Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2567:2582
Extra
PDB:
ATOM 1 O3' A A 566 -56.657 5.921 39.377 1.00 73.20 O
ATOM 2 P G A 567 -56.481 7.121 40.429 1.00 70.61 P
ATOM 3 OP1 G A 567 -55.567 8.120 39.800 1.00 70.29 O
ATOM 4 OP2 G A 567 -56.089 6.515 41.735 1.00 69.89 O
ATOM 5 O5' G A 567 -57.962 7.712 40.539 1.00 71.07 O
ATOM 6 C5' G A 567 -58.517 7.989 41.814 1.00 70.55 C
ATOM 7 C4' G A 567 -60.011 7.832 41.838 1.00 71.30 C
ATOM 8 O4' G A 567 -60.389 6.428 41.665 1.00 71.97 O
ATOM 9 C3' G A 567 -60.681 8.193 43.144 1.00 70.83 C
ATOM 10 O3' G A 567 -60.744 9.591 43.391 1.00 70.37 O
ATOM 11 C2' G A 567 -62.029 7.509 42.978 1.00 71.78 C
ATOM 12 O2' G A 567 -62.818 8.174 41.993 1.00 72.56 O
ATOM 13 C1' G A 567 -61.567 6.167 42.417 1.00 72.22 C
ATOM 14 N9 G A 567 -61.226 5.244 43.515 1.00 71.73 N
ATOM 15 C8 G A 567 -59.979 4.843 43.907 1.00 71.03 C
ATOM 16 N7 G A 567 -59.966 4.057 44.948 1.00 70.74 N
ATOM 17 C5 G A 567 -61.293 3.948 45.292 1.00 71.25 C
ATOM 18 C6 G A 567 -61.889 3.230 46.357 1.00 71.25 C
ATOM 19 O6 G A 567 -61.346 2.541 47.210 1.00 70.79 O
ATOM 20 N1 G A 567 -63.274 3.371 46.363 1.00 71.91 N
ATOM 21 C2 G A 567 -63.999 4.120 45.454 1.00 72.51 C
ATOM 22 N2 G A 567 -65.337 4.121 45.648 1.00 73.13 N
ATOM 23 N3 G A 567 -63.449 4.809 44.454 1.00 72.52 N
ATOM 24 C4 G A 567 -62.096 4.685 44.429 1.00 71.86 C
ATOM 25 P C A 568 -60.863 10.136 44.902 1.00 69.60 P
ATOM 26 OP1 C A 568 -60.769 11.617 44.857 1.00 69.24 O
ATOM 27 OP2 C A 568 -59.893 9.380 45.720 1.00 68.90 O
ATOM 28 O5' C A 568 -62.324 9.722 45.301 1.00 70.25 O
TER
ATOM 1 O3' U B 581 -70.652 6.516 44.856 1.00 76.74 O
ATOM 2 P C B 582 -70.557 7.238 43.436 1.00 76.89 P
ATOM 3 OP1 C B 582 -70.643 8.720 43.689 1.00 76.43 O
ATOM 4 OP2 C B 582 -71.561 6.592 42.553 1.00 78.18 O
ATOM 5 O5' C B 582 -69.102 6.867 42.960 1.00 76.36 O
ATOM 6 C5' C B 582 -67.959 7.300 43.696 1.00 75.16 C
ATOM 7 C4' C B 582 -66.708 6.860 43.008 1.00 74.92 C
ATOM 8 O4' C B 582 -66.621 5.420 43.094 1.00 75.23 O
ATOM 9 C3' C B 582 -66.651 7.193 41.516 1.00 75.62 C
ATOM 10 O3' C B 582 -65.993 8.437 41.264 1.00 75.07 O
ATOM 11 C2' C B 582 -65.963 5.988 40.884 1.00 75.92 C
ATOM 12 O2' C B 582 -64.555 6.149 40.901 1.00 75.08 O
ATOM 13 C1' C B 582 -66.323 4.857 41.846 1.00 75.91 C
ATOM 14 N1 C B 582 -67.496 4.040 41.407 1.00 77.08 N
ATOM 15 C2 C B 582 -67.528 3.251 40.251 1.00 78.00 C
ATOM 16 O2 C B 582 -66.577 3.271 39.486 1.00 77.89 O
ATOM 17 N3 C B 582 -68.626 2.503 39.940 1.00 79.07 N
ATOM 18 C4 C B 582 -69.687 2.492 40.754 1.00 79.24 C
ATOM 19 N4 C B 582 -70.738 1.747 40.432 1.00 80.32 N
ATOM 20 C5 C B 582 -69.677 3.253 41.962 1.00 78.31 C
ATOM 21 C6 C B 582 -68.577 3.977 42.240 1.00 77.27 C
