Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1878:1751
Extra
PDB:
ATOM 1 O3' A A 877 50.295 -12.128 88.472 1.00 34.70 O
ATOM 2 P G A 878 48.760 -11.681 88.372 1.00 32.13 P
ATOM 3 OP1 G A 878 48.579 -11.341 86.954 1.00 31.92 O
ATOM 4 OP2 G A 878 48.472 -10.682 89.422 1.00 32.27 O
ATOM 5 O5' G A 878 47.914 -12.981 88.620 1.00 32.15 O
ATOM 6 C5' G A 878 48.363 -14.048 89.384 1.00 32.32 C
ATOM 7 C4' G A 878 47.282 -15.063 89.457 1.00 32.31 C
ATOM 8 O4' G A 878 46.096 -14.442 90.013 1.00 32.33 O
ATOM 9 C3' G A 878 46.847 -15.613 88.119 1.00 32.11 C
ATOM 10 O3' G A 878 47.633 -16.728 87.732 1.00 32.14 O
ATOM 11 C2' G A 878 45.416 -15.977 88.388 1.00 32.12 C
ATOM 12 O2' G A 878 45.385 -17.158 89.114 1.00 32.27 O
ATOM 13 C1' G A 878 44.976 -14.882 89.335 1.00 32.20 C
ATOM 14 N9 G A 878 44.359 -13.727 88.666 1.00 32.05 N
ATOM 15 C8 G A 878 44.780 -12.445 88.854 1.00 32.07 C
ATOM 16 N7 G A 878 44.064 -11.566 88.219 1.00 31.94 N
ATOM 17 C5 G A 878 43.082 -12.313 87.623 1.00 31.85 C
ATOM 18 C6 G A 878 42.003 -11.917 86.839 1.00 31.72 C
ATOM 19 O6 G A 878 41.703 -10.804 86.516 1.00 31.66 O
ATOM 20 N1 G A 878 41.227 -12.941 86.387 1.00 31.66 N
ATOM 21 C2 G A 878 41.435 -14.239 86.691 1.00 31.74 C
ATOM 22 N2 G A 878 40.549 -15.121 86.183 1.00 31.69 N
ATOM 23 N3 G A 878 42.422 -14.627 87.461 1.00 31.87 N
ATOM 24 C4 G A 878 43.223 -13.635 87.887 1.00 31.91 C
ATOM 25 P U A 879 48.422 -16.780 86.332 1.00 35.49 P
ATOM 26 OP1 U A 879 49.422 -17.892 86.439 1.00 35.61 O
ATOM 27 OP2 U A 879 48.889 -15.415 86.027 1.00 35.41 O
ATOM 28 O5' U A 879 47.283 -17.206 85.322 1.00 35.33 O
TER
ATOM 1 O3' A B 750 40.763 -6.358 84.580 1.00 37.76 O
ATOM 2 P A B 751 39.601 -6.086 85.694 1.00 38.04 P
ATOM 3 OP1 A B 751 39.463 -4.633 85.854 1.00 38.10 O
ATOM 4 OP2 A B 751 39.924 -6.857 86.858 1.00 38.17 O
ATOM 5 O5' A B 751 38.294 -6.678 85.029 1.00 37.94 O
ATOM 6 C5' A B 751 37.245 -5.859 84.600 1.00 37.92 C
ATOM 7 C4' A B 751 36.087 -6.705 84.204 1.00 37.87 C
ATOM 8 O4' A B 751 36.527 -7.808 83.406 1.00 37.76 O
ATOM 9 C3' A B 751 35.340 -7.367 85.335 1.00 38.01 C
ATOM 10 O3' A B 751 34.451 -6.485 85.951 1.00 38.12 O
ATOM 11 C2' A B 751 34.666 -8.584 84.673 1.00 37.92 C
ATOM 12 O2' A B 751 33.295 -8.333 84.321 1.00 37.92 O
ATOM 13 C1' A B 751 35.526 -8.779 83.402 1.00 37.76 C
ATOM 14 N9 A B 751 36.148 -10.101 83.363 1.00 37.74 N
ATOM 15 C8 A B 751 35.827 -11.120 82.515 1.00 37.66 C
ATOM 16 N7 A B 751 36.489 -12.224 82.721 1.00 37.68 N
ATOM 17 C5 A B 751 37.280 -11.928 83.790 1.00 37.79 C
ATOM 18 C6 A B 751 38.180 -12.706 84.495 1.00 37.87 C
ATOM 19 N6 A B 751 38.445 -13.966 84.181 1.00 37.86 N
ATOM 20 N1 A B 751 38.813 -12.114 85.535 1.00 37.98 N
ATOM 21 C2 A B 751 38.554 -10.827 85.837 1.00 38.01 C
ATOM 22 N3 A B 751 37.711 -9.997 85.240 1.00 37.94 N
ATOM 23 C4 A B 751 37.091 -10.619 84.212 1.00 37.83 C
