Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A583:A877
Extra
PDB:
ATOM 1 O3' G A 582 -42.886 32.947 -31.948 1.00 18.91 O
ATOM 2 P G A 583 -42.300 34.363 -32.460 1.00 14.78 P
ATOM 3 OP1 G A 583 -42.059 34.224 -33.935 1.00 14.78 O
ATOM 4 OP2 G A 583 -41.152 34.715 -31.559 1.00 14.78 O
ATOM 5 O5' G A 583 -43.527 35.359 -32.196 1.00 14.78 O
ATOM 6 C5' G A 583 -44.857 34.983 -32.540 1.00 14.78 C
ATOM 7 C4' G A 583 -45.844 35.987 -32.052 1.00 14.78 C
ATOM 8 O4' G A 583 -46.147 35.725 -30.672 1.00 14.78 O
ATOM 9 C3' G A 583 -45.353 37.416 -32.059 1.00 14.78 C
ATOM 10 O3' G A 583 -45.485 38.026 -33.326 1.00 14.78 O
ATOM 11 C2' G A 583 -46.182 38.066 -30.965 1.00 14.78 C
ATOM 12 O2' G A 583 -47.489 38.365 -31.414 1.00 14.78 O
ATOM 13 C1' G A 583 -46.271 36.939 -29.962 1.00 14.78 C
ATOM 14 N9 G A 583 -45.184 37.014 -28.985 1.00 15.09 N
ATOM 15 C8 G A 583 -44.004 36.331 -29.087 1.00 15.09 C
ATOM 16 N7 G A 583 -43.208 36.590 -28.081 1.00 15.09 N
ATOM 17 C5 G A 583 -43.904 37.490 -27.282 1.00 15.09 C
ATOM 18 C6 G A 583 -43.516 38.099 -26.062 1.00 15.09 C
ATOM 19 O6 G A 583 -42.447 37.946 -25.445 1.00 15.09 O
ATOM 20 N1 G A 583 -44.534 38.934 -25.595 1.00 15.09 N
ATOM 21 C2 G A 583 -45.742 39.137 -26.231 1.00 15.09 C
ATOM 22 N2 G A 583 -46.591 39.981 -25.632 1.00 15.09 N
ATOM 23 N3 G A 583 -46.103 38.569 -27.361 1.00 15.09 N
ATOM 24 C4 G A 583 -45.137 37.765 -27.830 1.00 15.09 C
ATOM 25 P C A 584 -44.609 39.310 -33.702 1.00 15.06 P
ATOM 26 OP1 C A 584 -45.137 39.823 -34.996 1.00 15.06 O
ATOM 27 OP2 C A 584 -43.177 38.903 -33.614 1.00 15.06 O
ATOM 28 O5' C A 584 -44.958 40.324 -32.536 1.00 15.06 O
TER
ATOM 1 O3' A B 876 -49.405 41.826 -29.574 1.00 2.24 O
ATOM 2 P C B 877 -50.143 40.619 -30.299 1.00 5.76 P
ATOM 3 OP1 C B 877 -49.329 40.290 -31.485 1.00 5.76 O
ATOM 4 OP2 C B 877 -51.574 41.015 -30.488 1.00 5.76 O
ATOM 5 O5' C B 877 -50.064 39.444 -29.226 1.00 5.76 O
ATOM 6 C5' C B 877 -48.956 39.312 -28.368 1.00 5.76 C
ATOM 7 C4' C B 877 -49.326 38.598 -27.094 1.00 5.76 C
ATOM 8 O4' C B 877 -49.879 39.533 -26.124 1.00 5.76 O
ATOM 9 C3' C B 877 -50.423 37.567 -27.182 1.00 5.76 C
ATOM 10 O3' C B 877 -50.053 36.379 -27.828 1.00 5.76 O
ATOM 11 C2' C B 877 -50.758 37.392 -25.715 1.00 5.76 C
ATOM 12 O2' C B 877 -49.683 36.790 -25.016 1.00 5.76 O
ATOM 13 C1' C B 877 -50.827 38.845 -25.307 1.00 5.76 C
ATOM 14 N1 C B 877 -52.183 39.367 -25.567 1.00 5.44 N
ATOM 15 C2 C B 877 -53.086 39.305 -24.523 1.00 5.44 C
ATOM 16 O2 C B 877 -52.647 38.905 -23.449 1.00 5.44 O
ATOM 17 N3 C B 877 -54.356 39.708 -24.712 1.00 5.44 N
ATOM 18 C4 C B 877 -54.739 40.118 -25.936 1.00 5.44 C
ATOM 19 N4 C B 877 -56.011 40.515 -26.156 1.00 5.44 N
ATOM 20 C5 C B 877 -53.836 40.144 -27.042 1.00 5.44 C
ATOM 21 C6 C B 877 -52.582 39.739 -26.821 1.00 5.44 C
