Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A9:A523
Extra
PDB:
ATOM 1 O3' A A 8 -41.196 70.477 69.212 1.00 9.44 O
ATOM 2 P G A 9 -41.383 72.058 69.054 1.00 16.29 P
ATOM 3 OP1 G A 9 -42.341 72.279 67.934 1.00 16.29 O
ATOM 4 OP2 G A 9 -40.011 72.642 68.968 1.00 16.29 O
ATOM 5 O5' G A 9 -42.068 72.475 70.430 1.00 16.29 O
ATOM 6 C5' G A 9 -43.348 71.972 70.781 1.00 16.29 C
ATOM 7 C4' G A 9 -43.622 72.139 72.251 1.00 16.29 C
ATOM 8 O4' G A 9 -42.578 71.498 73.024 1.00 16.29 O
ATOM 9 C3' G A 9 -43.628 73.562 72.762 1.00 16.29 C
ATOM 10 O3' G A 9 -44.839 74.220 72.501 1.00 16.29 O
ATOM 11 C2' G A 9 -43.334 73.389 74.240 1.00 16.29 C
ATOM 12 O2' G A 9 -44.498 72.992 74.944 1.00 16.29 O
ATOM 13 C1' G A 9 -42.357 72.219 74.214 1.00 16.29 C
ATOM 14 N9 G A 9 -40.961 72.665 74.230 1.00 16.14 N
ATOM 15 C8 G A 9 -40.002 72.484 73.272 1.00 16.14 C
ATOM 16 N7 G A 9 -38.853 72.994 73.627 1.00 16.14 N
ATOM 17 C5 G A 9 -39.076 73.528 74.891 1.00 16.14 C
ATOM 18 C6 G A 9 -38.205 74.203 75.786 1.00 16.14 C
ATOM 19 O6 G A 9 -37.012 74.494 75.641 1.00 16.14 O
ATOM 20 N1 G A 9 -38.858 74.561 76.955 1.00 16.14 N
ATOM 21 C2 G A 9 -40.183 74.302 77.214 1.00 16.14 C
ATOM 22 N2 G A 9 -40.643 74.711 78.398 1.00 16.14 N
ATOM 23 N3 G A 9 -41.016 73.679 76.398 1.00 16.14 N
ATOM 24 C4 G A 9 -40.380 73.324 75.269 1.00 16.14 C
ATOM 25 P U A 10 -44.837 75.583 71.652 1.00 7.49 P
ATOM 26 OP1 U A 10 -46.176 75.678 70.984 1.00 7.49 O
ATOM 27 OP2 U A 10 -43.593 75.579 70.801 1.00 7.49 O
ATOM 28 O5' U A 10 -44.723 76.694 72.783 1.00 7.49 O
TER
ATOM 1 O3' G B 522 -44.266 70.918 85.636 1.00 18.17 O
ATOM 2 P C B 523 -45.188 72.204 85.920 1.00 10.33 P
ATOM 3 OP1 C B 523 -44.547 72.944 87.044 1.00 10.33 O
ATOM 4 OP2 C B 523 -46.589 71.732 86.079 1.00 10.33 O
ATOM 5 O5' C B 523 -45.053 73.034 84.569 1.00 10.33 O
ATOM 6 C5' C B 523 -43.816 73.636 84.211 1.00 10.33 C
ATOM 7 C4' C B 523 -43.626 73.690 82.723 1.00 10.33 C
ATOM 8 O4' C B 523 -43.712 72.352 82.164 1.00 10.33 O
ATOM 9 C3' C B 523 -44.661 74.468 81.956 1.00 10.33 C
ATOM 10 O3' C B 523 -44.424 75.866 81.997 1.00 10.33 O
ATOM 11 C2' C B 523 -44.571 73.850 80.556 1.00 10.33 C
ATOM 12 O2' C B 523 -43.441 74.338 79.853 1.00 10.33 O
ATOM 13 C1' C B 523 -44.306 72.395 80.884 1.00 10.33 C
ATOM 14 N1 C B 523 -45.534 71.582 80.910 1.00 10.52 N
ATOM 15 C2 C B 523 -46.111 71.151 79.722 1.00 10.52 C
ATOM 16 O2 C B 523 -45.593 71.524 78.658 1.00 10.52 O
ATOM 17 N3 C B 523 -47.220 70.368 79.765 1.00 10.52 N
ATOM 18 C4 C B 523 -47.735 70.013 80.935 1.00 10.52 C
ATOM 19 N4 C B 523 -48.819 69.255 80.952 1.00 10.52 N
ATOM 20 C5 C B 523 -47.166 70.414 82.160 1.00 10.52 C
ATOM 21 C6 C B 523 -46.074 71.183 82.102 1.00 10.52 C
