Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A492:A500
Extra
PDB:
ATOM 1 O3' G A 491 11.996 167.712 63.613 1.00 64.01 O
ATOM 2 P G A 492 11.633 166.411 62.739 1.00 64.22 P
ATOM 3 OP1 G A 492 10.274 166.657 62.202 1.00 65.56 O
ATOM 4 OP2 G A 492 11.895 165.168 63.509 1.00 64.95 O
ATOM 5 O5' G A 492 12.647 166.481 61.515 1.00 62.60 O
ATOM 6 C5' G A 492 12.501 167.486 60.491 1.00 61.96 C
ATOM 7 C4' G A 492 13.548 167.293 59.417 1.00 61.39 C
ATOM 8 O4' G A 492 14.867 167.490 59.997 1.00 62.36 O
ATOM 9 C3' G A 492 13.622 165.897 58.812 1.00 60.81 C
ATOM 10 O3' G A 492 12.673 165.690 57.783 1.00 58.03 O
ATOM 11 C2' G A 492 15.045 165.854 58.290 1.00 61.83 C
ATOM 12 O2' G A 492 15.192 166.574 57.086 1.00 62.01 O
ATOM 13 C1' G A 492 15.781 166.566 59.426 1.00 63.43 C
ATOM 14 N9 G A 492 16.192 165.614 60.458 1.00 65.15 N
ATOM 15 C8 G A 492 15.723 165.504 61.752 1.00 65.69 C
ATOM 16 N7 G A 492 16.283 164.531 62.418 1.00 65.05 N
ATOM 17 C5 G A 492 17.176 163.966 61.509 1.00 64.82 C
ATOM 18 C6 G A 492 18.068 162.882 61.651 1.00 63.93 C
ATOM 19 O6 G A 492 18.238 162.156 62.631 1.00 64.44 O
ATOM 20 N1 G A 492 18.808 162.668 60.489 1.00 63.43 N
ATOM 21 C2 G A 492 18.697 163.399 59.331 1.00 63.93 C
ATOM 22 N2 G A 492 19.516 163.068 58.320 1.00 63.09 N
ATOM 23 N3 G A 492 17.850 164.393 59.178 1.00 64.44 N
ATOM 24 C4 G A 492 17.133 164.627 60.300 1.00 64.87 C
ATOM 25 P C A 493 12.093 164.214 57.518 1.00 57.28 P
ATOM 26 OP1 C A 493 10.990 164.379 56.557 1.00 58.55 O
ATOM 27 OP2 C A 493 11.849 163.507 58.808 1.00 58.10 O
ATOM 28 O5' C A 493 13.255 163.483 56.729 1.00 54.49 O
TER
ATOM 1 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 2 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 3 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 4 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 5 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
ATOM 6 C5' G B 500 25.488 154.390 61.609 1.00 54.59 C
ATOM 7 C4' G B 500 26.231 155.692 61.569 1.00 56.39 C
ATOM 8 O4' G B 500 25.420 156.675 60.882 1.00 57.59 O
ATOM 9 C3' G B 500 26.562 156.298 62.926 1.00 58.03 C
ATOM 10 O3' G B 500 27.772 157.007 62.794 1.00 59.90 O
ATOM 11 C2' G B 500 25.444 157.304 63.138 1.00 58.22 C
ATOM 12 O2' G B 500 25.824 158.380 63.974 1.00 57.35 O
ATOM 13 C1' G B 500 25.250 157.803 61.714 1.00 59.08 C
ATOM 14 N9 G B 500 23.947 158.397 61.443 1.00 59.74 N
ATOM 15 C8 G B 500 22.857 158.465 62.280 1.00 59.62 C
ATOM 16 N7 G B 500 21.857 159.119 61.757 1.00 60.71 N
ATOM 17 C5 G B 500 22.309 159.488 60.496 1.00 60.15 C
ATOM 18 C6 G B 500 21.669 160.230 59.463 1.00 59.83 C
ATOM 19 O6 G B 500 20.535 160.721 59.452 1.00 60.18 O
ATOM 20 N1 G B 500 22.497 160.384 58.357 1.00 59.74 N
ATOM 21 C2 G B 500 23.777 159.902 58.257 1.00 60.04 C
ATOM 22 N2 G B 500 24.440 160.199 57.128 1.00 60.96 N
ATOM 23 N3 G B 500 24.375 159.196 59.199 1.00 59.90 N
ATOM 24 C4 G B 500 23.591 159.037 60.285 1.00 59.51 C
