Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1976:A1949
Extra
PDB:
ATOM 1 O3' G A1975 -28.299 108.787 142.078 1.00 8.76 O
ATOM 2 P G A1976 -28.198 107.245 142.520 1.00 11.62 P
ATOM 3 OP1 G A1976 -28.911 107.108 143.815 1.00 11.62 O
ATOM 4 OP2 G A1976 -26.755 106.860 142.445 1.00 11.62 O
ATOM 5 O5' G A1976 -29.019 106.509 141.379 1.00 11.62 O
ATOM 6 C5' G A1976 -30.357 106.890 141.093 1.00 11.62 C
ATOM 7 C4' G A1976 -30.944 106.075 139.962 1.00 11.62 C
ATOM 8 O4' G A1976 -30.319 106.452 138.698 1.00 11.62 O
ATOM 9 C3' G A1976 -30.726 104.569 140.032 1.00 11.62 C
ATOM 10 O3' G A1976 -31.598 103.916 140.924 1.00 11.62 O
ATOM 11 C2' G A1976 -30.923 104.164 138.591 1.00 11.62 C
ATOM 12 O2' G A1976 -32.297 104.219 138.254 1.00 11.62 O
ATOM 13 C1' G A1976 -30.202 105.307 137.877 1.00 11.62 C
ATOM 14 N9 G A1976 -28.775 105.010 137.685 1.00 11.46 N
ATOM 15 C8 G A1976 -27.657 105.563 138.250 1.00 11.46 C
ATOM 16 N7 G A1976 -26.543 105.024 137.835 1.00 11.46 N
ATOM 17 C5 G A1976 -26.972 104.056 136.952 1.00 11.46 C
ATOM 18 C6 G A1976 -26.248 103.129 136.183 1.00 11.46 C
ATOM 19 O6 G A1976 -25.031 102.973 136.119 1.00 11.46 O
ATOM 20 N1 G A1976 -27.091 102.328 135.439 1.00 11.46 N
ATOM 21 C2 G A1976 -28.455 102.415 135.430 1.00 11.46 C
ATOM 22 N2 G A1976 -29.100 101.554 134.632 1.00 11.46 N
ATOM 23 N3 G A1976 -29.154 103.267 136.141 1.00 11.46 N
ATOM 24 C4 G A1976 -28.340 104.038 136.862 1.00 11.46 C
ATOM 25 P C A1977 -31.144 102.539 141.622 1.00 0.01 P
ATOM 26 OP1 C A1977 -32.301 102.061 142.446 1.00 0.01 O
ATOM 27 OP2 C A1977 -29.843 102.793 142.283 1.00 0.01 O
ATOM 28 O5' C A1977 -30.925 101.573 140.381 1.00 0.01 O
TER
ATOM 1 O3' U B1948 -36.159 104.252 137.213 1.00 0.92 O
ATOM 2 P C B1949 -36.149 104.405 135.613 1.00 0.01 P
ATOM 3 OP1 C B1949 -35.622 105.759 135.289 1.00 0.01 O
ATOM 4 OP2 C B1949 -37.493 104.024 135.141 1.00 0.01 O
ATOM 5 O5' C B1949 -35.119 103.313 135.157 1.00 0.01 O
ATOM 6 C5' C B1949 -33.776 103.393 135.540 1.00 0.01 C
ATOM 7 C4' C B1949 -33.107 102.089 135.305 1.00 0.01 C
ATOM 8 O4' C B1949 -33.838 101.057 135.994 1.00 0.01 O
ATOM 9 C3' C B1949 -33.097 101.611 133.873 1.00 0.01 C
ATOM 10 O3' C B1949 -32.098 102.228 133.102 1.00 0.01 O
ATOM 11 C2' C B1949 -32.900 100.119 134.041 1.00 0.01 C
ATOM 12 O2' C B1949 -31.548 99.829 134.360 1.00 0.01 O
ATOM 13 C1' C B1949 -33.747 99.852 135.274 1.00 0.01 C
ATOM 14 N1 C B1949 -35.098 99.411 134.948 1.00 0.07 N
ATOM 15 C2 C B1949 -35.260 98.144 134.436 1.00 0.07 C
ATOM 16 O2 C B1949 -34.234 97.520 134.253 1.00 0.07 O
ATOM 17 N3 C B1949 -36.485 97.654 134.146 1.00 0.07 N
ATOM 18 C4 C B1949 -37.550 98.444 134.383 1.00 0.07 C
ATOM 19 N4 C B1949 -38.783 97.988 134.101 1.00 0.07 N
ATOM 20 C5 C B1949 -37.403 99.770 134.929 1.00 0.07 C
ATOM 21 C6 C B1949 -36.164 100.206 135.205 1.00 0.07 C
ATOM 22 P C B1950 -32.495 103.201 131.886 1.00 0.98 P
