Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A120:A288
Extra
PDB:
ATOM 1 O3' U A 119 -0.563 58.234 108.219 1.00107.64 O
ATOM 2 P G A 120 -0.879 56.912 107.368 1.00 31.24 P
ATOM 3 OP1 G A 120 -0.413 55.749 108.181 1.00 31.24 O
ATOM 4 OP2 G A 120 -0.312 57.120 106.007 1.00 31.24 O
ATOM 5 O5' G A 120 -2.471 56.912 107.290 1.00 31.24 O
ATOM 6 C5' G A 120 -3.233 55.820 107.774 1.00 31.24 C
ATOM 7 C4' G A 120 -4.551 55.735 107.067 1.00 31.24 C
ATOM 8 O4' G A 120 -5.109 57.066 106.932 1.00 31.24 O
ATOM 9 C3' G A 120 -4.496 55.231 105.644 1.00 31.24 C
ATOM 10 O3' G A 120 -4.408 53.825 105.550 1.00 31.24 O
ATOM 11 C2' G A 120 -5.762 55.818 105.050 1.00 31.24 C
ATOM 12 O2' G A 120 -6.915 55.131 105.515 1.00 31.24 O
ATOM 13 C1' G A 120 -5.738 57.198 105.677 1.00 31.24 C
ATOM 14 N9 G A 120 -4.959 58.148 104.854 1.00 30.94 N
ATOM 15 C8 G A 120 -3.706 58.664 105.077 1.00 30.94 C
ATOM 16 N7 G A 120 -3.293 59.469 104.138 1.00 30.94 N
ATOM 17 C5 G A 120 -4.335 59.487 103.230 1.00 30.94 C
ATOM 18 C6 G A 120 -4.475 60.177 101.999 1.00 30.94 C
ATOM 19 O6 G A 120 -3.675 60.950 101.434 1.00 30.94 O
ATOM 20 N1 G A 120 -5.711 59.898 101.408 1.00 30.94 N
ATOM 21 C2 G A 120 -6.679 59.074 101.922 1.00 30.94 C
ATOM 22 N2 G A 120 -7.797 58.934 101.195 1.00 30.94 N
ATOM 23 N3 G A 120 -6.550 58.431 103.058 1.00 30.94 N
ATOM 24 C4 G A 120 -5.365 58.680 103.653 1.00 30.94 C
ATOM 25 P U A 121 -3.357 53.157 104.536 1.00 9.31 P
ATOM 26 OP1 U A 121 -3.133 51.755 104.996 1.00 9.31 O
ATOM 27 OP2 U A 121 -2.182 54.082 104.445 1.00 9.31 O
ATOM 28 O5' U A 121 -4.147 53.171 103.158 1.00 9.31 O
TER
ATOM 1 O3' G B 287 -14.421 58.557 102.537 1.00 14.43 O
ATOM 2 P C B 288 -14.637 58.149 100.998 1.00 10.55 P
ATOM 3 OP1 C B 288 -14.920 59.399 100.255 1.00 10.55 O
ATOM 4 OP2 C B 288 -15.654 57.063 100.975 1.00 10.55 O
ATOM 5 O5' C B 288 -13.207 57.562 100.562 1.00 10.55 O
ATOM 6 C5' C B 288 -12.039 58.373 100.581 1.00 10.55 C
ATOM 7 C4' C B 288 -10.830 57.656 99.997 1.00 10.55 C
ATOM 8 O4' C B 288 -10.288 56.699 100.956 1.00 10.55 O
ATOM 9 C3' C B 288 -11.057 56.820 98.734 1.00 10.55 C
ATOM 10 O3' C B 288 -11.074 57.597 97.553 1.00 10.55 O
ATOM 11 C2' C B 288 -9.888 55.865 98.783 1.00 10.55 C
ATOM 12 O2' C B 288 -8.701 56.537 98.406 1.00 10.55 O
ATOM 13 C1' C B 288 -9.820 55.555 100.273 1.00 10.55 C
ATOM 14 N1 C B 288 -10.695 54.422 100.624 1.00 10.51 N
ATOM 15 C2 C B 288 -10.216 53.107 100.662 1.00 10.51 C
ATOM 16 O2 C B 288 -9.030 52.875 100.406 1.00 10.51 O
ATOM 17 N3 C B 288 -11.053 52.100 100.978 1.00 10.51 N
ATOM 18 C4 C B 288 -12.322 52.379 101.232 1.00 10.51 C
ATOM 19 N4 C B 288 -13.124 51.370 101.544 1.00 10.51 N
ATOM 20 C5 C B 288 -12.839 53.704 101.193 1.00 10.51 C
ATOM 21 C6 C B 288 -12.004 54.686 100.883 1.00 10.51 C