ATOM 22 P C B 524 -45.629 76.886 82.356 1.00 18.06 P
ATOM 23 OP1 C B 524 -45.018 78.063 83.026 1.00 18.06 O
ATOM 24 OP2 C B 524 -46.663 76.111 83.089 1.00 18.06 O
ATOM 25 O5' C B 524 -46.193 77.297 80.918 1.00 18.06 O
TER
ATOM 2 P G A 9 -41.383 72.058 69.054 1.00 16.29 P
ATOM 3 OP1 G A 9 -42.341 72.279 67.934 1.00 16.29 O
ATOM 4 OP2 G A 9 -40.011 72.642 68.968 1.00 16.29 O
ATOM 5 O5' G A 9 -42.068 72.475 70.430 1.00 16.29 O
ATOM 6 C5' G A 9 -43.348 71.972 70.781 1.00 16.29 C
ATOM 7 C4' G A 9 -43.622 72.139 72.251 1.00 16.29 C
ATOM 8 O4' G A 9 -42.578 71.498 73.024 1.00 16.29 O
ATOM 9 C3' G A 9 -43.628 73.562 72.762 1.00 16.29 C
ATOM 10 O3' G A 9 -44.839 74.220 72.501 1.00 16.29 O
ATOM 11 C2' G A 9 -43.334 73.389 74.240 1.00 16.29 C
ATOM 12 O2' G A 9 -44.498 72.992 74.944 1.00 16.29 O
ATOM 13 C1' G A 9 -42.357 72.219 74.214 1.00 16.29 C
ATOM 14 N9 G A 9 -40.961 72.665 74.230 1.00 16.14 N
ATOM 15 C8 G A 9 -40.002 72.484 73.272 1.00 16.14 C
ATOM 16 N7 G A 9 -38.853 72.994 73.627 1.00 16.14 N
ATOM 17 C5 G A 9 -39.076 73.528 74.891 1.00 16.14 C
ATOM 18 C6 G A 9 -38.205 74.203 75.786 1.00 16.14 C
ATOM 19 O6 G A 9 -37.012 74.494 75.641 1.00 16.14 O
ATOM 20 N1 G A 9 -38.858 74.561 76.955 1.00 16.14 N
ATOM 21 C2 G A 9 -40.183 74.302 77.214 1.00 16.14 C
ATOM 22 N2 G A 9 -40.643 74.711 78.398 1.00 16.14 N
ATOM 23 N3 G A 9 -41.016 73.679 76.398 1.00 16.14 N
ATOM 24 C4 G A 9 -40.380 73.324 75.269 1.00 16.14 C
ATOM 25 P U A 10 -44.837 75.583 71.652 1.00 7.49 P
ATOM 26 OP1 U A 10 -46.176 75.678 70.984 1.00 7.49 O
ATOM 27 OP2 U A 10 -43.593 75.579 70.801 1.00 7.49 O
ATOM 28 O5' U A 10 -44.723 76.694 72.783 1.00 7.49 O
TER
ATOM 1 O3' G B 522 -44.266 70.918 85.636 1.00 18.17 O
ATOM 2 P C B 523 -45.188 72.204 85.920 1.00 10.33 P
ATOM 3 OP1 C B 523 -44.547 72.944 87.044 1.00 10.33 O
ATOM 4 OP2 C B 523 -46.589 71.732 86.079 1.00 10.33 O
ATOM 5 O5' C B 523 -45.053 73.034 84.569 1.00 10.33 O
ATOM 6 C5' C B 523 -43.816 73.636 84.211 1.00 10.33 C
ATOM 7 C4' C B 523 -43.626 73.690 82.723 1.00 10.33 C
ATOM 8 O4' C B 523 -43.712 72.352 82.164 1.00 10.33 O
ATOM 9 C3' C B 523 -44.661 74.468 81.956 1.00 10.33 C
ATOM 10 O3' C B 523 -44.424 75.866 81.997 1.00 10.33 O
ATOM 11 C2' C B 523 -44.571 73.850 80.556 1.00 10.33 C
ATOM 12 O2' C B 523 -43.441 74.338 79.853 1.00 10.33 O
ATOM 13 C1' C B 523 -44.306 72.395 80.884 1.00 10.33 C
ATOM 14 N1 C B 523 -45.534 71.582 80.910 1.00 10.52 N
ATOM 15 C2 C B 523 -46.111 71.151 79.722 1.00 10.52 C
ATOM 16 O2 C B 523 -45.593 71.524 78.658 1.00 10.52 O
ATOM 17 N3 C B 523 -47.220 70.368 79.765 1.00 10.52 N
ATOM 18 C4 C B 523 -47.735 70.013 80.935 1.00 10.52 C
ATOM 19 N4 C B 523 -48.819 69.255 80.952 1.00 10.52 N
ATOM 20 C5 C B 523 -47.166 70.414 82.160 1.00 10.52 C
