Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A519:A534
Extra
PDB:
ATOM 1 O3' A A 518 -107.181 7.037 -44.667 1.00 14.02 O
ATOM 2 P G A 519 -105.597 6.883 -44.546 1.00 15.64 P
ATOM 3 OP1 G A 519 -105.205 5.620 -45.259 1.00 15.64 O
ATOM 4 OP2 G A 519 -105.274 7.037 -43.101 1.00 15.64 O
ATOM 5 O5' G A 519 -105.066 8.145 -45.353 1.00 15.64 O
ATOM 6 C5' G A 519 -104.396 9.192 -44.674 1.00 15.64 C
ATOM 7 C4' G A 519 -104.711 10.538 -45.262 1.00 15.64 C
ATOM 8 O4' G A 519 -105.734 11.179 -44.464 1.00 15.64 O
ATOM 9 C3' G A 519 -103.550 11.526 -45.266 1.00 15.64 C
ATOM 10 O3' G A 519 -102.707 11.376 -46.395 1.00 15.64 O
ATOM 11 C2' G A 519 -104.244 12.868 -45.200 1.00 15.64 C
ATOM 12 O2' G A 519 -104.715 13.258 -46.480 1.00 15.64 O
ATOM 13 C1' G A 519 -105.435 12.540 -44.307 1.00 15.64 C
ATOM 14 N9 G A 519 -105.108 12.764 -42.909 1.00 15.41 N
ATOM 15 C8 G A 519 -104.971 11.844 -41.908 1.00 15.41 C
ATOM 16 N7 G A 519 -104.631 12.407 -40.786 1.00 15.41 N
ATOM 17 C5 G A 519 -104.540 13.765 -41.098 1.00 15.41 C
ATOM 18 C6 G A 519 -104.204 14.892 -40.307 1.00 15.41 C
ATOM 19 O6 G A 519 -103.922 14.929 -39.106 1.00 15.41 O
ATOM 20 N1 G A 519 -104.224 16.071 -41.047 1.00 15.41 N
ATOM 21 C2 G A 519 -104.531 16.165 -42.379 1.00 15.41 C
ATOM 22 N2 G A 519 -104.499 17.400 -42.908 1.00 15.41 N
ATOM 23 N3 G A 519 -104.843 15.123 -43.133 1.00 15.41 N
ATOM 24 C4 G A 519 -104.827 13.987 -42.417 1.00 15.41 C
ATOM 25 P C A 520 -101.154 11.740 -46.291 1.00 5.16 P
ATOM 26 OP1 C A 520 -100.524 11.338 -47.575 1.00 5.16 O
ATOM 27 OP2 C A 520 -100.653 11.154 -45.037 1.00 5.16 O
ATOM 28 O5' C A 520 -101.177 13.330 -46.181 1.00 5.16 O
TER
ATOM 1 O3' A B 533 -104.685 21.250 -46.681 1.00 23.87 O
ATOM 2 P C B 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 3 OP1 C B 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 4 OP2 C B 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 5 O5' C B 534 -105.021 19.063 -47.806 1.00 26.37 O
ATOM 6 C5' C B 534 -104.401 18.236 -46.839 1.00 26.37 C
ATOM 7 C4' C B 534 -105.280 17.072 -46.511 1.00 26.37 C
ATOM 8 O4' C B 534 -106.244 17.474 -45.517 1.00 26.37 O
ATOM 9 C3' C B 534 -106.102 16.553 -47.676 1.00 26.37 C
ATOM 10 O3' C B 534 -105.414 15.569 -48.412 1.00 26.37 O
ATOM 11 C2' C B 534 -107.372 16.038 -47.027 1.00 26.37 C
ATOM 12 O2' C B 534 -107.220 14.695 -46.595 1.00 26.37 O
ATOM 13 C1' C B 534 -107.502 16.934 -45.808 1.00 26.37 C
ATOM 14 N1 C B 534 -108.418 18.027 -46.043 1.00 26.45 N
ATOM 15 C2 C B 534 -109.723 17.665 -46.334 1.00 26.45 C
ATOM 16 O2 C B 534 -110.020 16.466 -46.389 1.00 26.45 O
ATOM 17 N3 C B 534 -110.628 18.633 -46.548 1.00 26.45 N
ATOM 18 C4 C B 534 -110.242 19.906 -46.476 1.00 26.45 C
ATOM 19 N4 C B 534 -111.183 20.821 -46.711 1.00 26.45 N
ATOM 20 C5 C B 534 -108.899 20.295 -46.172 1.00 26.45 C
ATOM 21 C6 C B 534 -108.014 19.323 -45.960 1.00 26.45 C
