Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:25:2571
Extra
PDB:
ATOM 1 O3' U A 4 -80.203 10.246 64.534 1.00 80.93 O
ATOM 2 P G A 5 -79.393 8.929 64.989 1.00 75.54 P
ATOM 3 OP1 G A 5 -80.194 7.763 64.591 1.00 76.51 O
ATOM 4 OP2 G A 5 -79.056 9.097 66.403 1.00 74.91 O
ATOM 5 O5' G A 5 -78.086 8.981 64.102 1.00 74.86 O
ATOM 6 C5' G A 5 -78.084 8.387 62.824 1.00 75.37 C
ATOM 7 C4' G A 5 -76.715 8.369 62.252 1.00 74.62 C
ATOM 8 O4' G A 5 -76.174 9.712 62.282 1.00 73.91 O
ATOM 9 C3' G A 5 -75.688 7.551 63.023 1.00 73.92 C
ATOM 10 O3' G A 5 -75.770 6.155 62.763 1.00 74.43 O
ATOM 11 C2' G A 5 -74.380 8.184 62.574 1.00 73.04 C
ATOM 12 O2' G A 5 -74.053 7.752 61.271 1.00 73.33 O
ATOM 13 C1' G A 5 -74.771 9.657 62.493 1.00 72.94 C
ATOM 14 N9 G A 5 -74.443 10.386 63.733 1.00 72.21 N
ATOM 15 C8 G A 5 -75.383 10.899 64.598 1.00 72.47 C
ATOM 16 N7 G A 5 -74.846 11.513 65.618 1.00 71.72 N
ATOM 17 C5 G A 5 -73.489 11.382 65.430 1.00 70.93 C
ATOM 18 C6 G A 5 -72.461 11.861 66.253 1.00 69.99 C
ATOM 19 O6 G A 5 -72.594 12.482 67.312 1.00 69.69 O
ATOM 20 N1 G A 5 -71.217 11.555 65.745 1.00 69.42 N
ATOM 21 C2 G A 5 -71.041 10.878 64.599 1.00 69.76 C
ATOM 22 N2 G A 5 -69.780 10.716 64.326 1.00 69.12 N
ATOM 23 N3 G A 5 -71.963 10.407 63.793 1.00 70.64 N
ATOM 24 C4 G A 5 -73.195 10.694 64.273 1.00 71.20 C
ATOM 25 P G A 6 -75.367 5.072 63.897 1.00 69.95 P
ATOM 26 OP1 G A 6 -75.579 3.729 63.318 1.00 70.65 O
ATOM 27 OP2 G A 6 -76.075 5.428 65.144 1.00 69.98 O
ATOM 28 O5' G A 6 -73.830 5.326 64.072 1.00 68.85 O
TER
ATOM 1 O3' G B 570 -63.847 12.893 57.465 1.00 77.23 O
ATOM 2 P C B 571 -63.656 11.312 57.272 1.00 67.92 P
ATOM 3 OP1 C B 571 -62.267 10.997 57.659 1.00 67.16 O
ATOM 4 OP2 C B 571 -64.115 10.979 55.885 1.00 68.73 O
ATOM 5 O5' C B 571 -64.652 10.707 58.340 1.00 68.22 O
ATOM 6 C5' C B 571 -64.675 11.225 59.653 1.00 67.69 C
ATOM 7 C4' C B 571 -65.899 10.785 60.376 1.00 68.22 C
ATOM 8 O4' C B 571 -67.050 11.500 59.858 1.00 68.84 O
ATOM 9 C3' C B 571 -66.261 9.329 60.191 1.00 68.83 C
ATOM 10 O3' C B 571 -65.521 8.462 61.026 1.00 68.40 O
ATOM 11 C2' C B 571 -67.747 9.321 60.469 1.00 69.56 C
ATOM 12 O2' C B 571 -67.971 9.397 61.865 1.00 69.25 O
ATOM 13 C1' C B 571 -68.171 10.650 59.839 1.00 69.67 C
ATOM 14 N1 C B 571 -68.618 10.511 58.425 1.00 70.43 N
ATOM 15 C2 C B 571 -69.980 10.413 58.028 1.00 71.38 C
ATOM 16 O2 C B 571 -70.894 10.384 58.860 1.00 71.65 O
ATOM 17 N3 C B 571 -70.305 10.342 56.712 1.00 72.06 N
ATOM 18 C4 C B 571 -69.343 10.384 55.797 1.00 71.81 C
ATOM 19 N4 C B 571 -69.672 10.303 54.516 1.00 72.52 N
ATOM 20 C5 C B 571 -67.975 10.501 56.157 1.00 70.86 C
ATOM 21 C6 C B 571 -67.662 10.576 57.453 1.00 70.20 C