ATOM 21 C6 C B 523 -46.074 71.183 82.102 1.00 10.52 C
ATOM 22 P C B 524 -45.629 76.886 82.356 1.00 18.06 P
ATOM 23 OP1 C B 524 -45.018 78.063 83.026 1.00 18.06 O
ATOM 24 OP2 C B 524 -46.663 76.111 83.089 1.00 18.06 O
ATOM 25 O5' C B 524 -46.193 77.297 80.918 1.00 18.06 O
TER
Atoms:
OP1: (-42.341,72.279,67.934)
OP2: (-40.011,72.642,68.968)
C3': (-43.628,73.562,72.762)
C1': (-42.357,72.219,74.214)
C5': (-43.348,71.972,70.781)
O6: (-37.012,74.494,75.641)
O4': (-42.578,71.498,73.024)
C8: (-40.002,72.484,73.272)
C2: (-40.183,74.302,77.214)
C6: (-38.205,74.203,75.786)
C5: (-39.076,73.528,74.891)
C4: (-40.380,73.324,75.269)
P: (-41.383,72.058,69.054)
C4': (-43.622,72.139,72.251)
C2': (-43.334,73.389,74.240)
O2': (-44.498,72.992,74.944)
N1: (-38.858,74.561,76.955)
N2: (-40.643,74.711,78.398)
N3: (-41.016,73.679,76.398)
N7: (-38.853,72.994,73.627)
N9: (-40.961,72.665,74.230)
O5': (-42.068,72.475,70.430)
O3': (-44.839,74.220,72.501)
OP2: (-40.011,72.642,68.968)
C3': (-43.628,73.562,72.762)
C1': (-42.357,72.219,74.214)
C5': (-43.348,71.972,70.781)
O6: (-37.012,74.494,75.641)
O4': (-42.578,71.498,73.024)
C8: (-40.002,72.484,73.272)
C2: (-40.183,74.302,77.214)
C6: (-38.205,74.203,75.786)
C5: (-39.076,73.528,74.891)
C4: (-40.380,73.324,75.269)
P: (-41.383,72.058,69.054)
C4': (-43.622,72.139,72.251)
C2': (-43.334,73.389,74.240)
O2': (-44.498,72.992,74.944)
N1: (-38.858,74.561,76.955)
N2: (-40.643,74.711,78.398)
N3: (-41.016,73.679,76.398)
N7: (-38.853,72.994,73.627)
N9: (-40.961,72.665,74.230)
O5': (-42.068,72.475,70.430)
O3': (-44.839,74.220,72.501)
C2: (-46.111,71.151,79.722)
OP1: (-44.547,72.944,87.044)
OP2: (-46.589,71.732,86.079)
C4: (-47.735,70.013,80.935)
O5': (-45.053,73.034,84.569)
C3': (-44.661,74.468,81.956)
C1': (-44.306,72.395,80.884)
O4': (-43.712,72.352,82.164)
C5': (-43.816,73.636,84.211)
P: (-45.188,72.204,85.920)
O2: (-45.593,71.524,78.658)
C4': (-43.626,73.690,82.723)
C2': (-44.571,73.850,80.556)
O2': (-43.441,74.338,79.853)
N1: (-45.534,71.582,80.910)
N3: (-47.220,70.368,79.765)
N4: (-48.819,69.255,80.952)
C6: (-46.074,71.183,82.102)
C5: (-47.166,70.414,82.160)
O3': (-44.424,75.866,81.997)
OP1: (-44.547,72.944,87.044)
OP2: (-46.589,71.732,86.079)
C4: (-47.735,70.013,80.935)
O5': (-45.053,73.034,84.569)
C3': (-44.661,74.468,81.956)
C1': (-44.306,72.395,80.884)
O4': (-43.712,72.352,82.164)
C5': (-43.816,73.636,84.211)
P: (-45.188,72.204,85.920)
O2: (-45.593,71.524,78.658)
C4': (-43.626,73.690,82.723)
C2': (-44.571,73.850,80.556)
O2': (-43.441,74.338,79.853)
N1: (-45.534,71.582,80.910)
N3: (-47.220,70.368,79.765)
N4: (-48.819,69.255,80.952)
C6: (-46.074,71.183,82.102)
C5: (-47.166,70.414,82.160)
O3': (-44.424,75.866,81.997)
Image (generated by PyMOL):