ATOM 24 P A B 752 34.425 -6.375 87.512 1.00 34.71 P
ATOM 25 OP1 A B 752 33.495 -5.266 87.866 1.00 34.81 O
ATOM 26 OP2 A B 752 35.845 -6.315 87.991 1.00 34.75 O
ATOM 27 O5' A B 752 33.772 -7.757 87.898 1.00 34.75 O
TER
ATOM 2 P G A 878 48.760 -11.681 88.372 1.00 32.13 P
ATOM 3 OP1 G A 878 48.579 -11.341 86.954 1.00 31.92 O
ATOM 4 OP2 G A 878 48.472 -10.682 89.422 1.00 32.27 O
ATOM 5 O5' G A 878 47.914 -12.981 88.620 1.00 32.15 O
ATOM 6 C5' G A 878 48.363 -14.048 89.384 1.00 32.32 C
ATOM 7 C4' G A 878 47.282 -15.063 89.457 1.00 32.31 C
ATOM 8 O4' G A 878 46.096 -14.442 90.013 1.00 32.33 O
ATOM 9 C3' G A 878 46.847 -15.613 88.119 1.00 32.11 C
ATOM 10 O3' G A 878 47.633 -16.728 87.732 1.00 32.14 O
ATOM 11 C2' G A 878 45.416 -15.977 88.388 1.00 32.12 C
ATOM 12 O2' G A 878 45.385 -17.158 89.114 1.00 32.27 O
ATOM 13 C1' G A 878 44.976 -14.882 89.335 1.00 32.20 C
ATOM 14 N9 G A 878 44.359 -13.727 88.666 1.00 32.05 N
ATOM 15 C8 G A 878 44.780 -12.445 88.854 1.00 32.07 C
ATOM 16 N7 G A 878 44.064 -11.566 88.219 1.00 31.94 N
ATOM 17 C5 G A 878 43.082 -12.313 87.623 1.00 31.85 C
ATOM 18 C6 G A 878 42.003 -11.917 86.839 1.00 31.72 C
ATOM 19 O6 G A 878 41.703 -10.804 86.516 1.00 31.66 O
ATOM 20 N1 G A 878 41.227 -12.941 86.387 1.00 31.66 N
ATOM 21 C2 G A 878 41.435 -14.239 86.691 1.00 31.74 C
ATOM 22 N2 G A 878 40.549 -15.121 86.183 1.00 31.69 N
ATOM 23 N3 G A 878 42.422 -14.627 87.461 1.00 31.87 N
ATOM 24 C4 G A 878 43.223 -13.635 87.887 1.00 31.91 C
ATOM 25 P U A 879 48.422 -16.780 86.332 1.00 35.49 P
ATOM 26 OP1 U A 879 49.422 -17.892 86.439 1.00 35.61 O
ATOM 27 OP2 U A 879 48.889 -15.415 86.027 1.00 35.41 O
ATOM 28 O5' U A 879 47.283 -17.206 85.322 1.00 35.33 O
TER
ATOM 1 O3' A B 750 40.763 -6.358 84.580 1.00 37.76 O
ATOM 2 P A B 751 39.601 -6.086 85.694 1.00 38.04 P
ATOM 3 OP1 A B 751 39.463 -4.633 85.854 1.00 38.10 O
ATOM 4 OP2 A B 751 39.924 -6.857 86.858 1.00 38.17 O
ATOM 5 O5' A B 751 38.294 -6.678 85.029 1.00 37.94 O
ATOM 6 C5' A B 751 37.245 -5.859 84.600 1.00 37.92 C
ATOM 7 C4' A B 751 36.087 -6.705 84.204 1.00 37.87 C
ATOM 8 O4' A B 751 36.527 -7.808 83.406 1.00 37.76 O
ATOM 9 C3' A B 751 35.340 -7.367 85.335 1.00 38.01 C
ATOM 10 O3' A B 751 34.451 -6.485 85.951 1.00 38.12 O
ATOM 11 C2' A B 751 34.666 -8.584 84.673 1.00 37.92 C
ATOM 12 O2' A B 751 33.295 -8.333 84.321 1.00 37.92 O
ATOM 13 C1' A B 751 35.526 -8.779 83.402 1.00 37.76 C
ATOM 14 N9 A B 751 36.148 -10.101 83.363 1.00 37.74 N
ATOM 15 C8 A B 751 35.827 -11.120 82.515 1.00 37.66 C
ATOM 16 N7 A B 751 36.489 -12.224 82.721 1.00 37.68 N
ATOM 17 C5 A B 751 37.280 -11.928 83.790 1.00 37.79 C
ATOM 18 C6 A B 751 38.180 -12.706 84.495 1.00 37.87 C
ATOM 19 N6 A B 751 38.445 -13.966 84.181 1.00 37.86 N
ATOM 20 N1 A B 751 38.813 -12.114 85.535 1.00 37.98 N
ATOM 21 C2 A B 751 38.554 -10.827 85.837 1.00 38.01 C