ATOM 22 P C B 878 -51.195 35.344 -28.282 1.00 5.19 P
ATOM 23 OP1 C B 878 -50.498 34.217 -28.980 1.00 5.19 O
ATOM 24 OP2 C B 878 -52.253 36.121 -29.024 1.00 5.19 O
ATOM 25 O5' C B 878 -51.776 34.850 -26.894 1.00 5.19 O
TER
ATOM 2 P G A 583 -42.300 34.363 -32.460 1.00 14.78 P
ATOM 3 OP1 G A 583 -42.059 34.224 -33.935 1.00 14.78 O
ATOM 4 OP2 G A 583 -41.152 34.715 -31.559 1.00 14.78 O
ATOM 5 O5' G A 583 -43.527 35.359 -32.196 1.00 14.78 O
ATOM 6 C5' G A 583 -44.857 34.983 -32.540 1.00 14.78 C
ATOM 7 C4' G A 583 -45.844 35.987 -32.052 1.00 14.78 C
ATOM 8 O4' G A 583 -46.147 35.725 -30.672 1.00 14.78 O
ATOM 9 C3' G A 583 -45.353 37.416 -32.059 1.00 14.78 C
ATOM 10 O3' G A 583 -45.485 38.026 -33.326 1.00 14.78 O
ATOM 11 C2' G A 583 -46.182 38.066 -30.965 1.00 14.78 C
ATOM 12 O2' G A 583 -47.489 38.365 -31.414 1.00 14.78 O
ATOM 13 C1' G A 583 -46.271 36.939 -29.962 1.00 14.78 C
ATOM 14 N9 G A 583 -45.184 37.014 -28.985 1.00 15.09 N
ATOM 15 C8 G A 583 -44.004 36.331 -29.087 1.00 15.09 C
ATOM 16 N7 G A 583 -43.208 36.590 -28.081 1.00 15.09 N
ATOM 17 C5 G A 583 -43.904 37.490 -27.282 1.00 15.09 C
ATOM 18 C6 G A 583 -43.516 38.099 -26.062 1.00 15.09 C
ATOM 19 O6 G A 583 -42.447 37.946 -25.445 1.00 15.09 O
ATOM 20 N1 G A 583 -44.534 38.934 -25.595 1.00 15.09 N
ATOM 21 C2 G A 583 -45.742 39.137 -26.231 1.00 15.09 C
ATOM 22 N2 G A 583 -46.591 39.981 -25.632 1.00 15.09 N
ATOM 23 N3 G A 583 -46.103 38.569 -27.361 1.00 15.09 N
ATOM 24 C4 G A 583 -45.137 37.765 -27.830 1.00 15.09 C
ATOM 25 P C A 584 -44.609 39.310 -33.702 1.00 15.06 P
ATOM 26 OP1 C A 584 -45.137 39.823 -34.996 1.00 15.06 O
ATOM 27 OP2 C A 584 -43.177 38.903 -33.614 1.00 15.06 O
ATOM 28 O5' C A 584 -44.958 40.324 -32.536 1.00 15.06 O
TER
ATOM 1 O3' A B 876 -49.405 41.826 -29.574 1.00 2.24 O
ATOM 2 P C B 877 -50.143 40.619 -30.299 1.00 5.76 P
ATOM 3 OP1 C B 877 -49.329 40.290 -31.485 1.00 5.76 O
ATOM 4 OP2 C B 877 -51.574 41.015 -30.488 1.00 5.76 O
ATOM 5 O5' C B 877 -50.064 39.444 -29.226 1.00 5.76 O
ATOM 6 C5' C B 877 -48.956 39.312 -28.368 1.00 5.76 C
ATOM 7 C4' C B 877 -49.326 38.598 -27.094 1.00 5.76 C
ATOM 8 O4' C B 877 -49.879 39.533 -26.124 1.00 5.76 O
ATOM 9 C3' C B 877 -50.423 37.567 -27.182 1.00 5.76 C
ATOM 10 O3' C B 877 -50.053 36.379 -27.828 1.00 5.76 O
ATOM 11 C2' C B 877 -50.758 37.392 -25.715 1.00 5.76 C
ATOM 12 O2' C B 877 -49.683 36.790 -25.016 1.00 5.76 O
ATOM 13 C1' C B 877 -50.827 38.845 -25.307 1.00 5.76 C
ATOM 14 N1 C B 877 -52.183 39.367 -25.567 1.00 5.44 N
ATOM 15 C2 C B 877 -53.086 39.305 -24.523 1.00 5.44 C
ATOM 16 O2 C B 877 -52.647 38.905 -23.449 1.00 5.44 O
ATOM 17 N3 C B 877 -54.356 39.708 -24.712 1.00 5.44 N
ATOM 18 C4 C B 877 -54.739 40.118 -25.936 1.00 5.44 C
ATOM 19 N4 C B 877 -56.011 40.515 -26.156 1.00 5.44 N
ATOM 20 C5 C B 877 -53.836 40.144 -27.042 1.00 5.44 C