ATOM 22 P C B 583 -66.483 9.407 40.076 1.00 82.09 P
ATOM 23 OP1 C B 583 -65.561 10.567 40.029 1.00 81.32 O
ATOM 24 OP2 C B 583 -67.932 9.659 40.279 1.00 82.77 O
ATOM 25 O5' C B 583 -66.279 8.494 38.800 1.00 82.96 O
TER
ATOM 2 P G A 567 -56.481 7.121 40.429 1.00 70.61 P
ATOM 3 OP1 G A 567 -55.567 8.120 39.800 1.00 70.29 O
ATOM 4 OP2 G A 567 -56.089 6.515 41.735 1.00 69.89 O
ATOM 5 O5' G A 567 -57.962 7.712 40.539 1.00 71.07 O
ATOM 6 C5' G A 567 -58.517 7.989 41.814 1.00 70.55 C
ATOM 7 C4' G A 567 -60.011 7.832 41.838 1.00 71.30 C
ATOM 8 O4' G A 567 -60.389 6.428 41.665 1.00 71.97 O
ATOM 9 C3' G A 567 -60.681 8.193 43.144 1.00 70.83 C
ATOM 10 O3' G A 567 -60.744 9.591 43.391 1.00 70.37 O
ATOM 11 C2' G A 567 -62.029 7.509 42.978 1.00 71.78 C
ATOM 12 O2' G A 567 -62.818 8.174 41.993 1.00 72.56 O
ATOM 13 C1' G A 567 -61.567 6.167 42.417 1.00 72.22 C
ATOM 14 N9 G A 567 -61.226 5.244 43.515 1.00 71.73 N
ATOM 15 C8 G A 567 -59.979 4.843 43.907 1.00 71.03 C
ATOM 16 N7 G A 567 -59.966 4.057 44.948 1.00 70.74 N
ATOM 17 C5 G A 567 -61.293 3.948 45.292 1.00 71.25 C
ATOM 18 C6 G A 567 -61.889 3.230 46.357 1.00 71.25 C
ATOM 19 O6 G A 567 -61.346 2.541 47.210 1.00 70.79 O
ATOM 20 N1 G A 567 -63.274 3.371 46.363 1.00 71.91 N
ATOM 21 C2 G A 567 -63.999 4.120 45.454 1.00 72.51 C
ATOM 22 N2 G A 567 -65.337 4.121 45.648 1.00 73.13 N
ATOM 23 N3 G A 567 -63.449 4.809 44.454 1.00 72.52 N
ATOM 24 C4 G A 567 -62.096 4.685 44.429 1.00 71.86 C
ATOM 25 P C A 568 -60.863 10.136 44.902 1.00 69.60 P
ATOM 26 OP1 C A 568 -60.769 11.617 44.857 1.00 69.24 O
ATOM 27 OP2 C A 568 -59.893 9.380 45.720 1.00 68.90 O
ATOM 28 O5' C A 568 -62.324 9.722 45.301 1.00 70.25 O
TER
ATOM 1 O3' U B 581 -70.652 6.516 44.856 1.00 76.74 O
ATOM 2 P C B 582 -70.557 7.238 43.436 1.00 76.89 P
ATOM 3 OP1 C B 582 -70.643 8.720 43.689 1.00 76.43 O
ATOM 4 OP2 C B 582 -71.561 6.592 42.553 1.00 78.18 O
ATOM 5 O5' C B 582 -69.102 6.867 42.960 1.00 76.36 O
ATOM 6 C5' C B 582 -67.959 7.300 43.696 1.00 75.16 C
ATOM 7 C4' C B 582 -66.708 6.860 43.008 1.00 74.92 C
ATOM 8 O4' C B 582 -66.621 5.420 43.094 1.00 75.23 O
ATOM 9 C3' C B 582 -66.651 7.193 41.516 1.00 75.62 C
ATOM 10 O3' C B 582 -65.993 8.437 41.264 1.00 75.07 O
ATOM 11 C2' C B 582 -65.963 5.988 40.884 1.00 75.92 C
ATOM 12 O2' C B 582 -64.555 6.149 40.901 1.00 75.08 O
ATOM 13 C1' C B 582 -66.323 4.857 41.846 1.00 75.91 C
ATOM 14 N1 C B 582 -67.496 4.040 41.407 1.00 77.08 N
ATOM 15 C2 C B 582 -67.528 3.251 40.251 1.00 78.00 C
ATOM 16 O2 C B 582 -66.577 3.271 39.486 1.00 77.89 O
ATOM 17 N3 C B 582 -68.626 2.503 39.940 1.00 79.07 N
ATOM 18 C4 C B 582 -69.687 2.492 40.754 1.00 79.24 C
ATOM 19 N4 C B 582 -70.738 1.747 40.432 1.00 80.32 N