ATOM 22 P U B 289 -11.862 57.091 96.251 1.00 19.39 P
ATOM 23 OP1 U B 289 -11.614 58.089 95.182 1.00 19.39 O
ATOM 24 OP2 U B 289 -13.275 56.818 96.656 1.00 19.39 O
ATOM 25 O5' U B 289 -11.114 55.726 95.914 1.00 19.39 O
TER
ATOM 2 P G A 120 -0.879 56.912 107.368 1.00 31.24 P
ATOM 3 OP1 G A 120 -0.413 55.749 108.181 1.00 31.24 O
ATOM 4 OP2 G A 120 -0.312 57.120 106.007 1.00 31.24 O
ATOM 5 O5' G A 120 -2.471 56.912 107.290 1.00 31.24 O
ATOM 6 C5' G A 120 -3.233 55.820 107.774 1.00 31.24 C
ATOM 7 C4' G A 120 -4.551 55.735 107.067 1.00 31.24 C
ATOM 8 O4' G A 120 -5.109 57.066 106.932 1.00 31.24 O
ATOM 9 C3' G A 120 -4.496 55.231 105.644 1.00 31.24 C
ATOM 10 O3' G A 120 -4.408 53.825 105.550 1.00 31.24 O
ATOM 11 C2' G A 120 -5.762 55.818 105.050 1.00 31.24 C
ATOM 12 O2' G A 120 -6.915 55.131 105.515 1.00 31.24 O
ATOM 13 C1' G A 120 -5.738 57.198 105.677 1.00 31.24 C
ATOM 14 N9 G A 120 -4.959 58.148 104.854 1.00 30.94 N
ATOM 15 C8 G A 120 -3.706 58.664 105.077 1.00 30.94 C
ATOM 16 N7 G A 120 -3.293 59.469 104.138 1.00 30.94 N
ATOM 17 C5 G A 120 -4.335 59.487 103.230 1.00 30.94 C
ATOM 18 C6 G A 120 -4.475 60.177 101.999 1.00 30.94 C
ATOM 19 O6 G A 120 -3.675 60.950 101.434 1.00 30.94 O
ATOM 20 N1 G A 120 -5.711 59.898 101.408 1.00 30.94 N
ATOM 21 C2 G A 120 -6.679 59.074 101.922 1.00 30.94 C
ATOM 22 N2 G A 120 -7.797 58.934 101.195 1.00 30.94 N
ATOM 23 N3 G A 120 -6.550 58.431 103.058 1.00 30.94 N
ATOM 24 C4 G A 120 -5.365 58.680 103.653 1.00 30.94 C
ATOM 25 P U A 121 -3.357 53.157 104.536 1.00 9.31 P
ATOM 26 OP1 U A 121 -3.133 51.755 104.996 1.00 9.31 O
ATOM 27 OP2 U A 121 -2.182 54.082 104.445 1.00 9.31 O
ATOM 28 O5' U A 121 -4.147 53.171 103.158 1.00 9.31 O
TER
ATOM 1 O3' G B 287 -14.421 58.557 102.537 1.00 14.43 O
ATOM 2 P C B 288 -14.637 58.149 100.998 1.00 10.55 P
ATOM 3 OP1 C B 288 -14.920 59.399 100.255 1.00 10.55 O
ATOM 4 OP2 C B 288 -15.654 57.063 100.975 1.00 10.55 O
ATOM 5 O5' C B 288 -13.207 57.562 100.562 1.00 10.55 O
ATOM 6 C5' C B 288 -12.039 58.373 100.581 1.00 10.55 C
ATOM 7 C4' C B 288 -10.830 57.656 99.997 1.00 10.55 C
ATOM 8 O4' C B 288 -10.288 56.699 100.956 1.00 10.55 O
ATOM 9 C3' C B 288 -11.057 56.820 98.734 1.00 10.55 C
ATOM 10 O3' C B 288 -11.074 57.597 97.553 1.00 10.55 O
ATOM 11 C2' C B 288 -9.888 55.865 98.783 1.00 10.55 C
ATOM 12 O2' C B 288 -8.701 56.537 98.406 1.00 10.55 O
ATOM 13 C1' C B 288 -9.820 55.555 100.273 1.00 10.55 C
ATOM 14 N1 C B 288 -10.695 54.422 100.624 1.00 10.51 N
ATOM 15 C2 C B 288 -10.216 53.107 100.662 1.00 10.51 C
ATOM 16 O2 C B 288 -9.030 52.875 100.406 1.00 10.51 O
ATOM 17 N3 C B 288 -11.053 52.100 100.978 1.00 10.51 N
ATOM 18 C4 C B 288 -12.322 52.379 101.232 1.00 10.51 C
ATOM 19 N4 C B 288 -13.124 51.370 101.544 1.00 10.51 N
ATOM 20 C5 C B 288 -12.839 53.704 101.193 1.00 10.51 C