ATOM 25 P A B 501 28.948 156.758 63.846 1.00 61.89 P
ATOM 26 OP1 A B 501 28.488 155.716 64.805 1.00 58.66 O
ATOM 27 OP2 A B 501 29.383 158.080 64.344 1.00 62.17 O
ATOM 28 O5' A B 501 30.122 156.154 62.965 1.00 61.01 O
TER
ATOM 2 P G A 492 11.633 166.411 62.739 1.00 64.22 P
ATOM 3 OP1 G A 492 10.274 166.657 62.202 1.00 65.56 O
ATOM 4 OP2 G A 492 11.895 165.168 63.509 1.00 64.95 O
ATOM 5 O5' G A 492 12.647 166.481 61.515 1.00 62.60 O
ATOM 6 C5' G A 492 12.501 167.486 60.491 1.00 61.96 C
ATOM 7 C4' G A 492 13.548 167.293 59.417 1.00 61.39 C
ATOM 8 O4' G A 492 14.867 167.490 59.997 1.00 62.36 O
ATOM 9 C3' G A 492 13.622 165.897 58.812 1.00 60.81 C
ATOM 10 O3' G A 492 12.673 165.690 57.783 1.00 58.03 O
ATOM 11 C2' G A 492 15.045 165.854 58.290 1.00 61.83 C
ATOM 12 O2' G A 492 15.192 166.574 57.086 1.00 62.01 O
ATOM 13 C1' G A 492 15.781 166.566 59.426 1.00 63.43 C
ATOM 14 N9 G A 492 16.192 165.614 60.458 1.00 65.15 N
ATOM 15 C8 G A 492 15.723 165.504 61.752 1.00 65.69 C
ATOM 16 N7 G A 492 16.283 164.531 62.418 1.00 65.05 N
ATOM 17 C5 G A 492 17.176 163.966 61.509 1.00 64.82 C
ATOM 18 C6 G A 492 18.068 162.882 61.651 1.00 63.93 C
ATOM 19 O6 G A 492 18.238 162.156 62.631 1.00 64.44 O
ATOM 20 N1 G A 492 18.808 162.668 60.489 1.00 63.43 N
ATOM 21 C2 G A 492 18.697 163.399 59.331 1.00 63.93 C
ATOM 22 N2 G A 492 19.516 163.068 58.320 1.00 63.09 N
ATOM 23 N3 G A 492 17.850 164.393 59.178 1.00 64.44 N
ATOM 24 C4 G A 492 17.133 164.627 60.300 1.00 64.87 C
ATOM 25 P C A 493 12.093 164.214 57.518 1.00 57.28 P
ATOM 26 OP1 C A 493 10.990 164.379 56.557 1.00 58.55 O
ATOM 27 OP2 C A 493 11.849 163.507 58.808 1.00 58.10 O
ATOM 28 O5' C A 493 13.255 163.483 56.729 1.00 54.49 O
TER
ATOM 1 O3' A B 499 23.664 152.115 62.602 1.00 57.28 O
ATOM 2 P G B 500 23.853 153.465 63.442 1.00 55.81 P
ATOM 3 OP1 G B 500 24.997 153.239 64.352 1.00 56.82 O
ATOM 4 OP2 G B 500 22.534 153.861 64.009 1.00 55.23 O
ATOM 5 O5' G B 500 24.282 154.543 62.353 1.00 54.07 O
ATOM 6 C5' G B 500 25.488 154.390 61.609 1.00 54.59 C
ATOM 7 C4' G B 500 26.231 155.692 61.569 1.00 56.39 C
ATOM 8 O4' G B 500 25.420 156.675 60.882 1.00 57.59 O
ATOM 9 C3' G B 500 26.562 156.298 62.926 1.00 58.03 C
ATOM 10 O3' G B 500 27.772 157.007 62.794 1.00 59.90 O
ATOM 11 C2' G B 500 25.444 157.304 63.138 1.00 58.22 C
ATOM 12 O2' G B 500 25.824 158.380 63.974 1.00 57.35 O
ATOM 13 C1' G B 500 25.250 157.803 61.714 1.00 59.08 C
ATOM 14 N9 G B 500 23.947 158.397 61.443 1.00 59.74 N
ATOM 15 C8 G B 500 22.857 158.465 62.280 1.00 59.62 C
ATOM 16 N7 G B 500 21.857 159.119 61.757 1.00 60.71 N
ATOM 17 C5 G B 500 22.309 159.488 60.496 1.00 60.15 C
ATOM 18 C6 G B 500 21.669 160.230 59.463 1.00 59.83 C
ATOM 19 O6 G B 500 20.535 160.721 59.452 1.00 60.18 O
ATOM 20 N1 G B 500 22.497 160.384 58.357 1.00 59.74 N
ATOM 21 C2 G B 500 23.777 159.902 58.257 1.00 60.04 C
ATOM 22 N2 G B 500 24.440 160.199 57.128 1.00 60.96 N
