N
ATOM 21 C2 G A1332 -143.669 18.750 22.874 1.00 35.07 C
ATOM 22 N2 G A1332 -144.133 20.002 22.899 1.00 35.07 N
ATOM 23 N3 G A1332 -142.646 18.465 22.099 1.00 35.07 N
ATOM 24 C4 G A1332 -142.289 17.161 22.176 1.00 35.07 C
ATOM 25 P U A1333 -136.001 17.661 22.874 1.00 56.19 P
ATOM 26 OP1 U A1333 -134.701 18.295 22.564 1.00 56.19 O
ATOM 27 OP2 U A1333 -136.065 16.200 23.015 1.00 56.19 O
ATOM 28 O5' U A1333 -136.649 18.354 24.141 1.00 56.19 O
TER
ATOM 1 O3' A B1234 -144.734 25.183 21.626 1.00 43.67 O
ATOM 2 P C B1235 -144.087 25.984 22.853 1.00 32.29 P
ATOM 3 OP1 C B1235 -145.195 26.503 23.678 1.00 32.29 O
ATOM 4 OP2 C B1235 -143.117 26.951 22.292 1.00 32.29 O
ATOM 5 O5' C B1235 -143.314 24.837 23.638 1.00 32.29 O
ATOM 6 C5' C B1235 -143.833 23.518 23.712 1.00 32.29 C
ATOM 7 C4' C B1235 -142.732 22.518 23.942 1.00 32.29 C
ATOM 8 O4' C B1235 -142.070 22.229 22.679 1.00 32.29 O
ATOM 9 C3' C B1235 -141.605 22.973 24.863 1.00 32.29 C
ATOM 10 O3' C B1235 -141.906 22.803 26.236 1.00 32.29 O
ATOM 11 C2' C B1235 -140.429 22.135 24.392 1.00 32.29 C
ATOM 12 O2' C B1235 -140.487 20.828 24.939 1.00 32.29 O
ATOM 13 C1' C B1235 -140.685 22.061 22.884 1.00 32.29 C
ATOM 14 N1 C B1235 -139.971 23.137 22.164 1.00 32.82 N
ATOM 15 C2 C B1235 -138.687 22.886 21.657 1.00 32.82 C
ATOM 16 O2 C B1235 -138.220 21.745 21.811 1.00 32.82 O
ATOM 17 N3 C B1235 -138.001 23.887 21.026 1.00 32.82 N
ATOM 18 C4 C B1235 -138.552 25.105 20.897 1.00 32.82 C
ATOM 19 N4 C B1235 -137.869 26.064 20.261 1.00 32.82 N
ATOM 20 C5 C B1235 -139.854 25.384 21.421 1.00 32.82 C
ATOM 21 C6 C B1235 -140.518 24.390 22.041 1.00 32.82 C
ATOM 22 P A B1236 -140.834 23.219 27.376 1.00 32.81 P
ATOM 23 OP1 A B1236 -139.518 23.382 26.715 1.00 32.81 O
ATOM 24 OP2 A B1236 -140.956 22.227 28.472 1.00 32.81 O
ATOM 25 O5' A B1236 -141.371 24.634 27.869 1.00 32.81 O
TER
Atoms:
OP1: (-137.058,12.230,20.885)
OP2: (-138.978,12.845,22.472)
C3': (-138.202,17.335,21.511)
C1': (-140.363,17.286,20.561)
C5': (-137.586,15.123,20.416)
O6: (-144.605,15.710,24.519)
O4': (-139.576,16.344,19.881)
C8: (-141.229,15.243,21.849)
C2: (-143.669,18.750,22.874)
C6: (-143.958,16.471,23.767)
C5: (-142.844,16.150,22.928)
C4: (-142.289,17.161,22.176)
P: (-138.435,12.746,21.086)
C4': (-138.181,16.485,20.256)
C2': (-139.421,18.221,21.309)
O2': (-139.118,19.320,20.477)
N1: (-144.299,17.826,23.669)
N2: (-144.133,20.002,22.899)
N3: (-142.646,18.465,22.099)
N7: (-142.165,14.941,22.708)
N9: (-141.259,16.570,21.484)
O5': (-138.597,14.134,20.345)
O3': (-137.002,18.058,21.698)
OP2: (-138.978,12.845,22.472)
C3': (-138.202,17.335,21.511)
C1': (-140.363,17.286,20.561)
C5': (-137.586,15.123,20.416)
O6: (-144.605,15.710,24.519)
O4': (-139.576,16.344,19.881)
C8: (-141.229,15.243,21.849)
C2: (-143.669,18.750,22.874)
C6: (-143.958,16.471,23.767)
C5: (-142.844,16.150,22.928)
C4: (-142.289,17.161,22.176)
P: (-138.435,12.746,21.086)
C4': (-138.181,16.485,20.256)
C2': (-139.421,18.221,21.309)
O2': (-139.118,19.320,20.477)
N1: (-144.299,17.826,23.669)
N2: (-144.133,20.002,22.899)
N3: (-142.646,18.465,22.099)
N7: (-142.165,14.941,22.708)
N9: (-141.259,16.570,21.484)
O5': (-138.597,14.134,20.345)
O3': (-137.002,18.058,21.698)
C2: (-138.687,22.886,21.657)
OP1: (-145.195,26.503,23.678)
OP2: (-143.117,26.951,22.292)
C4: (-138.552,25.105,20.897)
O5': (-143.314,24.837,23.638)
C3': (-141.605,22.973,24.863)
C1': (-140.685,22.061,22.884)
O4': (-142.070,22.229,22.679)
C5': (-143.833,23.518,23.712)
P: (-144.087,25.984,22.853)
O2: (-138.220,21.745,21.811)
C4': (-142.732,22.518,23.942)
C2': (-140.429,22.135,24.392)
O2': (-140.487,20.828,24.939)
N1: (-139.971,23.137,22.164)
N3: (-138.001,23.887,21.026)
N4: (-137.869,26.064,20.261)
C6: (-140.518,24.390,22.041)
C5: (-139.854,25.384,21.421)
O3': (-141.906,22.803,26.236)
OP1: (-145.195,26.503,23.678)
OP2: (-143.117,26.951,22.292)
C4: (-138.552,25.105,20.897)
O5': (-143.314,24.837,23.638)
C3': (-141.605,22.973,24.863)
C1': (-140.685,22.061,22.884)
O4': (-142.070,22.229,22.679)
C5': (-143.833,23.518,23.712)
P: (-144.087,25.984,22.853)
O2: (-138.220,21.745,21.811)
C4': (-142.732,22.518,23.942)
C2': (-140.429,22.135,24.392)
O2': (-140.487,20.828,24.939)
N1: (-139.971,23.137,22.164)
N3: (-138.001,23.887,21.026)
N4: (-137.869,26.064,20.261)
C6: (-140.518,24.390,22.041)
C5: (-139.854,25.384,21.421)
O3': (-141.906,22.803,26.236)
Image (generated by PyMOL):