ATOM 20 C5 C B 582 -69.677 3.253 41.962 1.00 78.31 C
ATOM 21 C6 C B 582 -68.577 3.977 42.240 1.00 77.27 C
ATOM 22 P C B 583 -66.483 9.407 40.076 1.00 82.09 P
ATOM 23 OP1 C B 583 -65.561 10.567 40.029 1.00 81.32 O
ATOM 24 OP2 C B 583 -67.932 9.659 40.279 1.00 82.77 O
ATOM 25 O5' C B 583 -66.279 8.494 38.800 1.00 82.96 O
TER
Atoms:
OP1: (-55.567,8.120,39.800)
OP2: (-56.089,6.515,41.735)
C3': (-60.681,8.193,43.144)
C1': (-61.567,6.167,42.417)
C5': (-58.517,7.989,41.814)
O6: (-61.346,2.541,47.210)
O4': (-60.389,6.428,41.665)
C8: (-59.979,4.843,43.907)
C2: (-63.999,4.120,45.454)
C6: (-61.889,3.230,46.357)
C5: (-61.293,3.948,45.292)
C4: (-62.096,4.685,44.429)
P: (-56.481,7.121,40.429)
C4': (-60.011,7.832,41.838)
C2': (-62.029,7.509,42.978)
O2': (-62.818,8.174,41.993)
N1: (-63.274,3.371,46.363)
N2: (-65.337,4.121,45.648)
N3: (-63.449,4.809,44.454)
N7: (-59.966,4.057,44.948)
N9: (-61.226,5.244,43.515)
O5': (-57.962,7.712,40.539)
O3': (-60.744,9.591,43.391)
OP2: (-56.089,6.515,41.735)
C3': (-60.681,8.193,43.144)
C1': (-61.567,6.167,42.417)
C5': (-58.517,7.989,41.814)
O6: (-61.346,2.541,47.210)
O4': (-60.389,6.428,41.665)
C8: (-59.979,4.843,43.907)
C2: (-63.999,4.120,45.454)
C6: (-61.889,3.230,46.357)
C5: (-61.293,3.948,45.292)
C4: (-62.096,4.685,44.429)
P: (-56.481,7.121,40.429)
C4': (-60.011,7.832,41.838)
C2': (-62.029,7.509,42.978)
O2': (-62.818,8.174,41.993)
N1: (-63.274,3.371,46.363)
N2: (-65.337,4.121,45.648)
N3: (-63.449,4.809,44.454)
N7: (-59.966,4.057,44.948)
N9: (-61.226,5.244,43.515)
O5': (-57.962,7.712,40.539)
O3': (-60.744,9.591,43.391)
C2: (-67.528,3.251,40.251)
OP1: (-70.643,8.720,43.689)
OP2: (-71.561,6.592,42.553)
C4: (-69.687,2.492,40.754)
O5': (-69.102,6.867,42.960)
C3': (-66.651,7.193,41.516)
C1': (-66.323,4.857,41.846)
O4': (-66.621,5.420,43.094)
C5': (-67.959,7.300,43.696)
P: (-70.557,7.238,43.436)
O2: (-66.577,3.271,39.486)
C4': (-66.708,6.860,43.008)
C2': (-65.963,5.988,40.884)
O2': (-64.555,6.149,40.901)
N1: (-67.496,4.040,41.407)
N3: (-68.626,2.503,39.940)
N4: (-70.738,1.747,40.432)
C6: (-68.577,3.977,42.240)
C5: (-69.677,3.253,41.962)
O3': (-65.993,8.437,41.264)
OP1: (-70.643,8.720,43.689)
OP2: (-71.561,6.592,42.553)
C4: (-69.687,2.492,40.754)
O5': (-69.102,6.867,42.960)
C3': (-66.651,7.193,41.516)
C1': (-66.323,4.857,41.846)
O4': (-66.621,5.420,43.094)
C5': (-67.959,7.300,43.696)
P: (-70.557,7.238,43.436)
O2: (-66.577,3.271,39.486)
C4': (-66.708,6.860,43.008)
C2': (-65.963,5.988,40.884)
O2': (-64.555,6.149,40.901)
N1: (-67.496,4.040,41.407)
N3: (-68.626,2.503,39.940)
N4: (-70.738,1.747,40.432)
C6: (-68.577,3.977,42.240)
C5: (-69.677,3.253,41.962)
O3': (-65.993,8.437,41.264)
Image (generated by PyMOL):