ATOM 23 N3 G B 500 24.375 159.196 59.199 1.00 59.90 N
ATOM 24 C4 G B 500 23.591 159.037 60.285 1.00 59.51 C
ATOM 25 P A B 501 28.948 156.758 63.846 1.00 61.89 P
ATOM 26 OP1 A B 501 28.488 155.716 64.805 1.00 58.66 O
ATOM 27 OP2 A B 501 29.383 158.080 64.344 1.00 62.17 O
ATOM 28 O5' A B 501 30.122 156.154 62.965 1.00 61.01 O
TER
Atoms:
OP1: (10.274,166.657,62.202)
OP2: (11.895,165.168,63.509)
C3': (13.622,165.897,58.812)
C1': (15.781,166.566,59.426)
C5': (12.501,167.486,60.491)
O6: (18.238,162.156,62.631)
O4': (14.867,167.490,59.997)
C8: (15.723,165.504,61.752)
C2: (18.697,163.399,59.331)
C6: (18.068,162.882,61.651)
C5: (17.176,163.966,61.509)
C4: (17.133,164.627,60.300)
P: (11.633,166.411,62.739)
C4': (13.548,167.293,59.417)
C2': (15.045,165.854,58.290)
O2': (15.192,166.574,57.086)
N1: (18.808,162.668,60.489)
N2: (19.516,163.068,58.320)
N3: (17.850,164.393,59.178)
N7: (16.283,164.531,62.418)
N9: (16.192,165.614,60.458)
O5': (12.647,166.481,61.515)
O3': (12.673,165.690,57.783)
OP2: (11.895,165.168,63.509)
C3': (13.622,165.897,58.812)
C1': (15.781,166.566,59.426)
C5': (12.501,167.486,60.491)
O6: (18.238,162.156,62.631)
O4': (14.867,167.490,59.997)
C8: (15.723,165.504,61.752)
C2: (18.697,163.399,59.331)
C6: (18.068,162.882,61.651)
C5: (17.176,163.966,61.509)
C4: (17.133,164.627,60.300)
P: (11.633,166.411,62.739)
C4': (13.548,167.293,59.417)
C2': (15.045,165.854,58.290)
O2': (15.192,166.574,57.086)
N1: (18.808,162.668,60.489)
N2: (19.516,163.068,58.320)
N3: (17.850,164.393,59.178)
N7: (16.283,164.531,62.418)
N9: (16.192,165.614,60.458)
O5': (12.647,166.481,61.515)
O3': (12.673,165.690,57.783)
OP1: (24.997,153.239,64.352)
OP2: (22.534,153.861,64.009)
C3': (26.562,156.298,62.926)
C1': (25.250,157.803,61.714)
C5': (25.488,154.390,61.609)
O6: (20.535,160.721,59.452)
O4': (25.420,156.675,60.882)
C8: (22.857,158.465,62.280)
C2: (23.777,159.902,58.257)
C6: (21.669,160.230,59.463)
C5: (22.309,159.488,60.496)
C4: (23.591,159.037,60.285)
P: (23.853,153.465,63.442)
C4': (26.231,155.692,61.569)
C2': (25.444,157.304,63.138)
O2': (25.824,158.380,63.974)
N1: (22.497,160.384,58.357)
N2: (24.440,160.199,57.128)
N3: (24.375,159.196,59.199)
N7: (21.857,159.119,61.757)
N9: (23.947,158.397,61.443)
O5': (24.282,154.543,62.353)
O3': (27.772,157.007,62.794)
OP2: (22.534,153.861,64.009)
C3': (26.562,156.298,62.926)
C1': (25.250,157.803,61.714)
C5': (25.488,154.390,61.609)
O6: (20.535,160.721,59.452)
O4': (25.420,156.675,60.882)
C8: (22.857,158.465,62.280)
C2: (23.777,159.902,58.257)
C6: (21.669,160.230,59.463)
C5: (22.309,159.488,60.496)
C4: (23.591,159.037,60.285)
P: (23.853,153.465,63.442)
C4': (26.231,155.692,61.569)
C2': (25.444,157.304,63.138)
O2': (25.824,158.380,63.974)
N1: (22.497,160.384,58.357)
N2: (24.440,160.199,57.128)
N3: (24.375,159.196,59.199)
N7: (21.857,159.119,61.757)
N9: (23.947,158.397,61.443)
O5': (24.282,154.543,62.353)
O3': (27.772,157.007,62.794)
Image (generated by PyMOL):