ATOM 21 C6 C B 877 -52.582 39.739 -26.821 1.00 5.44 C
ATOM 22 P C B 878 -51.195 35.344 -28.282 1.00 5.19 P
ATOM 23 OP1 C B 878 -50.498 34.217 -28.980 1.00 5.19 O
ATOM 24 OP2 C B 878 -52.253 36.121 -29.024 1.00 5.19 O
ATOM 25 O5' C B 878 -51.776 34.850 -26.894 1.00 5.19 O
TER
Atoms:
OP1: (-42.059,34.224,-33.935)
OP2: (-41.152,34.715,-31.559)
C3': (-45.353,37.416,-32.059)
C1': (-46.271,36.939,-29.962)
C5': (-44.857,34.983,-32.540)
O6: (-42.447,37.946,-25.445)
O4': (-46.147,35.725,-30.672)
C8: (-44.004,36.331,-29.087)
C2: (-45.742,39.137,-26.231)
C6: (-43.516,38.099,-26.062)
C5: (-43.904,37.490,-27.282)
C4: (-45.137,37.765,-27.830)
P: (-42.300,34.363,-32.460)
C4': (-45.844,35.987,-32.052)
C2': (-46.182,38.066,-30.965)
O2': (-47.489,38.365,-31.414)
N1: (-44.534,38.934,-25.595)
N2: (-46.591,39.981,-25.632)
N3: (-46.103,38.569,-27.361)
N7: (-43.208,36.590,-28.081)
N9: (-45.184,37.014,-28.985)
O5': (-43.527,35.359,-32.196)
O3': (-45.485,38.026,-33.326)
OP2: (-41.152,34.715,-31.559)
C3': (-45.353,37.416,-32.059)
C1': (-46.271,36.939,-29.962)
C5': (-44.857,34.983,-32.540)
O6: (-42.447,37.946,-25.445)
O4': (-46.147,35.725,-30.672)
C8: (-44.004,36.331,-29.087)
C2: (-45.742,39.137,-26.231)
C6: (-43.516,38.099,-26.062)
C5: (-43.904,37.490,-27.282)
C4: (-45.137,37.765,-27.830)
P: (-42.300,34.363,-32.460)
C4': (-45.844,35.987,-32.052)
C2': (-46.182,38.066,-30.965)
O2': (-47.489,38.365,-31.414)
N1: (-44.534,38.934,-25.595)
N2: (-46.591,39.981,-25.632)
N3: (-46.103,38.569,-27.361)
N7: (-43.208,36.590,-28.081)
N9: (-45.184,37.014,-28.985)
O5': (-43.527,35.359,-32.196)
O3': (-45.485,38.026,-33.326)
C2: (-53.086,39.305,-24.523)
OP1: (-49.329,40.290,-31.485)
OP2: (-51.574,41.015,-30.488)
C4: (-54.739,40.118,-25.936)
O5': (-50.064,39.444,-29.226)
C3': (-50.423,37.567,-27.182)
C1': (-50.827,38.845,-25.307)
O4': (-49.879,39.533,-26.124)
C5': (-48.956,39.312,-28.368)
P: (-50.143,40.619,-30.299)
O2: (-52.647,38.905,-23.449)
C4': (-49.326,38.598,-27.094)
C2': (-50.758,37.392,-25.715)
O2': (-49.683,36.790,-25.016)
N1: (-52.183,39.367,-25.567)
N3: (-54.356,39.708,-24.712)
N4: (-56.011,40.515,-26.156)
C6: (-52.582,39.739,-26.821)
C5: (-53.836,40.144,-27.042)
O3': (-50.053,36.379,-27.828)
OP1: (-49.329,40.290,-31.485)
OP2: (-51.574,41.015,-30.488)
C4: (-54.739,40.118,-25.936)
O5': (-50.064,39.444,-29.226)
C3': (-50.423,37.567,-27.182)
C1': (-50.827,38.845,-25.307)
O4': (-49.879,39.533,-26.124)
C5': (-48.956,39.312,-28.368)
P: (-50.143,40.619,-30.299)
O2: (-52.647,38.905,-23.449)
C4': (-49.326,38.598,-27.094)
C2': (-50.758,37.392,-25.715)
O2': (-49.683,36.790,-25.016)
N1: (-52.183,39.367,-25.567)
N3: (-54.356,39.708,-24.712)
N4: (-56.011,40.515,-26.156)
C6: (-52.582,39.739,-26.821)
C5: (-53.836,40.144,-27.042)
O3': (-50.053,36.379,-27.828)
Image (generated by PyMOL):