ATOM 22 P C B 572 -65.202 6.985 60.520 1.00 68.14 P
ATOM 23 OP1 C B 572 -64.504 6.261 61.620 1.00 67.67 O
ATOM 24 OP2 C B 572 -64.529 7.128 59.191 1.00 68.16 O
ATOM 25 O5' C B 572 -66.664 6.379 60.336 1.00 69.15 O
TER
ATOM 2 P G A 5 -79.393 8.929 64.989 1.00 75.54 P
ATOM 3 OP1 G A 5 -80.194 7.763 64.591 1.00 76.51 O
ATOM 4 OP2 G A 5 -79.056 9.097 66.403 1.00 74.91 O
ATOM 5 O5' G A 5 -78.086 8.981 64.102 1.00 74.86 O
ATOM 6 C5' G A 5 -78.084 8.387 62.824 1.00 75.37 C
ATOM 7 C4' G A 5 -76.715 8.369 62.252 1.00 74.62 C
ATOM 8 O4' G A 5 -76.174 9.712 62.282 1.00 73.91 O
ATOM 9 C3' G A 5 -75.688 7.551 63.023 1.00 73.92 C
ATOM 10 O3' G A 5 -75.770 6.155 62.763 1.00 74.43 O
ATOM 11 C2' G A 5 -74.380 8.184 62.574 1.00 73.04 C
ATOM 12 O2' G A 5 -74.053 7.752 61.271 1.00 73.33 O
ATOM 13 C1' G A 5 -74.771 9.657 62.493 1.00 72.94 C
ATOM 14 N9 G A 5 -74.443 10.386 63.733 1.00 72.21 N
ATOM 15 C8 G A 5 -75.383 10.899 64.598 1.00 72.47 C
ATOM 16 N7 G A 5 -74.846 11.513 65.618 1.00 71.72 N
ATOM 17 C5 G A 5 -73.489 11.382 65.430 1.00 70.93 C
ATOM 18 C6 G A 5 -72.461 11.861 66.253 1.00 69.99 C
ATOM 19 O6 G A 5 -72.594 12.482 67.312 1.00 69.69 O
ATOM 20 N1 G A 5 -71.217 11.555 65.745 1.00 69.42 N
ATOM 21 C2 G A 5 -71.041 10.878 64.599 1.00 69.76 C
ATOM 22 N2 G A 5 -69.780 10.716 64.326 1.00 69.12 N
ATOM 23 N3 G A 5 -71.963 10.407 63.793 1.00 70.64 N
ATOM 24 C4 G A 5 -73.195 10.694 64.273 1.00 71.20 C
ATOM 25 P G A 6 -75.367 5.072 63.897 1.00 69.95 P
ATOM 26 OP1 G A 6 -75.579 3.729 63.318 1.00 70.65 O
ATOM 27 OP2 G A 6 -76.075 5.428 65.144 1.00 69.98 O
ATOM 28 O5' G A 6 -73.830 5.326 64.072 1.00 68.85 O
TER
ATOM 1 O3' G B 570 -63.847 12.893 57.465 1.00 77.23 O
ATOM 2 P C B 571 -63.656 11.312 57.272 1.00 67.92 P
ATOM 3 OP1 C B 571 -62.267 10.997 57.659 1.00 67.16 O
ATOM 4 OP2 C B 571 -64.115 10.979 55.885 1.00 68.73 O
ATOM 5 O5' C B 571 -64.652 10.707 58.340 1.00 68.22 O
ATOM 6 C5' C B 571 -64.675 11.225 59.653 1.00 67.69 C
ATOM 7 C4' C B 571 -65.899 10.785 60.376 1.00 68.22 C
ATOM 8 O4' C B 571 -67.050 11.500 59.858 1.00 68.84 O
ATOM 9 C3' C B 571 -66.261 9.329 60.191 1.00 68.83 C
ATOM 10 O3' C B 571 -65.521 8.462 61.026 1.00 68.40 O
ATOM 11 C2' C B 571 -67.747 9.321 60.469 1.00 69.56 C
ATOM 12 O2' C B 571 -67.971 9.397 61.865 1.00 69.25 O
ATOM 13 C1' C B 571 -68.171 10.650 59.839 1.00 69.67 C
ATOM 14 N1 C B 571 -68.618 10.511 58.425 1.00 70.43 N
ATOM 15 C2 C B 571 -69.980 10.413 58.028 1.00 71.38 C
ATOM 16 O2 C B 571 -70.894 10.384 58.860 1.00 71.65 O
ATOM 17 N3 C B 571 -70.305 10.342 56.712 1.00 72.06 N
ATOM 18 C4 C B 571 -69.343 10.384 55.797 1.00 71.81 C
ATOM 19 N4 C B 571 -69.672 10.303 54.516 1.00 72.52 N
ATOM 20 C5 C B 571 -67.975 10.501 56.157 1.00 70.86 C