ATOM 22 P G B 535 -104.848 15.904 -49.862 1.00 26.82 P
ATOM 23 OP1 G B 535 -103.579 15.151 -50.020 1.00 26.82 O
ATOM 24 OP2 G B 535 -104.821 17.374 -49.977 1.00 26.82 O
ATOM 25 O5' G B 535 -105.974 15.309 -50.822 1.00 26.82 O
TER
ATOM 2 P G A 519 -105.597 6.883 -44.546 1.00 15.64 P
ATOM 3 OP1 G A 519 -105.205 5.620 -45.259 1.00 15.64 O
ATOM 4 OP2 G A 519 -105.274 7.037 -43.101 1.00 15.64 O
ATOM 5 O5' G A 519 -105.066 8.145 -45.353 1.00 15.64 O
ATOM 6 C5' G A 519 -104.396 9.192 -44.674 1.00 15.64 C
ATOM 7 C4' G A 519 -104.711 10.538 -45.262 1.00 15.64 C
ATOM 8 O4' G A 519 -105.734 11.179 -44.464 1.00 15.64 O
ATOM 9 C3' G A 519 -103.550 11.526 -45.266 1.00 15.64 C
ATOM 10 O3' G A 519 -102.707 11.376 -46.395 1.00 15.64 O
ATOM 11 C2' G A 519 -104.244 12.868 -45.200 1.00 15.64 C
ATOM 12 O2' G A 519 -104.715 13.258 -46.480 1.00 15.64 O
ATOM 13 C1' G A 519 -105.435 12.540 -44.307 1.00 15.64 C
ATOM 14 N9 G A 519 -105.108 12.764 -42.909 1.00 15.41 N
ATOM 15 C8 G A 519 -104.971 11.844 -41.908 1.00 15.41 C
ATOM 16 N7 G A 519 -104.631 12.407 -40.786 1.00 15.41 N
ATOM 17 C5 G A 519 -104.540 13.765 -41.098 1.00 15.41 C
ATOM 18 C6 G A 519 -104.204 14.892 -40.307 1.00 15.41 C
ATOM 19 O6 G A 519 -103.922 14.929 -39.106 1.00 15.41 O
ATOM 20 N1 G A 519 -104.224 16.071 -41.047 1.00 15.41 N
ATOM 21 C2 G A 519 -104.531 16.165 -42.379 1.00 15.41 C
ATOM 22 N2 G A 519 -104.499 17.400 -42.908 1.00 15.41 N
ATOM 23 N3 G A 519 -104.843 15.123 -43.133 1.00 15.41 N
ATOM 24 C4 G A 519 -104.827 13.987 -42.417 1.00 15.41 C
ATOM 25 P C A 520 -101.154 11.740 -46.291 1.00 5.16 P
ATOM 26 OP1 C A 520 -100.524 11.338 -47.575 1.00 5.16 O
ATOM 27 OP2 C A 520 -100.653 11.154 -45.037 1.00 5.16 O
ATOM 28 O5' C A 520 -101.177 13.330 -46.181 1.00 5.16 O
TER
ATOM 1 O3' A B 533 -104.685 21.250 -46.681 1.00 23.87 O
ATOM 2 P C B 534 -104.490 20.525 -48.086 1.00 26.37 P
ATOM 3 OP1 C B 534 -103.034 20.486 -48.349 1.00 26.37 O
ATOM 4 OP2 C B 534 -105.376 21.199 -49.052 1.00 26.37 O
ATOM 5 O5' C B 534 -105.021 19.063 -47.806 1.00 26.37 O
ATOM 6 C5' C B 534 -104.401 18.236 -46.839 1.00 26.37 C
ATOM 7 C4' C B 534 -105.280 17.072 -46.511 1.00 26.37 C
ATOM 8 O4' C B 534 -106.244 17.474 -45.517 1.00 26.37 O
ATOM 9 C3' C B 534 -106.102 16.553 -47.676 1.00 26.37 C
ATOM 10 O3' C B 534 -105.414 15.569 -48.412 1.00 26.37 O
ATOM 11 C2' C B 534 -107.372 16.038 -47.027 1.00 26.37 C
ATOM 12 O2' C B 534 -107.220 14.695 -46.595 1.00 26.37 O
ATOM 13 C1' C B 534 -107.502 16.934 -45.808 1.00 26.37 C
ATOM 14 N1 C B 534 -108.418 18.027 -46.043 1.00 26.45 N
ATOM 15 C2 C B 534 -109.723 17.665 -46.334 1.00 26.45 C
ATOM 16 O2 C B 534 -110.020 16.466 -46.389 1.00 26.45 O
ATOM 17 N3 C B 534 -110.628 18.633 -46.548 1.00 26.45 N
ATOM 18 C4 C B 534 -110.242 19.906 -46.476 1.00 26.45 C
ATOM 19 N4 C B 534 -111.183 20.821 -46.711 1.00 26.45 N
ATOM 20 C5 C B 534 -108.899 20.295 -46.172 1.00 26.45 C