ATOM 23 OP1 C B1950 -31.776 104.473 132.122 1.00 0.98 O
ATOM 24 OP2 C B1950 -33.982 103.223 131.766 1.00 0.98 O
ATOM 25 O5' C B1950 -31.876 102.439 130.648 1.00 0.98 O
TER
ATOM 2 P G A1976 -28.198 107.245 142.520 1.00 11.62 P
ATOM 3 OP1 G A1976 -28.911 107.108 143.815 1.00 11.62 O
ATOM 4 OP2 G A1976 -26.755 106.860 142.445 1.00 11.62 O
ATOM 5 O5' G A1976 -29.019 106.509 141.379 1.00 11.62 O
ATOM 6 C5' G A1976 -30.357 106.890 141.093 1.00 11.62 C
ATOM 7 C4' G A1976 -30.944 106.075 139.962 1.00 11.62 C
ATOM 8 O4' G A1976 -30.319 106.452 138.698 1.00 11.62 O
ATOM 9 C3' G A1976 -30.726 104.569 140.032 1.00 11.62 C
ATOM 10 O3' G A1976 -31.598 103.916 140.924 1.00 11.62 O
ATOM 11 C2' G A1976 -30.923 104.164 138.591 1.00 11.62 C
ATOM 12 O2' G A1976 -32.297 104.219 138.254 1.00 11.62 O
ATOM 13 C1' G A1976 -30.202 105.307 137.877 1.00 11.62 C
ATOM 14 N9 G A1976 -28.775 105.010 137.685 1.00 11.46 N
ATOM 15 C8 G A1976 -27.657 105.563 138.250 1.00 11.46 C
ATOM 16 N7 G A1976 -26.543 105.024 137.835 1.00 11.46 N
ATOM 17 C5 G A1976 -26.972 104.056 136.952 1.00 11.46 C
ATOM 18 C6 G A1976 -26.248 103.129 136.183 1.00 11.46 C
ATOM 19 O6 G A1976 -25.031 102.973 136.119 1.00 11.46 O
ATOM 20 N1 G A1976 -27.091 102.328 135.439 1.00 11.46 N
ATOM 21 C2 G A1976 -28.455 102.415 135.430 1.00 11.46 C
ATOM 22 N2 G A1976 -29.100 101.554 134.632 1.00 11.46 N
ATOM 23 N3 G A1976 -29.154 103.267 136.141 1.00 11.46 N
ATOM 24 C4 G A1976 -28.340 104.038 136.862 1.00 11.46 C
ATOM 25 P C A1977 -31.144 102.539 141.622 1.00 0.01 P
ATOM 26 OP1 C A1977 -32.301 102.061 142.446 1.00 0.01 O
ATOM 27 OP2 C A1977 -29.843 102.793 142.283 1.00 0.01 O
ATOM 28 O5' C A1977 -30.925 101.573 140.381 1.00 0.01 O
TER
ATOM 1 O3' U B1948 -36.159 104.252 137.213 1.00 0.92 O
ATOM 2 P C B1949 -36.149 104.405 135.613 1.00 0.01 P
ATOM 3 OP1 C B1949 -35.622 105.759 135.289 1.00 0.01 O
ATOM 4 OP2 C B1949 -37.493 104.024 135.141 1.00 0.01 O
ATOM 5 O5' C B1949 -35.119 103.313 135.157 1.00 0.01 O
ATOM 6 C5' C B1949 -33.776 103.393 135.540 1.00 0.01 C
ATOM 7 C4' C B1949 -33.107 102.089 135.305 1.00 0.01 C
ATOM 8 O4' C B1949 -33.838 101.057 135.994 1.00 0.01 O
ATOM 9 C3' C B1949 -33.097 101.611 133.873 1.00 0.01 C
ATOM 10 O3' C B1949 -32.098 102.228 133.102 1.00 0.01 O
ATOM 11 C2' C B1949 -32.900 100.119 134.041 1.00 0.01 C
ATOM 12 O2' C B1949 -31.548 99.829 134.360 1.00 0.01 O
ATOM 13 C1' C B1949 -33.747 99.852 135.274 1.00 0.01 C
ATOM 14 N1 C B1949 -35.098 99.411 134.948 1.00 0.07 N
ATOM 15 C2 C B1949 -35.260 98.144 134.436 1.00 0.07 C
ATOM 16 O2 C B1949 -34.234 97.520 134.253 1.00 0.07 O
ATOM 17 N3 C B1949 -36.485 97.654 134.146 1.00 0.07 N
ATOM 18 C4 C B1949 -37.550 98.444 134.383 1.00 0.07 C
ATOM 19 N4 C B1949 -38.783 97.988 134.101 1.00 0.07 N
ATOM 20 C5 C B1949 -37.403 99.770 134.929 1.00 0.07 C
ATOM 21 C6 C B1949 -36.164 100.206 135.205 1.00 0.07 C