ATOM 21 C6 C B 288 -12.004 54.686 100.883 1.00 10.51 C
ATOM 22 P U B 289 -11.862 57.091 96.251 1.00 19.39 P
ATOM 23 OP1 U B 289 -11.614 58.089 95.182 1.00 19.39 O
ATOM 24 OP2 U B 289 -13.275 56.818 96.656 1.00 19.39 O
ATOM 25 O5' U B 289 -11.114 55.726 95.914 1.00 19.39 O
TER
Atoms:
OP1: (-0.413,55.749,108.181)
OP2: (-0.312,57.120,106.007)
C3': (-4.496,55.231,105.644)
C1': (-5.738,57.198,105.677)
C5': (-3.233,55.820,107.774)
O6: (-3.675,60.950,101.434)
O4': (-5.109,57.066,106.932)
C8: (-3.706,58.664,105.077)
C2: (-6.679,59.074,101.922)
C6: (-4.475,60.177,101.999)
C5: (-4.335,59.487,103.230)
C4: (-5.365,58.680,103.653)
P: (-0.879,56.912,107.368)
C4': (-4.551,55.735,107.067)
C2': (-5.762,55.818,105.050)
O2': (-6.915,55.131,105.515)
N1: (-5.711,59.898,101.408)
N2: (-7.797,58.934,101.195)
N3: (-6.550,58.431,103.058)
N7: (-3.293,59.469,104.138)
N9: (-4.959,58.148,104.854)
O5': (-2.471,56.912,107.290)
O3': (-4.408,53.825,105.550)
OP2: (-0.312,57.120,106.007)
C3': (-4.496,55.231,105.644)
C1': (-5.738,57.198,105.677)
C5': (-3.233,55.820,107.774)
O6: (-3.675,60.950,101.434)
O4': (-5.109,57.066,106.932)
C8: (-3.706,58.664,105.077)
C2: (-6.679,59.074,101.922)
C6: (-4.475,60.177,101.999)
C5: (-4.335,59.487,103.230)
C4: (-5.365,58.680,103.653)
P: (-0.879,56.912,107.368)
C4': (-4.551,55.735,107.067)
C2': (-5.762,55.818,105.050)
O2': (-6.915,55.131,105.515)
N1: (-5.711,59.898,101.408)
N2: (-7.797,58.934,101.195)
N3: (-6.550,58.431,103.058)
N7: (-3.293,59.469,104.138)
N9: (-4.959,58.148,104.854)
O5': (-2.471,56.912,107.290)
O3': (-4.408,53.825,105.550)
C2: (-10.216,53.107,100.662)
OP1: (-14.920,59.399,100.255)
OP2: (-15.654,57.063,100.975)
C4: (-12.322,52.379,101.232)
O5': (-13.207,57.562,100.562)
C3': (-11.057,56.820,98.734)
C1': (-9.820,55.555,100.273)
O4': (-10.288,56.699,100.956)
C5': (-12.039,58.373,100.581)
P: (-14.637,58.149,100.998)
O2: (-9.030,52.875,100.406)
C4': (-10.830,57.656,99.997)
C2': (-9.888,55.865,98.783)
O2': (-8.701,56.537,98.406)
N1: (-10.695,54.422,100.624)
N3: (-11.053,52.100,100.978)
N4: (-13.124,51.370,101.544)
C6: (-12.004,54.686,100.883)
C5: (-12.839,53.704,101.193)
O3': (-11.074,57.597,97.553)
OP1: (-14.920,59.399,100.255)
OP2: (-15.654,57.063,100.975)
C4: (-12.322,52.379,101.232)
O5': (-13.207,57.562,100.562)
C3': (-11.057,56.820,98.734)
C1': (-9.820,55.555,100.273)
O4': (-10.288,56.699,100.956)
C5': (-12.039,58.373,100.581)
P: (-14.637,58.149,100.998)
O2: (-9.030,52.875,100.406)
C4': (-10.830,57.656,99.997)
C2': (-9.888,55.865,98.783)
O2': (-8.701,56.537,98.406)
N1: (-10.695,54.422,100.624)
N3: (-11.053,52.100,100.978)
N4: (-13.124,51.370,101.544)
C6: (-12.004,54.686,100.883)
C5: (-12.839,53.704,101.193)
O3': (-11.074,57.597,97.553)
Image (generated by PyMOL):