ATOM 22 N3 A B 751 37.711 -9.997 85.240 1.00 37.94 N
ATOM 23 C4 A B 751 37.091 -10.619 84.212 1.00 37.83 C
ATOM 24 P A B 752 34.425 -6.375 87.512 1.00 34.71 P
ATOM 25 OP1 A B 752 33.495 -5.266 87.866 1.00 34.81 O
ATOM 26 OP2 A B 752 35.845 -6.315 87.991 1.00 34.75 O
ATOM 27 O5' A B 752 33.772 -7.757 87.898 1.00 34.75 O
TER
Atoms:
OP1: (48.579,-11.341,86.954)
OP2: (48.472,-10.682,89.422)
C3': (46.847,-15.613,88.119)
C1': (44.976,-14.882,89.335)
C5': (48.363,-14.048,89.384)
O6: (41.703,-10.804,86.516)
O4': (46.096,-14.442,90.013)
C8: (44.780,-12.445,88.854)
C2: (41.435,-14.239,86.691)
C6: (42.003,-11.917,86.839)
C5: (43.082,-12.313,87.623)
C4: (43.223,-13.635,87.887)
P: (48.760,-11.681,88.372)
C4': (47.282,-15.063,89.457)
C2': (45.416,-15.977,88.388)
O2': (45.385,-17.158,89.114)
N1: (41.227,-12.941,86.387)
N2: (40.549,-15.121,86.183)
N3: (42.422,-14.627,87.461)
N7: (44.064,-11.566,88.219)
N9: (44.359,-13.727,88.666)
O5': (47.914,-12.981,88.620)
O3': (47.633,-16.728,87.732)
OP2: (48.472,-10.682,89.422)
C3': (46.847,-15.613,88.119)
C1': (44.976,-14.882,89.335)
C5': (48.363,-14.048,89.384)
O6: (41.703,-10.804,86.516)
O4': (46.096,-14.442,90.013)
C8: (44.780,-12.445,88.854)
C2: (41.435,-14.239,86.691)
C6: (42.003,-11.917,86.839)
C5: (43.082,-12.313,87.623)
C4: (43.223,-13.635,87.887)
P: (48.760,-11.681,88.372)
C4': (47.282,-15.063,89.457)
C2': (45.416,-15.977,88.388)
O2': (45.385,-17.158,89.114)
N1: (41.227,-12.941,86.387)
N2: (40.549,-15.121,86.183)
N3: (42.422,-14.627,87.461)
N7: (44.064,-11.566,88.219)
N9: (44.359,-13.727,88.666)
O5': (47.914,-12.981,88.620)
O3': (47.633,-16.728,87.732)
OP1: (39.463,-4.633,85.854)
OP2: (39.924,-6.857,86.858)
C3': (35.340,-7.367,85.335)
C1': (35.526,-8.779,83.402)
C5': (37.245,-5.859,84.600)
O4': (36.527,-7.808,83.406)
C8: (35.827,-11.120,82.515)
O2': (33.295,-8.333,84.321)
C6: (38.180,-12.706,84.495)
C5: (37.280,-11.928,83.790)
C4: (37.091,-10.619,84.212)
P: (39.601,-6.086,85.694)
C4': (36.087,-6.705,84.204)
C2': (34.666,-8.584,84.673)
C2: (38.554,-10.827,85.837)
N1: (38.813,-12.114,85.535)
N3: (37.711,-9.997,85.240)
N6: (38.445,-13.966,84.181)
N7: (36.489,-12.224,82.721)
N9: (36.148,-10.101,83.363)
O5': (38.294,-6.678,85.029)
O3': (34.451,-6.485,85.951)
OP2: (39.924,-6.857,86.858)
C3': (35.340,-7.367,85.335)
C1': (35.526,-8.779,83.402)
C5': (37.245,-5.859,84.600)
O4': (36.527,-7.808,83.406)
C8: (35.827,-11.120,82.515)
O2': (33.295,-8.333,84.321)
C6: (38.180,-12.706,84.495)
C5: (37.280,-11.928,83.790)
C4: (37.091,-10.619,84.212)
P: (39.601,-6.086,85.694)
C4': (36.087,-6.705,84.204)
C2': (34.666,-8.584,84.673)
C2: (38.554,-10.827,85.837)
N1: (38.813,-12.114,85.535)
N3: (37.711,-9.997,85.240)
N6: (38.445,-13.966,84.181)
N7: (36.489,-12.224,82.721)
N9: (36.148,-10.101,83.363)
O5': (38.294,-6.678,85.029)
O3': (34.451,-6.485,85.951)
Image (generated by PyMOL):