ATOM 22 P C B1950 -32.495 103.201 131.886 1.00 0.98 P
ATOM 23 OP1 C B1950 -31.776 104.473 132.122 1.00 0.98 O
ATOM 24 OP2 C B1950 -33.982 103.223 131.766 1.00 0.98 O
ATOM 25 O5' C B1950 -31.876 102.439 130.648 1.00 0.98 O
TER
Atoms:
OP1: (-28.911,107.108,143.815)
OP2: (-26.755,106.860,142.445)
C3': (-30.726,104.569,140.032)
C1': (-30.202,105.307,137.877)
C5': (-30.357,106.890,141.093)
O6: (-25.031,102.973,136.119)
O4': (-30.319,106.452,138.698)
C8: (-27.657,105.563,138.250)
C2: (-28.455,102.415,135.430)
C6: (-26.248,103.129,136.183)
C5: (-26.972,104.056,136.952)
C4: (-28.340,104.038,136.862)
P: (-28.198,107.245,142.520)
C4': (-30.944,106.075,139.962)
C2': (-30.923,104.164,138.591)
O2': (-32.297,104.219,138.254)
N1: (-27.091,102.328,135.439)
N2: (-29.100,101.554,134.632)
N3: (-29.154,103.267,136.141)
N7: (-26.543,105.024,137.835)
N9: (-28.775,105.010,137.685)
O5': (-29.019,106.509,141.379)
O3': (-31.598,103.916,140.924)
OP2: (-26.755,106.860,142.445)
C3': (-30.726,104.569,140.032)
C1': (-30.202,105.307,137.877)
C5': (-30.357,106.890,141.093)
O6: (-25.031,102.973,136.119)
O4': (-30.319,106.452,138.698)
C8: (-27.657,105.563,138.250)
C2: (-28.455,102.415,135.430)
C6: (-26.248,103.129,136.183)
C5: (-26.972,104.056,136.952)
C4: (-28.340,104.038,136.862)
P: (-28.198,107.245,142.520)
C4': (-30.944,106.075,139.962)
C2': (-30.923,104.164,138.591)
O2': (-32.297,104.219,138.254)
N1: (-27.091,102.328,135.439)
N2: (-29.100,101.554,134.632)
N3: (-29.154,103.267,136.141)
N7: (-26.543,105.024,137.835)
N9: (-28.775,105.010,137.685)
O5': (-29.019,106.509,141.379)
O3': (-31.598,103.916,140.924)
C2: (-35.260,98.144,134.436)
OP1: (-35.622,105.759,135.289)
OP2: (-37.493,104.024,135.141)
C4: (-37.550,98.444,134.383)
O5': (-35.119,103.313,135.157)
C3': (-33.097,101.611,133.873)
C1': (-33.747,99.852,135.274)
O4': (-33.838,101.057,135.994)
C5': (-33.776,103.393,135.540)
P: (-36.149,104.405,135.613)
O2: (-34.234,97.520,134.253)
C4': (-33.107,102.089,135.305)
C2': (-32.900,100.119,134.041)
O2': (-31.548,99.829,134.360)
N1: (-35.098,99.411,134.948)
N3: (-36.485,97.654,134.146)
N4: (-38.783,97.988,134.101)
C6: (-36.164,100.206,135.205)
C5: (-37.403,99.770,134.929)
O3': (-32.098,102.228,133.102)
OP1: (-35.622,105.759,135.289)
OP2: (-37.493,104.024,135.141)
C4: (-37.550,98.444,134.383)
O5': (-35.119,103.313,135.157)
C3': (-33.097,101.611,133.873)
C1': (-33.747,99.852,135.274)
O4': (-33.838,101.057,135.994)
C5': (-33.776,103.393,135.540)
P: (-36.149,104.405,135.613)
O2: (-34.234,97.520,134.253)
C4': (-33.107,102.089,135.305)
C2': (-32.900,100.119,134.041)
O2': (-31.548,99.829,134.360)
N1: (-35.098,99.411,134.948)
N3: (-36.485,97.654,134.146)
N4: (-38.783,97.988,134.101)
C6: (-36.164,100.206,135.205)
C5: (-37.403,99.770,134.929)
O3': (-32.098,102.228,133.102)
Image (generated by PyMOL):