ATOM 21 C6 C B 534 -108.014 19.323 -45.960 1.00 26.45 C
ATOM 22 P G B 535 -104.848 15.904 -49.862 1.00 26.82 P
ATOM 23 OP1 G B 535 -103.579 15.151 -50.020 1.00 26.82 O
ATOM 24 OP2 G B 535 -104.821 17.374 -49.977 1.00 26.82 O
ATOM 25 O5' G B 535 -105.974 15.309 -50.822 1.00 26.82 O
TER
Atoms:
OP1: (-105.205,5.620,-45.259)
OP2: (-105.274,7.037,-43.101)
C3': (-103.550,11.526,-45.266)
C1': (-105.435,12.540,-44.307)
C5': (-104.396,9.192,-44.674)
O6: (-103.922,14.929,-39.106)
O4': (-105.734,11.179,-44.464)
C8: (-104.971,11.844,-41.908)
C2: (-104.531,16.165,-42.379)
C6: (-104.204,14.892,-40.307)
C5: (-104.540,13.765,-41.098)
C4: (-104.827,13.987,-42.417)
P: (-105.597,6.883,-44.546)
C4': (-104.711,10.538,-45.262)
C2': (-104.244,12.868,-45.200)
O2': (-104.715,13.258,-46.480)
N1: (-104.224,16.071,-41.047)
N2: (-104.499,17.400,-42.908)
N3: (-104.843,15.123,-43.133)
N7: (-104.631,12.407,-40.786)
N9: (-105.108,12.764,-42.909)
O5': (-105.066,8.145,-45.353)
O3': (-102.707,11.376,-46.395)
OP2: (-105.274,7.037,-43.101)
C3': (-103.550,11.526,-45.266)
C1': (-105.435,12.540,-44.307)
C5': (-104.396,9.192,-44.674)
O6: (-103.922,14.929,-39.106)
O4': (-105.734,11.179,-44.464)
C8: (-104.971,11.844,-41.908)
C2: (-104.531,16.165,-42.379)
C6: (-104.204,14.892,-40.307)
C5: (-104.540,13.765,-41.098)
C4: (-104.827,13.987,-42.417)
P: (-105.597,6.883,-44.546)
C4': (-104.711,10.538,-45.262)
C2': (-104.244,12.868,-45.200)
O2': (-104.715,13.258,-46.480)
N1: (-104.224,16.071,-41.047)
N2: (-104.499,17.400,-42.908)
N3: (-104.843,15.123,-43.133)
N7: (-104.631,12.407,-40.786)
N9: (-105.108,12.764,-42.909)
O5': (-105.066,8.145,-45.353)
O3': (-102.707,11.376,-46.395)
C2: (-109.723,17.665,-46.334)
OP1: (-103.034,20.486,-48.349)
OP2: (-105.376,21.199,-49.052)
C4: (-110.242,19.906,-46.476)
O5': (-105.021,19.063,-47.806)
C3': (-106.102,16.553,-47.676)
C1': (-107.502,16.934,-45.808)
O4': (-106.244,17.474,-45.517)
C5': (-104.401,18.236,-46.839)
P: (-104.490,20.525,-48.086)
O2: (-110.020,16.466,-46.389)
C4': (-105.280,17.072,-46.511)
C2': (-107.372,16.038,-47.027)
O2': (-107.220,14.695,-46.595)
N1: (-108.418,18.027,-46.043)
N3: (-110.628,18.633,-46.548)
N4: (-111.183,20.821,-46.711)
C6: (-108.014,19.323,-45.960)
C5: (-108.899,20.295,-46.172)
O3': (-105.414,15.569,-48.412)
OP1: (-103.034,20.486,-48.349)
OP2: (-105.376,21.199,-49.052)
C4: (-110.242,19.906,-46.476)
O5': (-105.021,19.063,-47.806)
C3': (-106.102,16.553,-47.676)
C1': (-107.502,16.934,-45.808)
O4': (-106.244,17.474,-45.517)
C5': (-104.401,18.236,-46.839)
P: (-104.490,20.525,-48.086)
O2: (-110.020,16.466,-46.389)
C4': (-105.280,17.072,-46.511)
C2': (-107.372,16.038,-47.027)
O2': (-107.220,14.695,-46.595)
N1: (-108.418,18.027,-46.043)
N3: (-110.628,18.633,-46.548)
N4: (-111.183,20.821,-46.711)
C6: (-108.014,19.323,-45.960)
C5: (-108.899,20.295,-46.172)
O3': (-105.414,15.569,-48.412)
Image (generated by PyMOL):