ATOM 21 C6 C B 571 -67.662 10.576 57.453 1.00 70.20 C
ATOM 22 P C B 572 -65.202 6.985 60.520 1.00 68.14 P
ATOM 23 OP1 C B 572 -64.504 6.261 61.620 1.00 67.67 O
ATOM 24 OP2 C B 572 -64.529 7.128 59.191 1.00 68.16 O
ATOM 25 O5' C B 572 -66.664 6.379 60.336 1.00 69.15 O
TER
Atoms:
OP1: (-80.194,7.763,64.591)
OP2: (-79.056,9.097,66.403)
C3': (-75.688,7.551,63.023)
C1': (-74.771,9.657,62.493)
C5': (-78.084,8.387,62.824)
O6: (-72.594,12.482,67.312)
O4': (-76.174,9.712,62.282)
C8: (-75.383,10.899,64.598)
C2: (-71.041,10.878,64.599)
C6: (-72.461,11.861,66.253)
C5: (-73.489,11.382,65.430)
C4: (-73.195,10.694,64.273)
P: (-79.393,8.929,64.989)
C4': (-76.715,8.369,62.252)
C2': (-74.380,8.184,62.574)
O2': (-74.053,7.752,61.271)
N1: (-71.217,11.555,65.745)
N2: (-69.780,10.716,64.326)
N3: (-71.963,10.407,63.793)
N7: (-74.846,11.513,65.618)
N9: (-74.443,10.386,63.733)
O5': (-78.086,8.981,64.102)
O3': (-75.770,6.155,62.763)
OP2: (-79.056,9.097,66.403)
C3': (-75.688,7.551,63.023)
C1': (-74.771,9.657,62.493)
C5': (-78.084,8.387,62.824)
O6: (-72.594,12.482,67.312)
O4': (-76.174,9.712,62.282)
C8: (-75.383,10.899,64.598)
C2: (-71.041,10.878,64.599)
C6: (-72.461,11.861,66.253)
C5: (-73.489,11.382,65.430)
C4: (-73.195,10.694,64.273)
P: (-79.393,8.929,64.989)
C4': (-76.715,8.369,62.252)
C2': (-74.380,8.184,62.574)
O2': (-74.053,7.752,61.271)
N1: (-71.217,11.555,65.745)
N2: (-69.780,10.716,64.326)
N3: (-71.963,10.407,63.793)
N7: (-74.846,11.513,65.618)
N9: (-74.443,10.386,63.733)
O5': (-78.086,8.981,64.102)
O3': (-75.770,6.155,62.763)
C2: (-69.980,10.413,58.028)
OP1: (-62.267,10.997,57.659)
OP2: (-64.115,10.979,55.885)
C4: (-69.343,10.384,55.797)
O5': (-64.652,10.707,58.340)
C3': (-66.261,9.329,60.191)
C1': (-68.171,10.650,59.839)
O4': (-67.050,11.500,59.858)
C5': (-64.675,11.225,59.653)
P: (-63.656,11.312,57.272)
O2: (-70.894,10.384,58.860)
C4': (-65.899,10.785,60.376)
C2': (-67.747,9.321,60.469)
O2': (-67.971,9.397,61.865)
N1: (-68.618,10.511,58.425)
N3: (-70.305,10.342,56.712)
N4: (-69.672,10.303,54.516)
C6: (-67.662,10.576,57.453)
C5: (-67.975,10.501,56.157)
O3': (-65.521,8.462,61.026)
OP1: (-62.267,10.997,57.659)
OP2: (-64.115,10.979,55.885)
C4: (-69.343,10.384,55.797)
O5': (-64.652,10.707,58.340)
C3': (-66.261,9.329,60.191)
C1': (-68.171,10.650,59.839)
O4': (-67.050,11.500,59.858)
C5': (-64.675,11.225,59.653)
P: (-63.656,11.312,57.272)
O2: (-70.894,10.384,58.860)
C4': (-65.899,10.785,60.376)
C2': (-67.747,9.321,60.469)
O2': (-67.971,9.397,61.865)
N1: (-68.618,10.511,58.425)
N3: (-70.305,10.342,56.712)
N4: (-69.672,10.303,54.516)
C6: (-67.662,10.576,57.453)
C5: (-67.975,10.501,56.157)
O3': (-65.521,8.462,61.026)
Image (generated by PyMOL):